tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.117395 (49 seq.)
>W1710815609 LKKK01000015 Gammaproteobacteria Pseudomonas sp. TTU2014-080ASC [LKKK] 56009 56095 + Leu CAG [ENA] ¡û
>W1710815610 LKKK01000015 Gammaproteobacteria Pseudomonas sp. TTU2014-080ASC [LKKK] 56174 56260 + Leu CAG [ENA] ¡û
>W1711089354 LSZO01000071 Gammaproteobacteria Ventosimonas gracilis [LSZO] 20072 20158 + Leu CAG [ENA] ¡û
>W131210502 ATKM01000005 Gammaproteobacteria Pseudomonas sp. P818 [ATKM] 290652 290566 - Leu CAG [ENA] ¡û
>W131210503 ATKM01000005 Gammaproteobacteria Pseudomonas sp. P818 [ATKM] 290428 290342 - Leu CAG [ENA] ¡û
>C017221 CP000680 Gammaproteobacteria Pseudomonas mendocina [CP000680] 711604 711518 - Leu CAG [Ensembl] ¡û
>C017222 CP000680 Gammaproteobacteria Pseudomonas mendocina [CP000680] 711435 711349 - Leu CAG [Ensembl] ¡û
>W141104342 AVOF01000109 Gammaproteobacteria Pseudomonas sp. EGD-AK9 [AVOF] 480 394 - Leu CAG [ENA] ¡û
>W141104343 AVOF01000109 Gammaproteobacteria Pseudomonas sp. EGD-AK9 [AVOF] 309 223 - Leu CAG [ENA] ¡û
>WENV181415885 OGCL01032702 [OGCL] hot springs metagenome; Hot spring water 154 240 + Leu CAG [ENA] ¢þ
>WENV170356680 CETJ01058013 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3012 3098 + Leu CAG [ENA] ¢þ
>WENV170408333 CEUI01015336 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 33989 33903 - Leu CAG [ENA] ¢þ
>WENV170408334 CEUI01015336 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 33822 33736 - Leu CAG [ENA] ¢þ
>WENV170423845 CEUO01033429 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 624 538 - Leu CAG [ENA] ¢þ
>WENV170423846 CEUO01033429 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 457 371 - Leu CAG [ENA] ¢þ
>WENV170436134 CEUT01024390 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2814 2900 + Leu CAG [ENA] ¢þ
>WENV170436135 CEUT01024390 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2981 3067 + Leu CAG [ENA] ¢þ
>WENV170443701 CEUX01002477 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3166 3252 + Leu CAG [ENA] ¢þ
>WENV170458068 CEVB01029883 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1141 1055 - Leu CAG [ENA] ¢þ
>WENV170458069 CEVB01029883 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 974 888 - Leu CAG [ENA] ¢þ
>WENV170520817 CEWF01016467 [CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 126 212 + Leu CAG [ENA] ¢þ
>WENV170706551 LNAP01004170 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 10937 10851 - Leu CAG [ENA] ¢þ
>WENV170834035 MDSZ01090752 [MDSZ] marine metagenome; seawater 103 17 - Leu CAG [ENA] ¢þ
>WENV170834195 MDSZ01093554 [MDSZ] marine metagenome; seawater 1 87 + Leu CAG [ENA] ¢þ
>WENV170965233 MTET01004962 [MTET] soil metagenome; garden soil control 3780 3866 + Leu CAG [ENA] ¢þ
>WENV170965453 MTEU01002623 [MTEU] soil metagenome; naturally attenuated soil 4038 4124 + Leu CAG [ENA] ¢þ
>WENV170965608 MTEU01004896 [MTEU] soil metagenome; naturally attenuated soil 4369 4283 - Leu CAG [ENA] ¢þ
>WENV170965824 MTEV01005735 [MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine 87 1 - Leu CAG [ENA] ¢þ
>WENV170966375 MTEX01008190 [MTEX] soil metagenome; soil biostimulated with molasses as carbon source 3780 3866 + Leu CAG [ENA] ¢þ
>C181087999 CP023641 Gammaproteobacteria Pseudomonas mendocina MAE1-K [CP023641] 4747285 4747371 + Leu CAG - ¡û
>C181088000 CP023641 Gammaproteobacteria Pseudomonas mendocina MAE1-K [CP023641] 4747455 4747541 + Leu CAG - ¡û
>C191204383 LR134290 Gammaproteobacteria Pseudomonas mendocina NCTC10897 [LR134290] 795900 795814 - Leu CAG - ¡û
>W09106309 AAUL01000004 Gammaproteobacteria Pseudomonas mendocina ymp [AAUL] 245082 244996 - Leu CAG [ENA] ¡û
>W09106310 AAUL01000004 Gammaproteobacteria Pseudomonas mendocina ymp [AAUL] 244913 244827 - Leu CAG [ENA] ¡û
>W1911071664 NMQV01000029 Gammaproteobacteria Pseudomonas fluvialis ASS-1 [NMQV] 19844 19930 + Leu CAG [ENA] ¡û
>W1911071665 NMQV01000029 Gammaproteobacteria Pseudomonas fluvialis ASS-1 [NMQV] 20043 20129 + Leu CAG [ENA] ¡û
>W1810154129 PIYS01000027 Gammaproteobacteria Pseudomonas pharmacofabricae ZYSR67-Z [PIYS] 112387 112301 - Leu CAG [ENA] ¡û
>W1810154130 PIYS01000027 Gammaproteobacteria Pseudomonas pharmacofabricae ZYSR67-Z [PIYS] 112188 112102 - Leu CAG [ENA] ¡û
>W1510014595 BBQC01000002 Gammaproteobacteria Pseudomonas mendocina NBRC 14162 [BBQC] 582076 581990 - Leu CAG [ENA] ¡û
>W121112407 ALKM01000020 Gammaproteobacteria Pseudomonas mendocina DLHK [ALKM] 547 633 + Leu CAG [ENA] ¡û
>W121112408 ALKM01000020 Gammaproteobacteria Pseudomonas mendocina DLHK [ALKM] 718 804 + Leu CAG [ENA] ¡û
>W1610679706 LKKK01000015 Gammaproteobacteria Pseudomonas sp. TTU2014-080ASC [LKKK] 56009 56095 + Leu CAG [ENA] ¡û
>W1610679707 LKKK01000015 Gammaproteobacteria Pseudomonas sp. TTU2014-080ASC [LKKK] 56174 56260 + Leu CAG [ENA] ¡û
>W1610923732 LSZO01000071 Gammaproteobacteria Ventosimonas gracilis [LSZO] 20072 20158 + Leu CAG [ENA] ¡û
>W1710525219 FNJJ01000002 Gammaproteobacteria Pseudomonas guguanensis [FNJJ] 467929 468015 + Leu CAG [ENA] ¡û
>W1710525220 FNJJ01000002 Gammaproteobacteria Pseudomonas guguanensis [FNJJ] 468099 468185 + Leu CAG [ENA] ¡û
>W1710542460 FNZE01000001 Gammaproteobacteria Pseudomonas linyingensis [FNZE] 109926 109840 - Leu CAG [ENA] ¡û
>W1710572302 FOWP01000001 Gammaproteobacteria Pseudomonas composti [FOWP] 467586 467672 + Leu CAG [ENA] ¡û
>W1710573419 FOXM01000001 Gammaproteobacteria Pseudomonas sagittaria [FOXM] 366053 366139 + Leu CAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK