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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.117786 (130 seq.)
>W1710872021
LMLR01000001
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
902672
902590
-
Leu
TAG
[ENA]
¡û
>W1710875392
LMOI01000024
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
252469
252387
-
Leu
TAG
[ENA]
¡û
>W1710875599
LMON01000001
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
923194
923110
-
Leu
TAG
[ENA]
¡û
>W1710876267
LMPC01000001
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
134739
134821
+
Leu
TAG
[ENA]
¡û
>W1710880030
LMSB01000016
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
59596
59680
+
Leu
TAG
[ENA]
¡û
>W1710880245
LMSF01000001
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
296550
296634
+
Leu
TAG
[ENA]
¡û
>W1710880336
LMSG01000023
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
85423
85505
+
Leu
TAG
[ENA]
¡û
>W1710880370
LMSH01000002
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
1100021
1099939
-
Leu
TAG
[ENA]
¡û
>W1710880420
LMSI01000020
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
538684
538600
-
Leu
TAG
[ENA]
¡û
>W1710909425
LNQM01000001
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
941596
941514
-
Leu
TAG
[ENA]
¡û
>W1710916080
LNUT01000001
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
28338
28256
-
Leu
TAG
[ENA]
¡û
>W1710916215
LNUV01000004
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
125686
125604
-
Leu
TAG
[ENA]
¡û
>W1710995765
LQAP01000016
Actinomycetota
Arthrobacter sp. B6 [LQAP]
21506
21588
+
Leu
TAG
[ENA]
¡û
>W1711124378
LUKB01000031
Actinomycetota
Arthrobacter sp. D2 [LUKB]
323080
323162
+
Leu
TAG
[ENA]
¡û
>W1711124436
LUKC01000041
Actinomycetota
Arthrobacter sp. D4 [LUKC]
323080
323162
+
Leu
TAG
[ENA]
¡û
>W1711184066
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
2797763
2797845
+
Leu
TAG
[ENA]
¡û
>W1711466012
MJLT01000001
Actinomycetota
Arthrobacter sp. SW1 [MJLT]
242501
242585
+
Leu
TAG
[ENA]
¡û
>W1711724093
MTPV01000068
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
12565
12483
-
Leu
TAG
[ENA]
¡û
>W1711768807
MVDG01000013
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
195021
195105
+
Leu
TAG
[ENA]
¡û
>W1711853227
MYFE01000310
Actinomycetota
Arthrobacter globiformis [MYFE]
2428
2344
-
Leu
TAG
[ENA]
¡û
>C171040605
CP015732
Actinomycetota
Arthrobacter sp. U41 [CP015732]
4082703
4082787
+
Leu
TAG
-
¡û
>C171062267
CP017421
Actinomycetota
Arthrobacter sp. ZXY-2 [CP017421]
1214668
1214586
-
Leu
TAG
-
¡û
>C171092006
CP019304
Actinomycetota
Arthrobacter sp. QXT-31 [CP019304]
4132677
4132593
-
Leu
TAG
-
¡û
>W131089922
AOFD01000004
Actinomycetota
Arthrobacter nitrophenolicus SJCon [AOFD]
74115
74033
-
Leu
TAG
[ENA]
¡û
>W131172060
ARGQ01000037
Actinomycetota
Arthrobacter sp. 135MFCol5.1 [ARGQ]
91474
91556
+
Leu
TAG
[ENA]
¡û
>W131172193
ARGS01000055
Actinomycetota
Arthrobacter sp. 162MFSha1.1 [ARGS]
91998
92082
+
Leu
TAG
[ENA]
¡û
>W131172240
ARGT01000029
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
917355
917437
+
Leu
TAG
[ENA]
¡û
>W131172288
ARGU01000044
Actinomycetota
Arthrobacter sp. 161MFSha2.1 [ARGU]
95057
95141
+
Leu
TAG
[ENA]
¡û
>W131237745
AUPJ01000548
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
16199
16117
-
Leu
TAG
[ENA]
¡û
>C000064
CP000474
Actinomycetota
Paenarthrobacter aurescens TC1 [CP000474]
2766406
2766487
+
Leu
TAG
[Ensembl]
¡û
>C001004
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
2856320
2856401
+
Leu
TAG
[Ensembl]
¡û
>WENV180019653
FTCF01000280
[FTCF] metagenome; soil
1535
1618
+
Leu
TAG
[ENA]
¢þ
>WENV180035316
FTKT01166191
[FTKT] metagenome; soil
306
224
-
Leu
TAG
[ENA]
¢þ
>W141065973
AQRI01000002
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
66328
66410
+
Leu
TAG
[ENA]
¡û
>W141106058
AVPD01000002
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
189187
189269
+
Leu
TAG
[ENA]
¡û
>WENV181191957
OEPS010307061
[OEPS] soil metagenome; soil
90
172
+
Leu
TAG
[ENA]
¢þ
>W08008088
ABKU01000193
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [ABKU]
1831
1749
-
Leu
TAG
[ENA]
¡û
>W141213539
AZSB01000436
Actinomycetota
Arthrobacter sp. I3 [AZSB]
8123
8205
+
Leu
TAG
[ENA]
¡û
>W141216712
AZVC01000001
Actinomycetota
Paenarthrobacter nicotinovorans 231Sha2.1M6 [AZVC]
675750
675668
-
Leu
TAG
[ENA]
¡û
>W141217123
AZVJ01000001
Actinomycetota
Paenarthrobacter nicotinovorans 26Cvi1.1E [AZVJ]
95429
95511
+
Leu
TAG
[ENA]
¡û
>W141246958
CAQI01000039
Actinomycetota
Pseudarthrobacter siccitolerans [CAQI]
88548
88466
-
Leu
TAG
[ENA]
¡û
>W141278850
JAFW01000001
Actinomycetota
Arthrobacter sp. 31Y [JAFW]
557604
557686
+
Leu
TAG
[ENA]
¡û
>C181000313
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
2230770
2230853
+
Leu
TAG
-
¡û
>C181064970
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
3216357
3216439
+
Leu
TAG
-
¡û
>C181134218
CP026514
Actinomycetota
Arthrobacter sp. PGP41 [CP026514]
2693807
2693889
+
Leu
TAG
-
¡û
>C191164649
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
2019249
2019167
-
Leu
TAG
-
¡û
>C191174055
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
3581193
3581275
+
Leu
TAG
-
¡û
>C191188249
CP041187
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502771 [CP041187]
2763978
2763896
-
Leu
TAG
-
¡û
>C191188282
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
3440480
3440562
+
Leu
TAG
-
¡û
>C191188526
CP041198
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502770 [CP041198]
2035967
2036049
+
Leu
TAG
-
¡û
>W141565218
JIBJ01000019
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
44456
44538
+
Leu
TAG
[ENA]
¡û
>W09102049
AAHG01000006
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
125734
125816
+
Leu
TAG
[ENA]
¡û
>W141702028
JMLE01000016
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
12085
12001
-
Leu
TAG
[ENA]
¡û
>W141766554
JOEB01000002
Actinomycetota
Mycetocola saprophilus [JOEB]
266312
266396
+
Leu
TAG
[ENA]
¡û
>W141766641
JOEC01000002
Actinomycetota
Mycetocola saprophilus [JOEC]
1175705
1175621
-
Leu
TAG
[ENA]
¡û
>W1910181573
BJMD01000006
Actinomycetota
Paenarthrobacter aurescens NBRC 12136 [BJMD]
234261
234179
-
Leu
TAG
[ENA]
¡û
>C09100268
CP001341
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [CP001341]
2566262
2566344
+
Leu
TAG
[Ensembl]
¡û
>W1911532751
OIVI01000360
Actinomycetota
Arthrobacter alpinus [OIVI]
82839
82921
+
Leu
TAG
[ENA]
¡û
>W1911566809
PCPC01000017
Actinomycetota
Arthrobacter sp. MYb51 [PCPC]
94732
94814
+
Leu
TAG
[ENA]
¡û
>W1911567549
PCPR01000002
Actinomycetota
Arthrobacter sp. MYb23 [PCPR]
94732
94814
+
Leu
TAG
[ENA]
¡û
>W1911798216
QYLP01000009
Actinomycetota
Arthrobacter celericrescens NEAU-SA2 [QYLP]
10635
10719
+
Leu
TAG
[ENA]
¡û
>W1810167226
PJII01000001
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
81427
81509
+
Leu
TAG
[ENA]
¡û
>W1810167325
PJIK01000001
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
88400
88482
+
Leu
TAG
[ENA]
¡û
>W1810167417
PJIL01000016
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
25998
25916
-
Leu
TAG
[ENA]
¡û
>W1810167864
PJIV01000002
Actinomycetota
Arthrobacter sp. 9E14 [PJIV]
87006
87088
+
Leu
TAG
[ENA]
¡û
>W1810167924
PJIW01000005
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
180620
180538
-
Leu
TAG
[ENA]
¡û
>W1810171940
PJMB01000001
Actinomycetota
Arthrobacter sp. AFG7.2 [PJMB]
83087
83169
+
Leu
TAG
[ENA]
¡û
>W1810171999
PJMC01000005
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
270634
270552
-
Leu
TAG
[ENA]
¡û
>W1810296155
PTJB01000007
Actinomycetota
Arthrobacter sp. B3 [PTJB]
138850
138767
-
Leu
TAG
[ENA]
¡û
>W1810368335
PVZO01000003
Actinomycetota
Arthrobacter woluwensis NM-35 [PVZO]
134814
134730
-
Leu
TAG
[ENA]
¡û
>W1810424177
PYUI01000007
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
72403
72321
-
Leu
TAG
[ENA]
¡û
>W1810474983
QAIQ01000592
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
10523
10605
+
Leu
TAG
[ENA]
¡û
>W1810569971
QEHL01000008
Actinomycetota
Pseudarthrobacter sp. AG30 [QEHL]
92731
92814
+
Leu
TAG
[ENA]
¡û
>W1810676790
QKMG01000001
Actinomycetota
Paenarthrobacter nicotinovorans 25_8 [QKMG]
915167
915085
-
Leu
TAG
[ENA]
¡û
>W1810677227
QKMO01000001
Actinomycetota
Arthrobacter sp. RC1.1 241 [QKMO]
329156
329238
+
Leu
TAG
[ENA]
¡û
>W1810695581
QLNP01000105
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
292255
292173
-
Leu
TAG
[ENA]
¡û
>W1810707053
QMKP01000007
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
147660
147578
-
Leu
TAG
[ENA]
¡û
>W1810786771
QRCU01000043
Actinomycetota
Arthrobacter silvisoli NEAU-SA1 [QRCU]
60043
59959
-
Leu
TAG
[ENA]
¡û
>W1810789455
QRGQ01000019
Actinomycetota
Arthrobacter sp. RT-1 [QRGQ]
79632
79716
+
Leu
TAG
[ENA]
¡û
>W1510018493
BBUD01000164
Actinomycetota
Arthrobacter sp. Hiyo1 [BBUD]
5053
4971
-
Leu
TAG
[ENA]
¡û
>W1510018543
BBUE01000246
Actinomycetota
Arthrobacter sp. Hiyo6 [BBUE]
3213
3295
+
Leu
TAG
[ENA]
¡û
>C11101002
CP002379
Actinomycetota
Pseudarthrobacter phenanthrenivorans Sphe3 [CP002379]
2561518
2561602
+
Leu
TAG
[Ensembl]
¡û
>W1510641770
CVLG01000002
Actinomycetota
Paenarthrobacter nitroguajacolicus HG [CVLG]
354518
354600
+
Leu
TAG
[ENA]
¡û
>W1511319639
JPZK01000029
Actinomycetota
Arthrobacter sp. MWB30 [JPZK]
26118
26202
+
Leu
TAG
[ENA]
¡û
>W1511489626
JWTB01000024
Actinomycetota
Pseudarthrobacter phenanthrenivorans SWC37 [JWTB]
91403
91485
+
Leu
TAG
[ENA]
¡û
>W1511523740
JYCN01000020
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
19628
19710
+
Leu
TAG
[ENA]
¡û
>W1511551627
JZTW01000005
Actinomycetota
Pseudarthrobacter chlorophenolicus Mor30.16 [JZTW]
145564
145482
-
Leu
TAG
[ENA]
¡û
>W1511685689
LFQH01000041
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
3257
3339
+
Leu
TAG
[ENA]
¡û
>C161001331
AP014719
Actinomycetota
Arthrobacter sp. Hiyo8 [AP014719]
4129226
4129144
-
Leu
TAG
-
¡û
>C161060740
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
4201797
4201715
-
Leu
TAG
[Ensembl]
¡û
>C161068062
CP014196
Actinomycetota
Arthrobacter sp. ATCC 21022 [CP014196]
2758698
2758780
+
Leu
TAG
-
¡û
>W121086822
AKKK01000029
Actinomycetota
Arthrobacter sp. M2012083 [AKKK]
11909
11827
-
Leu
TAG
[ENA]
¡û
>W121123831
BAEG01000096
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
6249
6333
+
Leu
TAG
[ENA]
¡û
>W1610067332
BCQN01000001
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
273145
273229
+
Leu
TAG
[ENA]
¡û
>W1610081874
BDDW01000001
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
940040
939956
-
Leu
TAG
[ENA]
¡û
>C131002313
CP003203
Actinomycetota
Arthrobacter sp. Rue61a [CP003203]
2945397
2945479
+
Leu
TAG
[Ensembl]
¡û
>W1610515407
FMAZ01000001
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
941596
941514
-
Leu
TAG
[ENA]
¡û
>W1610527118
JPWK01000008
Actinomycetota
Arthrobacter sp. ATCC 21022 ATCC 21022 KY 3901 [JPWK]
291471
291389
-
Leu
TAG
[ENA]
¡û
>W1610734367
LMLR01000001
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
902672
902590
-
Leu
TAG
[ENA]
¡û
>W1610737738
LMOI01000024
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
252469
252387
-
Leu
TAG
[ENA]
¡û
>W1610737945
LMON01000001
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
923194
923110
-
Leu
TAG
[ENA]
¡û
>W1610738613
LMPC01000001
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
134739
134821
+
Leu
TAG
[ENA]
¡û
>W1610742376
LMSB01000016
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
59596
59680
+
Leu
TAG
[ENA]
¡û
>W1610742591
LMSF01000001
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
296550
296634
+
Leu
TAG
[ENA]
¡û
>W1610742682
LMSG01000023
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
85423
85505
+
Leu
TAG
[ENA]
¡û
>W1610742716
LMSH01000002
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
1100021
1099939
-
Leu
TAG
[ENA]
¡û
>W1610742766
LMSI01000020
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
538684
538600
-
Leu
TAG
[ENA]
¡û
>W1610767784
LNQM01000001
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
941596
941514
-
Leu
TAG
[ENA]
¡û
>W1610774319
LNUT01000001
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
28338
28256
-
Leu
TAG
[ENA]
¡û
>W1610774454
LNUV01000004
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
125686
125604
-
Leu
TAG
[ENA]
¡û
>W1610850422
LQAP01000016
Actinomycetota
Arthrobacter sp. B6 [LQAP]
21506
21588
+
Leu
TAG
[ENA]
¡û
>W1610989948
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
2797763
2797845
+
Leu
TAG
[ENA]
¡û
>W1710064705
BCQN01000001
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
273145
273229
+
Leu
TAG
[ENA]
¡û
>W1710080589
BDDW01000001
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
940040
939956
-
Leu
TAG
[ENA]
¡û
>W1710084521
BDMH01000008
Actinomycetota
Paenarthrobacter ureafaciens KI72 [BDMH]
80759
80841
+
Leu
TAG
[ENA]
¡û
>W1710501097
FMAZ01000001
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
941596
941514
-
Leu
TAG
[ENA]
¡û
>W1710508492
FMWE01000001
Actinomycetota
Arthrobacter sp. UNCCL28 [FMWE]
921948
921866
-
Leu
TAG
[ENA]
¡û
>W1710518926
FNEI01000011
Actinomycetota
Arthrobacter cupressi [FNEI]
125180
125096
-
Leu
TAG
[ENA]
¡û
>W1710521102
FNGC01000019
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
61265
61347
+
Leu
TAG
[ENA]
¡û
>W1710521133
FNGD01000008
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
158668
158586
-
Leu
TAG
[ENA]
¡û
>W1710525668
FNJS01000016
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
87240
87158
-
Leu
TAG
[ENA]
¡û
>W1710527685
FNLE01000003
Actinomycetota
Pseudarthrobacter chlorophenolicus [FNLE]
2620796
2620714
-
Leu
TAG
[ENA]
¡û
>W1710529000
FNNR01000002
Actinomycetota
Arthrobacter sp. cf158 [FNNR]
544612
544530
-
Leu
TAG
[ENA]
¡û
>W1710535428
FNSN01000003
Actinomycetota
Arthrobacter woluwensis [FNSN]
1624808
1624724
-
Leu
TAG
[ENA]
¡û
>W1710541432
FNYI01000001
Actinomycetota
Arthrobacter sp. yr096 [FNYI]
956151
956069
-
Leu
TAG
[ENA]
¡û
>W1710550069
FOEZ01000001
Actinomycetota
Arthrobacter sp. OV608 [FOEZ]
501496
501414
-
Leu
TAG
[ENA]
¡û
>W1710577622
FPAY01000002
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
14194
14112
-
Leu
TAG
[ENA]
¡û
>W1710603415
FUZB01000001
Actinomycetota
Arthrobacter sp. 31Cvi3.1E [FUZB]
25863
25947
+
Leu
TAG
[ENA]
¡û
>W1710603526
FUZD01000010
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
121344
121426
+
Leu
TAG
[ENA]
¡û
>W1710605039
FVZL01000008
Actinomycetota
Arthrobacter sp. P2b [FVZL]
138850
138766
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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