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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.118195 (202 seq.)
>W1710776026
LIZH01000459
Betaproteobacteria
Duganella sp. Ant L27C-9 [LIZH]
29054
28970
-
Leu
GAG
[ENA]
¡û
>W1710860683
LMDB01000036
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
117566
117650
+
Leu
GAG
[ENA]
¡û
>W1710861081
LMDJ01000033
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
80580
80664
+
Leu
GAG
[ENA]
¡û
>W1710862045
LMEC01000020
Betaproteobacteria
Massilia sp. Root418 [LMEC]
1098620
1098536
-
Leu
GAG
[ENA]
¡û
>W1710864559
LMFZ01000001
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
351473
351389
-
Leu
GAG
[ENA]
¡û
>W1710867254
LMIC01000051
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
10140
10224
+
Leu
GAG
[ENA]
¡û
>W1710871793
LMLM01000028
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
199876
199960
+
Leu
GAG
[ENA]
¡û
>W1710874793
LMNW01000035
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
23355
23271
-
Leu
GAG
[ENA]
¡û
>W1710890948
LNCE01000178
Betaproteobacteria
Janthinobacterium sp. Ant5-2-1 [LNCE]
122238
122322
+
Leu
GAG
[ENA]
¡û
>W1710906981
LNOL01000016
Betaproteobacteria
Alcaligenes faecalis [LNOL]
39257
39341
+
Leu
GAG
[ENA]
¡û
>W1710924050
LOCQ01000062
Betaproteobacteria
Janthinobacterium psychrotolerans S3-2 [LOCQ]
418972
419056
+
Leu
GAG
[ENA]
¡û
>W1710995930
LQAS01000002
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [LQAS]
223627
223543
-
Leu
GAG
[ENA]
¡û
>W1711033320
LRHV01000002
Betaproteobacteria
Duganella sp. HH105 [LRHV]
22253
22169
-
Leu
GAG
[ENA]
¡û
>W1711033399
LRHW01000052
Betaproteobacteria
Janthinobacterium lividum [LRHW]
178467
178383
-
Leu
GAG
[ENA]
¡û
>W1711033496
LRHX01000020
Betaproteobacteria
Janthinobacterium sp. MP5059B [LRHX]
209330
209414
+
Leu
GAG
[ENA]
¡û
>W1711033540
LRHY01000114
Betaproteobacteria
Janthinobacterium sp. HH100 [LRHY]
73815
73899
+
Leu
GAG
[ENA]
¡û
>W1711033556
LRHZ01000001
Betaproteobacteria
Janthinobacterium sp. HH102 [LRHZ]
377028
377112
+
Leu
GAG
[ENA]
¡û
>W1711033676
LRIA01000116
Betaproteobacteria
Janthinobacterium sp. HH103 [LRIA]
191606
191522
-
Leu
GAG
[ENA]
¡û
>W1711033703
LRIB01000023
Betaproteobacteria
Janthinobacterium sp. HH104 [LRIB]
190124
190040
-
Leu
GAG
[ENA]
¡û
>W1711033748
LRIC01000008
Betaproteobacteria
Janthinobacterium sp. HH106 [LRIC]
188270
188186
-
Leu
GAG
[ENA]
¡û
>W1711033800
LRID01000036
Betaproteobacteria
Janthinobacterium sp. HH107 [LRID]
62741
62825
+
Leu
GAG
[ENA]
¡û
>W1711046625
LROM01000106
Betaproteobacteria
Duganella phyllosphaerae [LROM]
89136
89052
-
Leu
GAG
[ENA]
¡û
>W1711046665
LRON01000004
Betaproteobacteria
Duganella sp. HH101 [LRON]
325739
325823
+
Leu
GAG
[ENA]
¡û
>W1711308614
MAQB02000006
Betaproteobacteria
Janthinobacterium lividum [MAQB]
411451
411367
-
Leu
GAG
[ENA]
¡û
>W1711430713
MIJG01000006
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
569845
569929
+
Leu
GAG
[ENA]
¡û
>W131045997
AMSA01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
82445
82529
+
Leu
GAG
[ENA]
¡û
>W131046039
AMSB01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
91414
91498
+
Leu
GAG
[ENA]
¡û
>W131062289
ANJR01000020
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
58479
58395
-
Leu
GAG
[ENA]
¡û
>W131106674
APFF01000021
Betaproteobacteria
Janthinobacterium sp. CG3 [APFF]
344023
344107
+
Leu
GAG
[ENA]
¡û
>W1711710483
MSZN01000001
Betaproteobacteria
Alcaligenes faecalis [MSZN]
114856
114772
-
Leu
GAG
[ENA]
¡û
>W1711710532
MSZO01000002
Betaproteobacteria
Alcaligenes faecalis [MSZO]
277654
277738
+
Leu
GAG
[ENA]
¡û
>W1711710628
MSZP01000011
Betaproteobacteria
Alcaligenes faecalis [MSZP]
114683
114599
-
Leu
GAG
[ENA]
¡û
>W1711710665
MSZQ01000011
Betaproteobacteria
Alcaligenes faecalis [MSZQ]
25860
25944
+
Leu
GAG
[ENA]
¡û
>W1711710714
MSZR01000013
Betaproteobacteria
Alcaligenes faecalis [MSZR]
25919
26003
+
Leu
GAG
[ENA]
¡û
>W1711711863
MTBI01000001
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [MTBI]
290691
290775
+
Leu
GAG
[ENA]
¡û
>W1711765104
MUXB01000081
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
31287
31371
+
Leu
GAG
[ENA]
¡û
>W1712004475
NEGX01000039
Betaproteobacteria
Janthinobacterium sp. GW460W [NEGX]
4508
4592
+
Leu
GAG
[ENA]
¡û
>W1712004557
NEGY01000050
Betaproteobacteria
Janthinobacterium sp. GW460P [NEGY]
22481
22565
+
Leu
GAG
[ENA]
¡û
>W1712004615
NEGZ01000026
Betaproteobacteria
Janthinobacterium sp. GW458P [NEGZ]
47146
47062
-
Leu
GAG
[ENA]
¡û
>W1712004711
NEHA01000068
Betaproteobacteria
Janthinobacterium sp. GW456W [NEHA]
4503
4587
+
Leu
GAG
[ENA]
¡û
>W1712004743
NEHB01000001
Betaproteobacteria
Janthinobacterium sp. GW456P [NEHB]
519604
519688
+
Leu
GAG
[ENA]
¡û
>W1712110260
NJGU01000004
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
32933
33017
+
Leu
GAG
[ENA]
¡û
>W1712110313
NJGV01000004
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
184506
184590
+
Leu
GAG
[ENA]
¡û
>C171010466
CP011319
Betaproteobacteria
Janthinobacterium sp. 1_2014MBL_MicDiv [CP011319]
1605328
1605412
+
Leu
GAG
-
¡û
>C171021201
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
1977959
1978043
+
Leu
GAG
-
¡û
>C171085350
CP018845
Betaproteobacteria
Herbaspirillum robiniae AA6 [CP018845]
250101
250185
+
Leu
GAG
-
¡û
>C171095008
CP019510
Betaproteobacteria
Janthinobacterium sp. LM6 [CP019510]
4730137
4730053
-
Leu
GAG
-
¡û
>C171115526
CP021079
Betaproteobacteria
Alcaligenes faecalis P156 [CP021079]
2794995
2794911
-
Leu
GAG
-
¡û
>W131050139
AMWD01000002
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
2185491
2185407
-
Leu
GAG
[ENA]
¡û
>W131176201
ARJV01000027
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
820555
820471
-
Leu
GAG
[ENA]
¡û
>W131179068
ARMC01000006
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
144861
144945
+
Leu
GAG
[ENA]
¡û
>W131225146
AUDI01000008
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
180612
180528
-
Leu
GAG
[ENA]
¡û
>W131051758
AMXV01000012
Betaproteobacteria
Alcaligenes sp. HPC1271 [AMXV]
150298
150214
-
Leu
GAG
[ENA]
¡û
>W131223056
AUBT01000004
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus DSM 16503 [AUBT]
367872
367788
-
Leu
GAG
[ENA]
¡û
>WENV180018487
FSZM01000053
[FSZM] metagenome; soil
1915
1831
-
Leu
GAG
[ENA]
¢þ
>WENV180024852
FTIJ01182423
[FTIJ] metagenome; soil
22
106
+
Leu
GAG
[ENA]
¢þ
>WENV180027095
FTIW01000436
[FTIW] metagenome; soil
485
401
-
Leu
GAG
[ENA]
¢þ
>WENV180035701
FTLB01000002
[FTLB] metagenome; soil
213364
213280
-
Leu
GAG
[ENA]
¢þ
>W141003840
AEEC02000031
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
45263
45347
+
Leu
GAG
[ENA]
¡û
>W141104421
AVOG02000012
Betaproteobacteria
Alcaligenes sp. EGD-AK7 [AVOG]
119558
119474
-
Leu
GAG
[ENA]
¡û
>WENV181384825
OFRI01012999
[OFRI] wastewater metagenome; Exp Tend VB 90WW
796
712
-
Leu
GAG
[ENA]
¢þ
>WENV181388414
OFRM01015078
[OFRM] wastewater metagenome; Exp Tend VB 0WW
89
5
-
Leu
GAG
[ENA]
¢þ
>WENV181398774
OFSE01001442
[OFSE] wastewater metagenome; Exp Tend VB 50WW
4351
4435
+
Leu
GAG
[ENA]
¢þ
>W141170732
AXYV01000003
Betaproteobacteria
beta proteobacterium JGI 0001013-N12 [AXYV]
13758
13674
-
Leu
GAG
[ENA]
¡û
>W141223399
BADF01000131
Betaproteobacteria
Herbaspirillum sp. B39 [BADF]
3902
3818
-
Leu
GAG
[ENA]
¡û
>W141223544
BADJ01001153
Betaproteobacteria
Herbaspirillum sp. B501 [BADJ]
1293
1377
+
Leu
GAG
[ENA]
¡û
>W141237708
BBJQ01000002
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BBJQ]
118931
118847
-
Leu
GAG
[ENA]
¡û
>W141258918
CBXX010000035
Betaproteobacteria
Herbaspirillum sp. RV1423 [CBXX]
17825
17741
-
Leu
GAG
[ENA]
¡û
>WENV183696784
OUMA01000006
[OUMA] metagenome; soil
10544
10628
+
Leu
GAG
[ENA]
¢þ
>WENV183741321
PJUF01085105
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
204
288
+
Leu
GAG
[ENA]
¢þ
>WENV170001737
AGFS01136645
[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
207
123
-
Leu
GAG
[ENA]
¢þ
>WENV170165377
CEON01114338
[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
202
286
+
Leu
GAG
[ENA]
¢þ
>WENV170202171
CEPQ01125996
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
800
716
-
Leu
GAG
[ENA]
¢þ
>WENV170559237
CXWL01115570
[CXWL] groundwater metagenome; biofilm material
40037
39953
-
Leu
GAG
[ENA]
¢þ
>WENV170559303
CXWL01118465
[CXWL] groundwater metagenome; biofilm material
2859
2775
-
Leu
GAG
[ENA]
¢þ
>WENV170646013
JQGF01006587
[JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each
5283
5367
+
Leu
GAG
[ENA]
¢þ
>WENV170655593
JTFN01049401
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
88
4
-
Leu
GAG
[ENA]
¢þ
>WENV170655616
JTFN01052797
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
15
99
+
Leu
GAG
[ENA]
¢þ
>WENV170655683
JTFN01057306
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
717
633
-
Leu
GAG
[ENA]
¢þ
>WENV170657128
JTFO01089357
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
717
633
-
Leu
GAG
[ENA]
¢þ
>WENV170966033
MTEV01012280
[MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine
2453
2537
+
Leu
GAG
[ENA]
¢þ
>W141484439
JFYR01000004
Betaproteobacteria
Janthinobacterium lividum [JFYR]
186358
186274
-
Leu
GAG
[ENA]
¡û
>C181053245
CP021641
Betaproteobacteria
Alcaligenes faecalis JQ135 [CP021641]
2910093
2910009
-
Leu
GAG
-
¡û
>C181071860
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
3089063
3088979
-
Leu
GAG
-
¡û
>C181081145
CP023422
Betaproteobacteria
Janthinobacterium svalbardensis PAMC 27463 [CP023422]
4715137
4715053
-
Leu
GAG
-
¡û
>C181088603
CP023667
Betaproteobacteria
Alcaligenes faecalis DSM 30030 [CP023667]
2547456
2547372
-
Leu
GAG
-
¡û
>C181163958
CP028324
Betaproteobacteria
Pseudoduganella armeniaca ZMN-3 [CP028324]
4712143
4712059
-
Leu
GAG
-
¡û
>C181187711
CP030092
Betaproteobacteria
Massilia sp. YMA4 [CP030092]
345812
345896
+
Leu
GAG
-
¡û
>C191029332
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
1930595
1930679
+
Leu
GAG
-
¡û
>C191085282
CP032153
Betaproteobacteria
Alcaligenes aquatilis QD168 [CP032153]
3093675
3093591
-
Leu
GAG
-
¡û
>C191091183
CP032521
Betaproteobacteria
Alcaligenes faecalis J481 [CP032521]
1416156
1416072
-
Leu
GAG
-
¡û
>C191098157
CP033019
Betaproteobacteria
Janthinobacterium agaricidamnosum BHSEK [CP033019]
4041105
4041021
-
Leu
GAG
-
¡û
>C191113959
CP033861
Betaproteobacteria
Alcaligenes faecalis FDAARGOS_491 [CP033861]
3822120
3822036
-
Leu
GAG
-
¡û
>C191124229
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
1856814
1856898
+
Leu
GAG
-
¡û
>C191125982
CP034464
Betaproteobacteria
Undibacterium parvum DSM 23061 [CP034464]
377751
377667
-
Leu
GAG
-
¡û
>C191149669
CP036294
Betaproteobacteria
Alcaligenes faecalis AN70 [CP036294]
706633
706549
-
Leu
GAG
-
¡û
>C191150765
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
1552204
1552288
+
Leu
GAG
-
¡û
>C191156615
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
2004104
2004188
+
Leu
GAG
-
¡û
>C191174010
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
2976780
2976696
-
Leu
GAG
-
¡û
>C191188194
CP041185
Betaproteobacteria
Janthinobacterium tructae SNU WT3 [CP041185]
2406727
2406643
-
Leu
GAG
-
¡û
>W141821564
JQNP01000001
Betaproteobacteria
Janthinobacterium sp. RA13 [JQNP]
2296741
2296657
-
Leu
GAG
[ENA]
¡û
>W1910577870
JUGD01000026
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
83936
84020
+
Leu
GAG
[ENA]
¡û
>W1910578273
JWJC01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
82447
82531
+
Leu
GAG
[ENA]
¡û
>W1910942555
NJGY01000001
Betaproteobacteria
Janthinobacterium sp. PC23-8 [NJGY]
478677
478593
-
Leu
GAG
[ENA]
¡û
>W1911199882
NRDQ01000070
Betaproteobacteria
Janthinobacterium sp. AD80 [NRDQ]
22557
22641
+
Leu
GAG
[ENA]
¡û
>W1810068167
PDZI01000005
Betaproteobacteria
Janthinobacterium sp. BJB303 [PDZI]
180257
180173
-
Leu
GAG
[ENA]
¡û
>W1810068240
PDZJ01000001
Betaproteobacteria
Janthinobacterium sp. BJB301 [PDZJ]
2781599
2781515
-
Leu
GAG
[ENA]
¡û
>W1810068324
PDZK01000001
Betaproteobacteria
Janthinobacterium sp. BJB446 [PDZK]
2796676
2796592
-
Leu
GAG
[ENA]
¡û
>W1810068403
PDZL01000006
Betaproteobacteria
Janthinobacterium sp. BJB426 [PDZL]
122630
122714
+
Leu
GAG
[ENA]
¡û
>W1810068461
PDZM01000001
Betaproteobacteria
Janthinobacterium sp. BJB312 [PDZM]
177085
177169
+
Leu
GAG
[ENA]
¡û
>W1810068584
PDZN01000019
Betaproteobacteria
Janthinobacterium sp. BJB304 [PDZN]
109936
109852
-
Leu
GAG
[ENA]
¡û
>W1810068619
PDZO02000001
Betaproteobacteria
Janthinobacterium sp. BJB1 [PDZO]
678792
678708
-
Leu
GAG
[ENA]
¡û
>W1810068712
PDZP01000007
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
97488
97572
+
Leu
GAG
[ENA]
¡û
>W1810069761
PEBS01000026
Betaproteobacteria
Janthinobacterium sp. ROICE36 [PEBS]
66282
66198
-
Leu
GAG
[ENA]
¡û
>W1810071291
PEEQ01000001
Betaproteobacteria
Janthinobacterium sp. 13 [PEEQ]
4957829
4957913
+
Leu
GAG
[ENA]
¡û
>W1810072784
PEFN01000001
Betaproteobacteria
Janthinobacterium sp. 35 [PEFN]
4509622
4509706
+
Leu
GAG
[ENA]
¡û
>W1810089431
PGES01000001
Betaproteobacteria
Janthinobacterium sp. 67 [PGES]
2171730
2171646
-
Leu
GAG
[ENA]
¡û
>W1810121323
PHUG01000001
Betaproteobacteria
Janthinobacterium sp. 64 [PHUG]
1911431
1911347
-
Leu
GAG
[ENA]
¡û
>W1810172843
PJMQ01000001
Betaproteobacteria
Janthinobacterium sp. 61 [PJMQ]
2642088
2642004
-
Leu
GAG
[ENA]
¡û
>W1810194070
PKOI01000029
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
17073
16989
-
Leu
GAG
[ENA]
¡û
>W1810326777
PUGF01000020
Betaproteobacteria
Solimicrobium silvestre S20-91 [PUGF]
69642
69558
-
Leu
GAG
[ENA]
¡û
>W1810486619
QAXZ01000008
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
187685
187769
+
Leu
GAG
[ENA]
¡û
>W1810487121
QAYI01000007
Betaproteobacteria
Massilia sp. GV016 [QAYI]
182452
182536
+
Leu
GAG
[ENA]
¡û
>W1810576803
QENT01000001
Betaproteobacteria
Janthinobacterium sp. 78 [QENT]
4616498
4616414
-
Leu
GAG
[ENA]
¡û
>W1810583869
QEXO01000001
Betaproteobacteria
Alcaligenes faecalis YBY [QEXO]
276488
276572
+
Leu
GAG
[ENA]
¡û
>W1810659428
QJKB01000001
Betaproteobacteria
Undibacterium pigrum DSM 19792 [QJKB]
1343876
1343792
-
Leu
GAG
[ENA]
¡û
>W1810672495
QJTL01000006
Betaproteobacteria
Duganella sp. GV083 [QJTL]
265445
265361
-
Leu
GAG
[ENA]
¡û
>W1810672608
QJTN01000007
Betaproteobacteria
Massilia sp. GV024 [QJTN]
182647
182731
+
Leu
GAG
[ENA]
¡û
>W1810677203
QKMN01000006
Betaproteobacteria
Duganella sp. GV053 [QKMN]
265445
265361
-
Leu
GAG
[ENA]
¡û
>W1810693439
QLLJ01000006
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
265445
265361
-
Leu
GAG
[ENA]
¡û
>W1810694399
QLLZ01000006
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
299612
299696
+
Leu
GAG
[ENA]
¡û
>W1810788002
QREC01000006
Betaproteobacteria
Duganella sp. GV023 [QREC]
265445
265361
-
Leu
GAG
[ENA]
¡û
>W1810885094
QUNB01000006
Betaproteobacteria
Duganella sp. GV032 [QUNB]
299612
299696
+
Leu
GAG
[ENA]
¡û
>W1810885216
QUND01000006
Betaproteobacteria
Duganella sp. GV046 [QUND]
265445
265361
-
Leu
GAG
[ENA]
¡û
>W1810885850
QUNP01000006
Betaproteobacteria
Duganella sp. GV038 [QUNP]
265445
265361
-
Leu
GAG
[ENA]
¡û
>W1810886099
QUNU01000006
Betaproteobacteria
Duganella sp. GV067 [QUNU]
299691
299775
+
Leu
GAG
[ENA]
¡û
>W1810887514
QUQN01000001
Betaproteobacteria
Herbaspirillum sp. 3R-3a1 [QUQN]
923017
922933
-
Leu
GAG
[ENA]
¡û
>W1810908109
QVIL01000005
Betaproteobacteria
Duganella sp. BJB489 [QVIL]
384493
384409
-
Leu
GAG
[ENA]
¡û
>W1810908174
QVIM01000006
Betaproteobacteria
Duganella sp. BJB488 [QVIM]
197378
197462
+
Leu
GAG
[ENA]
¡û
>W1810908252
QVIN01000006
Betaproteobacteria
Duganella sp. BJB480 [QVIN]
197378
197462
+
Leu
GAG
[ENA]
¡û
>W1810908285
QVIO01000001
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
273176
273260
+
Leu
GAG
[ENA]
¡û
>W1810908353
QVIP01000001
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
273176
273260
+
Leu
GAG
[ENA]
¡û
>C151082380
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
3653305
3653221
-
Leu
GAG
-
¡û
>C151087564
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
1997642
1997726
+
Leu
GAG
[Ensembl]
¡û
>C151092582
CP012201
Betaproteobacteria
Massilia sp. NR 4-1 [CP012201]
133664
133748
+
Leu
GAG
-
¡û
>C151100186
HG322949
Betaproteobacteria
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 [HG322949]
3651681
3651597
-
Leu
GAG
[Ensembl]
¡û
>C10107800
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
1997882
1997966
+
Leu
GAG
[Ensembl]
¡û
>WENV11101809
AGFS01136645
[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
207
123
-
Leu
GAG
[ENA]
¡û
>W1511321040
JQCV01000007
Betaproteobacteria
Alcaligenes faecalis MOR02 [JQCV]
189686
189770
+
Leu
GAG
[ENA]
¡û
>C11118215
CP002663
Betaproteobacteria
Pusillimonas sp. T7-7 [CP002663]
1962428
1962344
-
Leu
GAG
[Ensembl]
¡û
>W1511355678
JRRH01000006
Betaproteobacteria
Janthinobacterium lividum MTR [JRRH]
295506
295422
-
Leu
GAG
[ENA]
¡û
>W1511537453
JZBR01000002
Betaproteobacteria
Alcaligenes faecalis ZD02 [JZBR]
786536
786452
-
Leu
GAG
[ENA]
¡û
>W1511588761
LBCO01000024
Betaproteobacteria
Janthinobacterium sp. KBS0711 [LBCO]
59533
59617
+
Leu
GAG
[ENA]
¡û
>W1511683790
LFLS01000042
Betaproteobacteria
Herbaspirillum autotrophicum IAM 14942 [LFLS]
17364
17280
-
Leu
GAG
[ENA]
¡û
>W1511683836
LFLT01000016
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
77694
77610
-
Leu
GAG
[ENA]
¡û
>W1511683885
LFLU01000006
Betaproteobacteria
Herbaspirillum rhizosphaerae UMS-37 [LFLU]
209218
209134
-
Leu
GAG
[ENA]
¡û
>W1511684870
LFMX01000013
Betaproteobacteria
Candidatus Burkholderia humilis humilis UZHbot5 [LFMX]
65912
65996
+
Leu
GAG
[ENA]
¡û
>C161051382
CP013119
Betaproteobacteria
Alcaligenes faecalis ZD02 [CP013119]
786536
786452
-
Leu
GAG
[Ensembl]
¡û
>C161060437
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
1904607
1904691
+
Leu
GAG
[Ensembl]
¡û
>W121061951
AJHH01000051
Betaproteobacteria
Herbaspirillum lusitanum P6-12 [AJHH]
31109
31193
+
Leu
GAG
[ENA]
¡û
>W121068687
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
493614
493698
+
Leu
GAG
[ENA]
¡û
>W121085185
AKJA01000140
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
6157
6073
-
Leu
GAG
[ENA]
¡û
>W121086387
AKJW01000077
Betaproteobacteria
Herbaspirillum sp. CF444 [AKJW]
32071
32155
+
Leu
GAG
[ENA]
¡û
>W121031840
AHHB01000037
Betaproteobacteria
Janthinobacterium lividum PAMC 25724 [AHHB]
208240
208156
-
Leu
GAG
[ENA]
¡û
>W1610070419
BCTG01000003
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
23994
24078
+
Leu
GAG
[ENA]
¡û
>W1610070471
BCTH01000027
Betaproteobacteria
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 [BCTH]
9788
9872
+
Leu
GAG
[ENA]
¡û
>W1610071842
BCUJ01000009
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
104017
103933
-
Leu
GAG
[ENA]
¡û
>W1610093556
CYTB01000003
Betaproteobacteria
Alcaligenes faecalis ATCC8750 [CYTB]
3264
3348
+
Leu
GAG
[ENA]
¡û
>W121091200
AKMR01000004
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR]
119407
119323
-
Leu
GAG
[ENA]
¡û
>W1610640132
LIZH01000459
Betaproteobacteria
Duganella sp. Ant L27C-9 [LIZH]
29054
28970
-
Leu
GAG
[ENA]
¡û
>W1610723029
LMDB01000036
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
117566
117650
+
Leu
GAG
[ENA]
¡û
>W1610723427
LMDJ01000033
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
80580
80664
+
Leu
GAG
[ENA]
¡û
>W1610724391
LMEC01000020
Betaproteobacteria
Massilia sp. Root418 [LMEC]
1098620
1098536
-
Leu
GAG
[ENA]
¡û
>W1610726905
LMFZ01000001
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
351473
351389
-
Leu
GAG
[ENA]
¡û
>W1610729600
LMIC01000051
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
10140
10224
+
Leu
GAG
[ENA]
¡û
>W1610734139
LMLM01000028
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
199876
199960
+
Leu
GAG
[ENA]
¡û
>W1610737139
LMNW01000035
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
23355
23271
-
Leu
GAG
[ENA]
¡û
>W1610751344
LNCE01000178
Betaproteobacteria
Janthinobacterium sp. Ant5-2-1 [LNCE]
122238
122322
+
Leu
GAG
[ENA]
¡û
>W1610765995
LNOL01000016
Betaproteobacteria
Alcaligenes faecalis [LNOL]
39257
39341
+
Leu
GAG
[ENA]
¡û
>W1610781696
LOCQ01000062
Betaproteobacteria
Janthinobacterium psychrotolerans S3-2 [LOCQ]
418972
419056
+
Leu
GAG
[ENA]
¡û
>W1610850587
LQAS01000002
Betaproteobacteria
Alcaligenes phenolicus subsp. phenolicus [LQAS]
223627
223543
-
Leu
GAG
[ENA]
¡û
>W1610921540
LSUO01000027
Betaproteobacteria
Alcaligenes faecalis P156 [LSUO]
5071
5155
+
Leu
GAG
[ENA]
¡û
>W1611056302
MAQB01000069
Betaproteobacteria
Janthinobacterium lividum [MAQB]
51885
51801
-
Leu
GAG
[ENA]
¡û
>W1710067792
BCTG01000003
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
23994
24078
+
Leu
GAG
[ENA]
¡û
>W1710067844
BCTH01000027
Betaproteobacteria
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 [BCTH]
9788
9872
+
Leu
GAG
[ENA]
¡û
>W1710069044
BCUJ01000009
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
104017
103933
-
Leu
GAG
[ENA]
¡û
>W1710082538
BDHG01000006
Betaproteobacteria
Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG]
3272
3356
+
Leu
GAG
[ENA]
¡û
>W1710509334
FMXD01000001
Betaproteobacteria
Janthinobacterium sp. 551a [FMXD]
486725
486641
-
Leu
GAG
[ENA]
¡û
>W1710515830
FNCD01000001
Betaproteobacteria
Duganella sp. OV458 [FNCD]
384874
384958
+
Leu
GAG
[ENA]
¡û
>W1710517017
FNDA01000001
Betaproteobacteria
Janthinobacterium sp. YR213 [FNDA]
1582706
1582622
-
Leu
GAG
[ENA]
¡û
>W1710519266
FNEQ01000001
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
1137932
1137848
-
Leu
GAG
[ENA]
¡û
>W1710522186
FNHA01000002
Betaproteobacteria
Janthinobacterium sp. OK676 [FNHA]
74445
74361
-
Leu
GAG
[ENA]
¡û
>W1710545142
FOBG01000001
Betaproteobacteria
Duganella sp. CF402 [FOBG]
2311195
2311111
-
Leu
GAG
[ENA]
¡û
>W1710547561
FODC01000001
Betaproteobacteria
Duganella sp. CF517 [FODC]
1052278
1052194
-
Leu
GAG
[ENA]
¡û
>W1710556732
FOKL01000001
Betaproteobacteria
Janthinobacterium sp. 344 [FOKL]
486921
486837
-
Leu
GAG
[ENA]
¡û
>W1710561551
FOOF01000027
Betaproteobacteria
Duganella sp. CF458 [FOOF]
22105
22189
+
Leu
GAG
[ENA]
¡û
>W1710568822
FOTW01000020
Betaproteobacteria
Rugamonas rubra [FOTW]
137754
137838
+
Leu
GAG
[ENA]
¡û
>W1710578397
FPBO01000012
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
111983
111899
-
Leu
GAG
[ENA]
¡û
>W1710581684
FPKH01000001
Betaproteobacteria
Janthinobacterium lividum [FPKH]
352234
352318
+
Leu
GAG
[ENA]
¡û
>W1710592991
FRCX01000001
Betaproteobacteria
Duganella sacchari [FRCX]
192755
192671
-
Leu
GAG
[ENA]
¡û
>W1710596855
FTMV01000003
Betaproteobacteria
Janthinobacterium sp. TND4EL3 [FTMV]
451967
452051
+
Leu
GAG
[ENA]
¡û
>W1710720622
LFKP01000005
Betaproteobacteria
Janthinobacterium lividum [LFKP]
317286
317370
+
Leu
GAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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