This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.119491 (12 seq.)
>WENV180751679
ODHS01106391
[ODHS] human metagenome; G_DNA_Supragingival plaque
376
292
-
Leu
TAG
[ENA]
¢þ
>WENV181077616
OEAP01091597
[OEAP] human metagenome; G_DNA_Supragingival plaque
93
177
+
Leu
TAG
[ENA]
¢þ
>WENV181178990
OEJT01000876
[OEJT] human metagenome; G_DNA_Supragingival plaque
15373
15289
-
Leu
TAG
[ENA]
¢þ
>W141170960
AXZE01000009
Mycoplasmatota
Metamycoplasma salivarium ATCC 23064 [AXZE]
310106
310022
-
Leu
TAG
[ENA]
¡û
>C08006392
CP001047
Mycoplasmatota
Metamycoplasma arthritidis 158L3-1 [CP001047]
245104
245188
+
Leu
TAG
[Ensembl]
¡û
>PL191001702
LR214939
Tenericutes
Mycoplasma salivarium NCTC10113 plasmid:2 (LR214939)
186168
186084
-
Leu
TAG
[ENA]
¡û
>C181188013
CP030103
Mycoplasmatota
Metamycoplasma cloacale NCTC 10199 [CP030103]
353446
353530
+
Leu
TAG
-
¡û
>C181188620
CP030140
Mycoplasmatota
[Mycoplasma] anseris ATCC 49234 [CP030140]
720338
720422
+
Leu
TAG
-
¡û
>C191218778
LR215047
Mycoplasmatota
Metamycoplasma arthritidis NCTC10162 [LR215047]
245016
245100
+
Leu
TAG
-
¡û
>C191218859
LR215049
Mycoplasmatota
Metamycoplasma cloacale NCTC10199 [LR215049]
391674
391590
-
Leu
TAG
-
¡û
>W141731806
JNJL01000016
Mycoplasmatota
Metamycoplasma cloacale ATCC 35276 [JNJL]
34768
34684
-
Leu
TAG
[ENA]
¡û
>W141732284
JNJX01000004
Mycoplasmatota
[Mycoplasma] anseris ATCC 49234 [JNJX]
58024
57940
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK