This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.129290 (23 seq.)
>W1711091091
LTBC01000002
Bacillota
Moorella mulderi DSM 14980 [LTBC]
310801
310724
-
Pro
TGG
[ENA]
¡û
>W1711352248
MDDB01000001
Bacillota
Moorella thermoacetica [MDDB]
208511
208588
+
Pro
TGG
[ENA]
¡û
>W1711352318
MDDC01000005
Bacillota
Moorella thermoacetica [MDDC]
103937
103860
-
Pro
TGG
[ENA]
¡û
>W1711352350
MDDD01000001
Bacillota
Moorella thermoacetica [MDDD]
208093
208170
+
Pro
TGG
[ENA]
¡û
>W1711352428
MDDE01000004
Bacillota
Moorella thermoacetica [MDDE]
57735
57812
+
Pro
TGG
[ENA]
¡û
>W1711428544
MIHH01000004
Bacillota
Moorella thermoacetica [MIHH]
114305
114228
-
Pro
TGG
[ENA]
¡û
>W1711428568
MIIF01000001
Bacillota
Moorella thermoacetica [MIIF]
252924
253001
+
Pro
TGG
[ENA]
¡û
>C171055190
CP017019
Bacillota
Moorella thermoacetica DSM 103132 [CP017019]
1433168
1433245
+
Pro
TGG
-
¡û
>C171058956
CP017237
Bacillota
Moorella thermoacetica DSM 103284 [CP017237]
1193464
1193541
+
Pro
TGG
-
¡û
>C014175
CP000232
Bacillota
Moorella thermoacetica [CP000232]
1250938
1251015
+
Pro
TGG
[Ensembl]
¡û
>WENV181404170
OGBZ01002333
[OGBZ] sediment metagenome; hot spring sediment
962
885
-
Pro
TGG
[ENA]
¢þ
>W141229817
BARR01000042
Bacillota
Moorella thermoacetica Y72 [BARR]
231120
231197
+
Pro
TGG
[ENA]
¡û
>C191073432
CP031054
Bacillota
Moorella thermoacetica 39073-HH [CP031054]
1255178
1255255
+
Pro
TGG
-
¡û
>W09100921
AADT03000005
Bacillota
Moorella thermoacetica ATCC 39073 [AADT]
56439
56362
-
Pro
TGG
[ENA]
¡û
>W1910180067
BJKN01000002
Bacillota
Moorella sp. E308F [BJKN]
591927
592004
+
Pro
TGG
[ENA]
¡û
>W1810010432
BFFN01000004
Bacillota
Moorella sp. Hama-1 [BFFN]
41334
41257
-
Pro
TGG
[ENA]
¡û
>W1810367300
PVXL01000055
Bacillota
Moorella stamsii DSM 26271 [PVXL]
12963
12886
-
Pro
TGG
[ENA]
¡û
>W1810367349
PVXM01000051
Bacillota
Moorella humiferrea DSM 23265 [PVXM]
16647
16570
-
Pro
TGG
[ENA]
¡û
>C151094360
CP012369
Bacillota
Moorella thermoacetica DSM 521 [CP012369]
1145667
1145744
+
Pro
TGG
-
¡û
>C151094411
CP012370
Bacillota
Moorella thermoacetica DSM 2955 [CP012370]
1245200
1245277
+
Pro
TGG
-
¡û
>W1510100254
CELZ01000022
Bacillota
Moorella glycerini NMP [CELZ]
13040
12963
-
Pro
TGG
[ENA]
¡û
>W1510100293
CELZ01000061
Bacillota
Moorella glycerini NMP [CELZ]
8196
8119
-
Pro
TGG
[ENA]
¡û
>W1610925290
LTBC01000002
Bacillota
Moorella mulderi DSM 14980 [LTBC]
310801
310724
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK