tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.129295 (95 seq.)
>W1710872949 LMMK01000007 Alphaproteobacteria Methylobacterium sp. Leaf88 [LMMK] 169111 169188 + Pro GGG [ENA] ¡û
>W1710872996 LMML01000010 Alphaproteobacteria Methylobacterium sp. Leaf89 [LMML] 41134 41211 + Pro GGG [ENA] ¡û
>W1710873691 LMMZ01000023 Alphaproteobacteria Methylobacterium sp. Leaf104 [LMMZ] 502304 502381 + Pro GGG [ENA] ¡û
>W1710873912 LMNE01000002 Alphaproteobacteria Methylobacterium sp. Leaf111 [LMNE] 89358 89281 - Pro GGG [ENA] ¡û
>W1710874152 LMNJ01000012 Alphaproteobacteria Methylobacterium sp. Leaf113 [LMNJ] 329151 329074 - Pro GGG [ENA] ¡û
>W1710874252 LMNL01000012 Alphaproteobacteria Methylobacterium sp. Leaf117 [LMNL] 444813 444890 + Pro GGG [ENA] ¡û
>W1710874643 LMNU01000006 Alphaproteobacteria Methylobacterium sp. Leaf125 [LMNU] 54724 54801 + Pro GGG [ENA] ¡û
>W1710879210 LMRM01000056 Alphaproteobacteria Methylobacterium sp. Leaf94 [LMRM] 124538 124615 + Pro GGG [ENA] ¡û
>W1711073397 LSIM01000240 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 30996 31073 + Pro GGG [ENA] ¡û
>W1711073445 LSIN01000362 Alphaproteobacteria Bradyrhizobium sp. CCH10-C7 [LSIN] 10649 10726 + Pro GGG [ENA] ¡û
>W1711073788 LSIX01000924 Alphaproteobacteria Methylobacterium sp. CCH5-D2 [LSIX] 4776 4699 - Pro GGG [ENA] ¡û
>W1711179448 LWHQ01000058 Alphaproteobacteria Methylobacterium platani [LWHQ] 59325 59402 + Pro GGG [ENA] ¡û
>W1711262676 LYXZ01000056 Alphaproteobacteria Labrys sp. WJW [LYXZ] 135177 135100 - Pro GGG [ENA] ¡û
>W1711501131 MKRG01000030 Alphaproteobacteria Afipia sp. 62-7 [MKRG] 54837 54760 - Pro GGG [ENA] ¡û
>W1711502232 MKSM01000007 Alphaproteobacteria Nitrobacter sp. 62-23 [MKSM] 16519 16442 - Pro GGG [ENA] ¡û
>W1711504263 MKUJ01000017 Alphaproteobacteria Afipia sp. 64-13 [MKUJ] 178975 179052 + Pro GGG [ENA] ¡û
>W1711505925 MKVY01000038 Alphaproteobacteria Rhizobiales bacterium 65-9 [MKVY] 561713 561790 + Pro GGG [ENA] ¡û
>W1711795364 MWPQ01000031 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 31841 31918 + Pro GGG [ENA] ¡û
>W131166479 ARCM01000004 Alphaproteobacteria Ancylobacter sp. FA202 [ARCM] 912176 912253 + Pro GGG [ENA] ¡û
>W131175705 ARJL01000003 Alphaproteobacteria Xanthobacteraceae bacterium 501b [ARJL] 1313837 1313760 - Pro GGG [ENA] ¡û
>C014925 CP000319 Alphaproteobacteria Nitrobacter hamburgensis X14 [CP000319] 1792083 1792160 + Pro GGG [Ensembl] ¡û
>C015358 CP000115 Alphaproteobacteria Nitrobacter winogradskyi Nb-255 [CP000115] 1533855 1533932 + Pro GGG [Ensembl] ¡û
>C018867 CP000463 Alphaproteobacteria Rhodopseudomonas palustris [CP000463] 3181489 3181412 - Pro GGG [Ensembl] ¡û
>w015405 AAPC01000004 Alphaproteobacteria Xanthobacter autotrophicus Py2 [AAPC] 207558 207479 - Pro GGG [ENA] ¡û
>w013001 AAMY01000017 Alphaproteobacteria Nitrobacter sp. Nb-311A [AAMY] 60700 60621 - Pro GGG [ENA] ¡û
>W141007444 AGWX01000003 Alphaproteobacteria Afipia broomeae ATCC 49717 [AGWX] 294158 294081 - Pro GGG [ENA] ¡û
>W141007482 AGWY01000006 Alphaproteobacteria Afipia clevelandensis ATCC 49720 [AGWY] 111252 111329 + Pro GGG [ENA] ¡û
>WENV180396571 OBPV01021440 [OBPV] marine metagenome; ENVO:00002010 554 477 - Pro GGG [ENA] ¢þ
>W141063396 APHQ01000009 Alphaproteobacteria Afipia sp. OHSU_II-uncloned [APHQ] 405221 405298 + Pro GGG [ENA] ¡û
>W141063702 APJE01000006 Alphaproteobacteria Afipia sp. OHSU_I-C6 [APJE] 76117 76040 - Pro GGG [ENA] ¡û
>W141063759 APJF01000008 Alphaproteobacteria Afipia sp. OHSU_I-C4 [APJF] 53693 53770 + Pro GGG [ENA] ¡û
>W141063815 APJG01000020 Alphaproteobacteria Afipia sp. OHSU_I-uncloned [APJG] 53668 53745 + Pro GGG [ENA] ¡û
>W141063861 APJH01000020 Alphaproteobacteria Afipia sp. OHSU_II-C2 [APJH] 76117 76040 - Pro GGG [ENA] ¡û
>W141063884 APJI01000005 Alphaproteobacteria Afipia sp. OHSU_II-C1 [APJI] 136959 137036 + Pro GGG [ENA] ¡û
>WENV180690617 OCZS010014624 [OCZS] soil metagenome; soil 2246 2323 + Pro GGG [ENA] ¢þ
>W141093618 AVBK01000027 Alphaproteobacteria Afipia sp. NBIMC_P1-C1 [AVBK] 26445 26368 - Pro GGG [ENA] ¡û
>W141093670 AVBL01000034 Alphaproteobacteria Afipia sp. NBIMC_P1-C2 [AVBL] 26443 26366 - Pro GGG [ENA] ¡û
>W141093673 AVBM01000001 Alphaproteobacteria Afipia sp. NBIMC_P1-C3 [AVBM] 26443 26366 - Pro GGG [ENA] ¡û
>WENV181307835 OFIS01000003 [OFIS] sludge metagenome; sludge 75263 75340 + Pro GGG [ENA] ¢þ
>WENV181311479 OFJB01002740 [OFJB] sludge metagenome; sludge 6013 6090 + Pro GGG [ENA] ¢þ
>WENV181402160 OFTY01000167 [OFTY] sludge metagenome; sludge 32338 32261 - Pro GGG [ENA] ¢þ
>C08011454 CP000781 Alphaproteobacteria Xanthobacter autotrophicus Py2 [CP000781] 4865618 4865695 + Pro GGG [Ensembl] ¡û
>W141241668 CAHM01000006 Alphaproteobacteria Microvirga massiliensis JC119 [CAHM] 23625 23702 + Pro GGG [ENA] ¡û
>W141243593 CAJQ02000010 Alphaproteobacteria Afipia birgiae 34632 [CAJQ] 156304 156227 - Pro GGG [ENA] ¡û
>WENV170122105 CENN01046985 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 494 417 - Pro GGG [ENA] ¢þ
>WENV170132579 CENT01085865 [CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 145 222 + Pro GGG [ENA] ¢þ
>WENV170707201 LNAP01015056 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 5230 5153 - Pro GGG [ENA] ¢þ
>WENV170974844 MTKY01077174 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2557 2480 - Pro GGG [ENA] ¢þ
>C181020332 CP016616 Alphaproteobacteria Microvirga ossetica V5/3M [CP016616] 328551 328474 - Pro GGG - ¡û
>C181179104 CP029481 Alphaproteobacteria Microvirga sp. 17 mud 1-3 [CP029481] 2049894 2049971 + Pro GGG - ¡û
>C181180016 CP029550 Alphaproteobacteria Methylobacterium durans 17SD2-17 [CP029550] 873246 873169 - Pro GGG - ¡û
>C181180030 CP029551 Alphaproteobacteria Methylobacterium radiodurans 17Sr1-43 [CP029551] 1915498 1915575 + Pro GGG - ¡û
>C181180129 CP029552 Alphaproteobacteria Methylobacterium sp. 17Sr1-1 [CP029552] 5481549 5481472 - Pro GGG - ¡û
>W09103002 AAIS01000002 Alphaproteobacteria Nitrobacter hamburgensis X14 [AAIS] 1048844 1048767 - Pro GGG [ENA] ¡û
>W09103865 AALA01000006 Alphaproteobacteria Rhodopseudomonas palustris BisA53 [AALA] 65822 65745 - Pro GGG [ENA] ¡û
>W141730065 JNIB01000001 Alphaproteobacteria Xanthobacter sp. 91 [JNIB] 4642761 4642838 + Pro GGG [ENA] ¡û
>W141810203 JPUG01000066 Alphaproteobacteria Microvirga sp. BSC39 aerilata [JPUG] 68113 68036 - Pro GGG [ENA] ¡û
>W1910182837 BJNF01000030 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 13237 13160 - Pro GGG [ENA] ¡û
>W1911653556 QDGA01000003 Alphaproteobacteria Microvirga calopogonii CCBAU 65841 [QDGA] 31786 31709 - Pro GGG [ENA] ¡û
>W1911708573 QOWC01000119 Alphaproteobacteria Methylobacterium crusticola MIMD6 [QOWC] 995 1072 + Pro GGG [ENA] ¡û
>W1810057215 PDHT01000027 Alphaproteobacteria Methylobacterium sp. V23 [PDHT] 2392 2315 - Pro GGG [ENA] ¡û
>W1810079896 PELK01001541 Alphaproteobacteria Methylobacterium frigidaeris IER25-16 [PELK] 6577 6654 + Pro GGG [ENA] ¡û
>W1810325515 PUEJ01000010 Alphaproteobacteria Labrys okinawensis RP1T [PUEJ] 258943 259020 + Pro GGG [ENA] ¡û
>W1810487224 QAYK01000015 Alphaproteobacteria Methylobacterium sp. GV104 [QAYK] 41498 41575 + Pro GGG [ENA] ¡û
>W1810672720 QJTP01000015 Alphaproteobacteria Methylobacterium sp. GV094 [QJTP] 41498 41575 + Pro GGG [ENA] ¡û
>W1810706678 QMKH01000004 Alphaproteobacteria Microvirga flavescens c27j1 [QMKH] 241745 241668 - Pro GGG [ENA] ¡û
>W1810735514 QOIO01000043 Alphaproteobacteria Microvirga aerophila DSM 21344 [QOIO] 49486 49563 + Pro GGG [ENA] ¡û
>W1810783325 QQTO01000033 Alphaproteobacteria Bosea caraganae RCAM04680 [QQTO] 205087 205010 - Pro GGG [ENA] ¡û
>W1810783346 QQTP01000006 Alphaproteobacteria Bosea caraganae RCAM04685 [QQTP] 111522 111599 + Pro GGG [ENA] ¡û
>W1510081376 CDSD01000110 Alphaproteobacteria Microvirga massiliensis JC119 [CDSD] 5291 5214 - Pro GGG [ENA] ¡û
>W1511400936 JTHG01000066 Alphaproteobacteria Methylobacterium indicum SE3.6 [JTHG] 688 765 + Pro GGG [ENA] ¡û
>W1511507860 JXOD01000025 Alphaproteobacteria Methylobacterium platani JCM 14648 [JXOD] 1652 1575 - Pro GGG [ENA] ¡û
>W1511563264 LABX01000243 Alphaproteobacteria Methylobacterium aquaticum DSM 16371 [LABX] 17725 17648 - Pro GGG [ENA] ¡û
>W1511563325 LABY01000197 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 3995 3918 - Pro GGG [ENA] ¡û
>W1511591977 LBIA01000001 Alphaproteobacteria Afipia massiliensis LC387 [LBIA] 541872 541949 + Pro GGG [ENA] ¡û
>W11168457 AFOF01000030 Alphaproteobacteria Bradyrhizobiaceae bacterium SG-6C [AFOF] 32991 33068 + Pro GGG [ENA] ¡û
>C161001193 AP014704 Alphaproteobacteria Methylobacterium aquaticum MA-22A [AP014704] 1036100 1036023 - Pro GGG [Ensembl] ¡û
>W121068019 AJUA01000052 Alphaproteobacteria Microvirga lotononidis WSM3557 [AJUA] 127158 127081 - Pro GGG [ENA] ¡û
>W1610735295 LMMK01000007 Alphaproteobacteria Methylobacterium sp. Leaf88 [LMMK] 169111 169188 + Pro GGG [ENA] ¡û
>W1610735342 LMML01000010 Alphaproteobacteria Methylobacterium sp. Leaf89 [LMML] 41134 41211 + Pro GGG [ENA] ¡û
>W1610736037 LMMZ01000023 Alphaproteobacteria Methylobacterium sp. Leaf104 [LMMZ] 502304 502381 + Pro GGG [ENA] ¡û
>W1610736258 LMNE01000002 Alphaproteobacteria Methylobacterium sp. Leaf111 [LMNE] 89358 89281 - Pro GGG [ENA] ¡û
>W1610736498 LMNJ01000012 Alphaproteobacteria Methylobacterium sp. Leaf113 [LMNJ] 329151 329074 - Pro GGG [ENA] ¡û
>W1610736598 LMNL01000012 Alphaproteobacteria Methylobacterium sp. Leaf117 [LMNL] 444813 444890 + Pro GGG [ENA] ¡û
>W1610736989 LMNU01000006 Alphaproteobacteria Methylobacterium sp. Leaf125 [LMNU] 54724 54801 + Pro GGG [ENA] ¡û
>W1610741556 LMRM01000056 Alphaproteobacteria Methylobacterium sp. Leaf94 [LMRM] 124538 124615 + Pro GGG [ENA] ¡û
>W1610912702 LSIM01000240 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 30996 31073 + Pro GGG [ENA] ¡û
>W1610912750 LSIN01000362 Alphaproteobacteria Bradyrhizobium sp. CCH10-C7 [LSIN] 10649 10726 + Pro GGG [ENA] ¡û
>W1610913093 LSIX01000924 Alphaproteobacteria Methylobacterium sp. CCH5-D2 [LSIX] 4776 4699 - Pro GGG [ENA] ¡û
>W1610987349 LWHQ01000058 Alphaproteobacteria Methylobacterium platani [LWHQ] 59325 59402 + Pro GGG [ENA] ¡û
>W1611024543 LYXZ01000056 Alphaproteobacteria Labrys sp. WJW [LYXZ] 135177 135100 - Pro GGG [ENA] ¡û
>W1710505292 FMTP01000001 Alphaproteobacteria Ancylobacter rudongensis [FMTP] 1031046 1030969 - Pro GGG [ENA] ¡û
>W1710507576 FMVJ01000006 Alphaproteobacteria Microvirga guangxiensis [FMVJ] 98501 98424 - Pro GGG [ENA] ¡û
>W1710548838 FOEB01000016 Alphaproteobacteria Methylobacterium sp. ap11 [FOEB] 1871 1948 + Pro GGG [ENA] ¡û
>W1710579033 FPCB01000005 Alphaproteobacteria Methylobacterium sp. 174MFSha1.1 [FPCB] 71346 71269 - Pro GGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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