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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.130564 (6 seq.)
>WENV182032854
OHCW01001249
[OHCW] human gut metagenome; feces
7609
7528
-
Thr
TGT
[ENA]
¢þ
>WENV182036509
OHDC01001197
[OHDC] human gut metagenome; feces
7607
7526
-
Thr
TGT
[ENA]
¢þ
>WENV182144469
OHKW01005986
[OHKW] human gut metagenome; feces
561
642
+
Thr
TGT
[ENA]
¢þ
>WENV182231273
OHRM01001209
[OHRM] human gut metagenome; feces
7626
7545
-
Thr
TGT
[ENA]
¢þ
>WENV182258081
OHTG01002808
[OHTG] human gut metagenome; feces
2040
1959
-
Thr
TGT
[ENA]
¢þ
>WENV182258917
OHTH01001223
[OHTH] human gut metagenome; feces
7552
7471
-
Thr
TGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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