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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.131098 (5 seq.)
>W1711401424
MFNH01000040
Unclassified
Candidatus Levybacteria bacterium RBG_16_35_11 [MFNH]
205732
205816
+
Leu
TAG
[ENA]
¡û
>W1910711651
MFNO01000038
Unclassified
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_38_26 [MFNO]
21074
20992
-
Leu
TAG
[ENA]
¡û
>W1910711934
MFNZ01000033
Unclassified
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_13 [MFNZ]
2764
2846
+
Leu
TAG
[ENA]
¡û
>W1910712123
MFOG01000060
Unclassified
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_37_9 [MFOG]
6598
6680
+
Leu
TAG
[ENA]
¡û
>W1910712441
MFOQ01000037
Unclassified
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_37_26 [MFOQ]
2366
2448
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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