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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.136706 (5 seq.)
>A171002434
CP002838
Thermoproteota
Pyrolobus fumarii 1A [CP002838]
634570
634493
-
Arg
GCG
-
¡û
>A171006429
CP013011
Thermoproteota
Pyrodictium delaneyi Su06 [CP013011]
1043989
1044066
+
Arg
GCG
-
¡û
>At0138
CP000493
Thermoproteota
Hyperthermus butylicus DSM 5456 [CP000493]
1277540
1277463
-
Arg
GCG
[Ensembl]
¡û
>W1910869999
NCQP01000001
Thermoproteota
Pyrodictium delaneyi Hulk [NCQP]
63860
63783
-
Arg
GCG
[ENA]
¡û
>W1610772509
LNTB01000001
Thermoproteota
Pyrodictium occultum PL-19 [LNTB]
1176965
1176888
-
Arg
GCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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