This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.139008 (4 seq.)
>WENV181373725
OFQY01000169
[OFQY] wastewater metagenome; Exp Tend VB 10WW
12103
12178
+
Pro
CGG
[ENA]
¢þ
>WENV181382092
OFRG01000039
[OFRG] wastewater metagenome; WWTP Verbania (Effluent)
12452
12527
+
Pro
CGG
[ENA]
¢þ
>WENV181387621
OFRM01000515
[OFRM] wastewater metagenome; Exp Tend VB 0WW
8954
8879
-
Pro
CGG
[ENA]
¢þ
>WENV181398538
OFSE01000162
[OFSE] wastewater metagenome; Exp Tend VB 50WW
13495
13420
-
Pro
CGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK