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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.14403 (244 seq.)
>W1710821469
LKTL01000006
Gammaproteobacteria
Shewanella sp. P1-14-1 [LKTL]
209137
209225
+
Ser
GCT
[ENA]
¡û
>W1710821522
LKTL01000085
Gammaproteobacteria
Shewanella sp. P1-14-1 [LKTL]
411
499
+
Ser
GCT
[ENA]
¡û
>W1710923915
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
20765
20674
-
Ser
GCT
[ENA]
¡û
>W1710923922
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
19718
19627
-
Ser
GCT
[ENA]
¡û
>W1711027096
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
38246
38155
-
Ser
GCT
[ENA]
¡û
>W1711027100
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
37838
37747
-
Ser
GCT
[ENA]
¡û
>W1711174289
LWED01000006
Gammaproteobacteria
Shewanella baltica [LWED]
258
167
-
Ser
GCT
[ENA]
¡û
>W1711174297
LWED01000014
Gammaproteobacteria
Shewanella baltica [LWED]
117850
117759
-
Ser
GCT
[ENA]
¡û
>W1711273433
LZFV01000002
Gammaproteobacteria
Shewanella sp. UCD-FRSSP16_17 [LZFV]
326706
326615
-
Ser
GCT
[ENA]
¡û
>W1711273437
LZFV01000002
Gammaproteobacteria
Shewanella sp. UCD-FRSSP16_17 [LZFV]
326291
326200
-
Ser
GCT
[ENA]
¡û
>W1711340548
MCBT01000011
Gammaproteobacteria
Shewanella colwelliana [MCBT]
158596
158505
-
Ser
GCT
[ENA]
¡û
>W1711621533
MPDF01000008
Gammaproteobacteria
Gammaproteobacteria bacterium MedPE [MPDF]
6208
6117
-
Ser
GCT
[ENA]
¡û
>W1711621613
MPDG02000002
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
882824
882915
+
Ser
GCT
[ENA]
¡û
>W1711624509
MPHJ01000031
Gammaproteobacteria
Shewanella sp. UCD-KL12 [MPHJ]
5523
5432
-
Ser
GCT
[ENA]
¡û
>W1711624514
MPHJ01000031
Gammaproteobacteria
Shewanella sp. UCD-KL12 [MPHJ]
5001
4910
-
Ser
GCT
[ENA]
¡û
>W1711624518
MPHJ01000031
Gammaproteobacteria
Shewanella sp. UCD-KL12 [MPHJ]
4502
4411
-
Ser
GCT
[ENA]
¡û
>W1711624615
MPHK01000026
Gammaproteobacteria
Shewanella sp. UCD-KL21 [MPHK]
23354
23263
-
Ser
GCT
[ENA]
¡û
>W1711624620
MPHK01000026
Gammaproteobacteria
Shewanella sp. UCD-KL21 [MPHK]
22841
22750
-
Ser
GCT
[ENA]
¡û
>W131179770
ARMR01000024
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
18866
18775
-
Ser
GCT
[ENA]
¡û
>W131179798
ARMR01000044
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
254
163
-
Ser
GCT
[ENA]
¡û
>C171033394
CP014782
Gammaproteobacteria
Shewanella psychrophila WP2 [CP014782]
4649999
4649908
-
Ser
GCT
-
¡û
>C171033399
CP014782
Gammaproteobacteria
Shewanella psychrophila WP2 [CP014782]
4649405
4649314
-
Ser
GCT
-
¡û
>C171108608
CP020472
Gammaproteobacteria
Shewanella japonica KCTC 22435 [CP020472]
3661493
3661402
-
Ser
GCT
-
¡û
>C171108612
CP020472
Gammaproteobacteria
Shewanella japonica KCTC 22435 [CP020472]
3661078
3660987
-
Ser
GCT
-
¡û
>C020927
CP000302
Gammaproteobacteria
Shewanella denitrificans OS217 [CP000302]
1415392
1415483
+
Ser
GCT
[Ensembl]
¡û
>C020931
CP000302
Gammaproteobacteria
Shewanella denitrificans OS217 [CP000302]
1415835
1415926
+
Ser
GCT
[Ensembl]
¡û
>C021954
CP000447
Gammaproteobacteria
Shewanella frigidimarina NCIMB 400 [CP000447]
1257132
1257223
+
Ser
GCT
[Ensembl]
¡û
>C021958
CP000447
Gammaproteobacteria
Shewanella frigidimarina NCIMB 400 [CP000447]
1257540
1257631
+
Ser
GCT
[Ensembl]
¡û
>C022527
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
1445268
1445359
+
Ser
GCT
[Ensembl]
¡û
>C022533
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
1445999
1446090
+
Ser
GCT
[Ensembl]
¡û
>C023291
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
3176882
3176791
-
Ser
GCT
[Ensembl]
¡û
>C023297
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
3176151
3176060
-
Ser
GCT
[Ensembl]
¡û
>w028520
ABDD01000008
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [ABDD]
41090
41181
+
Ser
GCT
[ENA]
¡û
>w028515
ABDD01000008
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [ABDD]
40501
40594
+
Ser
GCT
[ENA]
¡û
>w027974
ABCQ01000039
Gammaproteobacteria
Moritella sp. PE36 [ABCQ]
21076
20983
-
Ser
GCT
[ENA]
¡û
>w027967
ABCQ01000039
Gammaproteobacteria
Moritella sp. PE36 [ABCQ]
22102
22009
-
Ser
GCT
[ENA]
¡û
>w024944
AAZC01000098
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
1156
1249
+
Ser
GCT
[ENA]
¡û
>w024938
AAZC01000098
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
385
478
+
Ser
GCT
[ENA]
¡û
>w022860
AAWY01000011
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
7139
7046
-
Ser
GCT
[ENA]
¡û
>w022854
AAWY01000011
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
7870
7777
-
Ser
GCT
[ENA]
¡û
>w021064
AAVJ01000001
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
299236
299143
-
Ser
GCT
[ENA]
¡û
>w021061
AAVJ01000001
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
299602
299509
-
Ser
GCT
[ENA]
¡û
>w021055
AAVJ01000001
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
300234
300141
-
Ser
GCT
[ENA]
¡û
>w020025
AAUO01000045
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [AAUO]
15684
15775
+
Ser
GCT
[ENA]
¡û
>w020020
AAUO01000045
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [AAUO]
14984
15075
+
Ser
GCT
[ENA]
¡û
>w020015
AAUO01000045
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [AAUO]
14399
14492
+
Ser
GCT
[ENA]
¡û
>w018679
AATK01000097
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
7195
7102
-
Ser
GCT
[ENA]
¡û
>w018673
AATK01000097
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
7968
7875
-
Ser
GCT
[ENA]
¡û
>w007680
AAIU01000022
Gammaproteobacteria
Shewanella denitrificans OS-217 [AAIU]
60865
60772
-
Ser
GCT
[ENA]
¡û
>W08005673
ABIC01000011
Gammaproteobacteria
Shewanella benthica KT99 [ABIC]
35867
35779
-
Ser
GCT
[ENA]
¡û
>W08005679
ABIC01000011
Gammaproteobacteria
Shewanella benthica KT99 [ABIC]
35142
35054
-
Ser
GCT
[ENA]
¡û
>C08008664
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3722587
3722499
-
Ser
GCT
[Ensembl]
¡û
>C08008670
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3721816
3721728
-
Ser
GCT
[Ensembl]
¡û
>W141227909
BALN01000018
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
82461
82552
+
Ser
GCT
[ENA]
¡û
>W141227920
BALN01000028
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
121
212
+
Ser
GCT
[ENA]
¡û
>C08010517
CP000821
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [CP000821]
1569189
1569280
+
Ser
GCT
[Ensembl]
¡û
>C08010522
CP000821
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [CP000821]
1569777
1569868
+
Ser
GCT
[Ensembl]
¡û
>C08010528
CP000821
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [CP000821]
1570667
1570758
+
Ser
GCT
[Ensembl]
¡û
>C08010128
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
1456724
1456815
+
Ser
GCT
[Ensembl]
¡û
>C08010134
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
1457356
1457447
+
Ser
GCT
[Ensembl]
¡û
>C08010137
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
1457722
1457813
+
Ser
GCT
[Ensembl]
¡û
>WENV182545115
OJBM01000139
[OJBM] seawater metagenome; Sea water
22021
21930
-
Ser
GCT
[ENA]
¢þ
>WENV182556840
OJDH01000257
[OJDH] seawater metagenome; Sea water
258
167
-
Ser
GCT
[ENA]
¢þ
>C08009817
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
1503124
1503215
+
Ser
GCT
[Ensembl]
¡û
>C08009823
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
1503759
1503850
+
Ser
GCT
[Ensembl]
¡û
>C08009826
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
1504123
1504214
+
Ser
GCT
[Ensembl]
¡û
>W141276557
JADX01000006
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
98222
98313
+
Ser
GCT
[ENA]
¡û
>W141276558
JADX01000007
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
2
93
+
Ser
GCT
[ENA]
¡û
>W141276822
JAEC01000015
Gammaproteobacteria
Shewanella colwelliana ATCC 39565 [JAEC]
23635
23726
+
Ser
GCT
[ENA]
¡û
>W141276823
JAEC01000016
Gammaproteobacteria
Shewanella colwelliana ATCC 39565 [JAEC]
2
93
+
Ser
GCT
[ENA]
¡û
>W141277076
JAEH01000066
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
4238
4329
+
Ser
GCT
[ENA]
¡û
>W141277080
JAEH01000066
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
4686
4777
+
Ser
GCT
[ENA]
¡û
>W141277723
JAEU01000017
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
94
3
-
Ser
GCT
[ENA]
¡û
>C08010786
CP000961
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [CP000961]
4089404
4089316
-
Ser
GCT
[Ensembl]
¡û
>C08010791
CP000961
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [CP000961]
4088820
4088732
-
Ser
GCT
[Ensembl]
¡û
>C08010796
CP000961
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [CP000961]
4088120
4088032
-
Ser
GCT
[Ensembl]
¡û
>WENV170022199
BCQK01001534
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
352
443
+
Ser
GCT
[ENA]
¢þ
>WENV170022203
BCQK01001534
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
757
848
+
Ser
GCT
[ENA]
¢þ
>WENV170023600
BCQL01000212
[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
9751
9660
-
Ser
GCT
[ENA]
¢þ
>WENV170626493
FUWD013223609
[FUWD] metagenome; unknown
674
583
-
Ser
GCT
[ENA]
¢þ
>WENV170782675
MAAC01011135
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
62708
62617
-
Ser
GCT
[ENA]
¢þ
>C181016852
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
4160558
4160467
-
Ser
GCT
-
¡û
>C181016858
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
4159787
4159696
-
Ser
GCT
-
¡û
>C181061334
CP022272
Gammaproteobacteria
Shewanella marisflavi EP1 [CP022272]
2993753
2993662
-
Ser
GCT
-
¡û
>C181061339
CP022272
Gammaproteobacteria
Shewanella marisflavi EP1 [CP022272]
2993205
2993114
-
Ser
GCT
-
¡û
>C181075013
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3299008
3299099
+
Ser
GCT
-
¡û
>C181075019
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3299780
3299871
+
Ser
GCT
-
¡û
>C181164561
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
489031
488940
-
Ser
GCT
-
¡û
>C181164567
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
488260
488169
-
Ser
GCT
-
¡û
>C181165416
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
3883223
3883314
+
Ser
GCT
-
¡û
>C181165422
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
3883954
3884045
+
Ser
GCT
-
¡û
>C181167930
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
3494076
3493985
-
Ser
GCT
-
¡û
>C181167936
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
3493305
3493214
-
Ser
GCT
-
¡û
>C181204251
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
2495670
2495579
-
Ser
GCT
-
¡û
>C181204257
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
2494801
2494710
-
Ser
GCT
-
¡û
>C181214208
LS483452
Gammaproteobacteria
Shewanella benthica DB21MT-2 [LS483452]
3678656
3678565
-
Ser
GCT
-
¡û
>C181214214
LS483452
Gammaproteobacteria
Shewanella benthica DB21MT-2 [LS483452]
3677771
3677680
-
Ser
GCT
-
¡û
>C191017567
CP020373
Gammaproteobacteria
Shewanella khirikhana TH2012 [CP020373]
685914
686005
+
Ser
GCT
-
¡û
>C191017573
CP020373
Gammaproteobacteria
Shewanella khirikhana TH2012 [CP020373]
686554
686645
+
Ser
GCT
-
¡û
>W09102871
AAIO01000021
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
313
404
+
Ser
GCT
[ENA]
¡û
>W09102877
AAIO01000021
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
1083
1174
+
Ser
GCT
[ENA]
¡û
>W09103127
AAIV01000032
Gammaproteobacteria
Shewanella frigidimarina NCIMB 400 [AAIV]
20232
20141
-
Ser
GCT
[ENA]
¡û
>W09103131
AAIV01000032
Gammaproteobacteria
Shewanella frigidimarina NCIMB 400 [AAIV]
19824
19733
-
Ser
GCT
[ENA]
¡û
>W09104266
AALN01000007
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
22395
22304
-
Ser
GCT
[ENA]
¡û
>W09104272
AALN01000007
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
21664
21573
-
Ser
GCT
[ENA]
¡û
>C191117185
CP034015
Gammaproteobacteria
Shewanella livingstonensis LMG 19866 [CP034015]
1621339
1621430
+
Ser
GCT
-
¡û
>C191117189
CP034015
Gammaproteobacteria
Shewanella livingstonensis LMG 19866 [CP034015]
1621746
1621837
+
Ser
GCT
-
¡û
>C191155961
CP037952
Gammaproteobacteria
Parashewanella spongiae HJ039 [CP037952]
1336836
1336927
+
Ser
GCT
-
¡û
>C191155966
CP037952
Gammaproteobacteria
Parashewanella spongiae HJ039 [CP037952]
1337358
1337449
+
Ser
GCT
-
¡û
>C191173199
CP039928
Gammaproteobacteria
Shewanella sp. MEBiC00475 [CP039928]
3527674
3527765
+
Ser
GCT
-
¡û
>C191173203
CP039928
Gammaproteobacteria
Shewanella sp. MEBiC00475 [CP039928]
3528080
3528171
+
Ser
GCT
-
¡û
>C191185877
CP041036
Gammaproteobacteria
Shewanella polaris SM1901 [CP041036]
3398787
3398696
-
Ser
GCT
-
¡û
>C191185881
CP041036
Gammaproteobacteria
Shewanella polaris SM1901 [CP041036]
3398381
3398290
-
Ser
GCT
-
¡û
>C191187087
CP041151
Gammaproteobacteria
Shewanella sp. SNU WT4 [CP041151]
3337399
3337308
-
Ser
GCT
-
¡û
>C191187095
CP041151
Gammaproteobacteria
Shewanella sp. SNU WT4 [CP041151]
3336562
3336471
-
Ser
GCT
-
¡û
>C191187220
CP041153
Gammaproteobacteria
Shewanella marisflavi ECSMB14101 [CP041153]
2977924
2977833
-
Ser
GCT
-
¡û
>C191187225
CP041153
Gammaproteobacteria
Shewanella marisflavi ECSMB14101 [CP041153]
2977377
2977286
-
Ser
GCT
-
¡û
>C191206473
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
3588934
3588843
-
Ser
GCT
-
¡û
>C191206479
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
3588163
3588072
-
Ser
GCT
-
¡û
>W1910237467
FPLD01000005
Gammaproteobacteria
Moritella viscosa [FPLD]
101274
101365
+
Ser
GCT
[ENA]
¡û
>W1910237474
FPLD01000005
Gammaproteobacteria
Moritella viscosa [FPLD]
102293
102384
+
Ser
GCT
[ENA]
¡û
>W1910237554
FPLE01000004
Gammaproteobacteria
Moritella viscosa [FPLE]
101243
101334
+
Ser
GCT
[ENA]
¡û
>W1910237557
FPLE01000005
Gammaproteobacteria
Moritella viscosa [FPLE]
91
182
+
Ser
GCT
[ENA]
¡û
>W1910237634
FPLF01000007
Gammaproteobacteria
Moritella viscosa [FPLF]
43563
43654
+
Ser
GCT
[ENA]
¡û
>W1910237638
FPLF01000008
Gammaproteobacteria
Moritella viscosa [FPLF]
312
403
+
Ser
GCT
[ENA]
¡û
>W1910237696
FPLG01000005
Gammaproteobacteria
Moritella viscosa [FPLG]
101170
101261
+
Ser
GCT
[ENA]
¡û
>W1910237703
FPLG01000005
Gammaproteobacteria
Moritella viscosa [FPLG]
102189
102280
+
Ser
GCT
[ENA]
¡û
>W1910237869
FPLJ01000005
Gammaproteobacteria
Moritella viscosa [FPLJ]
101391
101482
+
Ser
GCT
[ENA]
¡û
>W1910237873
FPLJ01000006
Gammaproteobacteria
Moritella viscosa [FPLJ]
352
443
+
Ser
GCT
[ENA]
¡û
>W1910282696
FRDQ01000004
Gammaproteobacteria
Moritella viscosa [FRDQ]
101323
101414
+
Ser
GCT
[ENA]
¡û
>W1910282699
FRDQ01000005
Gammaproteobacteria
Moritella viscosa [FRDQ]
92
183
+
Ser
GCT
[ENA]
¡û
>W1910282775
FRDR01000008
Gammaproteobacteria
Moritella viscosa [FRDR]
28310
28401
+
Ser
GCT
[ENA]
¡û
>W1910282781
FRDR01000008
Gammaproteobacteria
Moritella viscosa [FRDR]
29183
29274
+
Ser
GCT
[ENA]
¡û
>W1910282842
FRDS01000007
Gammaproteobacteria
Moritella viscosa [FRDS]
26112
26203
+
Ser
GCT
[ENA]
¡û
>W1910282844
FRDS01000008
Gammaproteobacteria
Moritella viscosa [FRDS]
91
182
+
Ser
GCT
[ENA]
¡û
>W1910282911
FRDT01000003
Gammaproteobacteria
Moritella viscosa [FRDT]
101236
101327
+
Ser
GCT
[ENA]
¡û
>W1910282917
FRDT01000003
Gammaproteobacteria
Moritella viscosa [FRDT]
102154
102245
+
Ser
GCT
[ENA]
¡û
>W1910282997
FRDU01000004
Gammaproteobacteria
Moritella viscosa [FRDU]
101401
101492
+
Ser
GCT
[ENA]
¡û
>W1910283003
FRDU01000004
Gammaproteobacteria
Moritella viscosa [FRDU]
102319
102410
+
Ser
GCT
[ENA]
¡û
>W1910283066
FRDV01000008
Gammaproteobacteria
Moritella viscosa [FRDV]
48383
48474
+
Ser
GCT
[ENA]
¡û
>W1910283068
FRDV01000009
Gammaproteobacteria
Moritella viscosa [FRDV]
93
184
+
Ser
GCT
[ENA]
¡û
>W1910283152
FRDW01000005
Gammaproteobacteria
Moritella viscosa [FRDW]
101660
101751
+
Ser
GCT
[ENA]
¡û
>W1910283156
FRDW01000006
Gammaproteobacteria
Moritella viscosa [FRDW]
353
444
+
Ser
GCT
[ENA]
¡û
>W1910676772
MCTV01000068
Gammaproteobacteria
Shewanella sp. 10N.286.52.C2 [MCTV]
153053
153144
+
Ser
GCT
[ENA]
¡û
>W1910676777
MCTV01000068
Gammaproteobacteria
Shewanella sp. 10N.286.52.C2 [MCTV]
153566
153657
+
Ser
GCT
[ENA]
¡û
>W1910676933
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
39394
39303
-
Ser
GCT
[ENA]
¡û
>W1910676938
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
38881
38790
-
Ser
GCT
[ENA]
¡û
>W1910677447
MCUF01000021
Gammaproteobacteria
Shewanella sp. 10N.286.51.B7 [MCUF]
136467
136558
+
Ser
GCT
[ENA]
¡û
>W1910677507
MCUF01000078
Gammaproteobacteria
Shewanella sp. 10N.286.51.B7 [MCUF]
4505
4414
-
Ser
GCT
[ENA]
¡û
>W1910679495
MCVG01000107
Gammaproteobacteria
Shewanella sp. 10N.286.48.B5 [MCVG]
56766
56857
+
Ser
GCT
[ENA]
¡û
>W1910679500
MCVG01000107
Gammaproteobacteria
Shewanella sp. 10N.286.48.B5 [MCVG]
57279
57370
+
Ser
GCT
[ENA]
¡û
>W1910679668
MCVI01000021
Gammaproteobacteria
Shewanella sp. 10N.286.48.A6 [MCVI]
57474
57383
-
Ser
GCT
[ENA]
¡û
>W1910679673
MCVI01000021
Gammaproteobacteria
Shewanella sp. 10N.286.48.A6 [MCVI]
56961
56870
-
Ser
GCT
[ENA]
¡û
>C09109150
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
1480780
1480871
+
Ser
GCT
[Ensembl]
¡û
>C09109156
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
1481551
1481642
+
Ser
GCT
[Ensembl]
¡û
>C09109792
CP000472
Gammaproteobacteria
Shewanella piezotolerans WP3 [CP000472]
1392699
1392790
+
Ser
GCT
[Ensembl]
¡û
>C09109798
CP000472
Gammaproteobacteria
Shewanella piezotolerans WP3 [CP000472]
1393325
1393416
+
Ser
GCT
[Ensembl]
¡û
>W1911551622
OXJV01000001
Gammaproteobacteria
Shewanella algidipiscicola [OXJV]
1060866
1060775
-
Ser
GCT
[ENA]
¡û
>W1911551627
OXJV01000001
Gammaproteobacteria
Shewanella algidipiscicola [OXJV]
1060316
1060225
-
Ser
GCT
[ENA]
¡û
>W1911581902
PGVH01000027
Gammaproteobacteria
Shewanella sp. OPT22 [PGVH]
10623
10532
-
Ser
GCT
[ENA]
¡û
>W1911581907
PGVH01000027
Gammaproteobacteria
Shewanella sp. OPT22 [PGVH]
10089
9998
-
Ser
GCT
[ENA]
¡û
>W1911710108
QPQU01000005
Gammaproteobacteria
Shewanella japonica KCTC 12235 [QPQU]
263655
263746
+
Ser
GCT
[ENA]
¡û
>W1911710112
QPQU01000005
Gammaproteobacteria
Shewanella japonica KCTC 12235 [QPQU]
264070
264161
+
Ser
GCT
[ENA]
¡û
>W1911809460
QYYH01000034
Gammaproteobacteria
Parashewanella spongiae KCTC 22492 [QYYH]
36198
36289
+
Ser
GCT
[ENA]
¡û
>W1911809465
QYYH01000034
Gammaproteobacteria
Parashewanella spongiae KCTC 22492 [QYYH]
36720
36811
+
Ser
GCT
[ENA]
¡û
>W1810005556
BFBQ01000001
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
288167
288076
-
Ser
GCT
[ENA]
¡û
>W1810005562
BFBQ01000001
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
287547
287456
-
Ser
GCT
[ENA]
¡û
>W1810005565
BFBQ01000001
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
287183
287092
-
Ser
GCT
[ENA]
¡û
>W1810154317
PIZK01000010
Gammaproteobacteria
Alteromonadales bacterium alter-6D02 [PIZK]
137159
137068
-
Ser
GCT
[ENA]
¡û
>W1810154345
PIZK01000021
Gammaproteobacteria
Alteromonadales bacterium alter-6D02 [PIZK]
92371
92280
-
Ser
GCT
[ENA]
¡û
>W1810155301
PJAP01000588
Gammaproteobacteria
Shewanella sp. 11B5 [PJAP]
3901
3992
+
Ser
GCT
[ENA]
¡û
>W1810155927
PJAZ01000054
Gammaproteobacteria
Shewanella sp. Bg11-22 [PJAZ]
90355
90446
+
Ser
GCT
[ENA]
¡û
>W1810155934
PJAZ01000054
Gammaproteobacteria
Shewanella sp. Bg11-22 [PJAZ]
91192
91283
+
Ser
GCT
[ENA]
¡û
>W1810156270
PJBE01000013
Gammaproteobacteria
Shewanella sp. Choline-02u-19 [PJBE]
2381249
2381158
-
Ser
GCT
[ENA]
¡û
>W1810156277
PJBE01000013
Gammaproteobacteria
Shewanella sp. Choline-02u-19 [PJBE]
2380412
2380321
-
Ser
GCT
[ENA]
¡û
>W1810156653
PJBL01000002
Gammaproteobacteria
Shewanella sp. GutCb [PJBL]
106759
106668
-
Ser
GCT
[ENA]
¡û
>W1810156660
PJBL01000002
Gammaproteobacteria
Shewanella sp. GutCb [PJBL]
105921
105830
-
Ser
GCT
[ENA]
¡û
>W1810156802
PJBM01000260
Gammaproteobacteria
Shewanella sp. GutDb-MelDb [PJBM]
22909
22818
-
Ser
GCT
[ENA]
¡û
>W1810156809
PJBM01000260
Gammaproteobacteria
Shewanella sp. GutDb-MelDb [PJBM]
22072
21981
-
Ser
GCT
[ENA]
¡û
>W1810157600
PJCA01000037
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
19927
19836
-
Ser
GCT
[ENA]
¡û
>W1810157607
PJCA01000037
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
18908
18817
-
Ser
GCT
[ENA]
¡û
>W1810157742
PJCD01000002
Gammaproteobacteria
Shewanella sp. ALD9 [PJCD]
172386
172295
-
Ser
GCT
[ENA]
¡û
>W1810157746
PJCD01000002
Gammaproteobacteria
Shewanella sp. ALD9 [PJCD]
171977
171886
-
Ser
GCT
[ENA]
¡û
>W1810157883
PJCE01000001
Gammaproteobacteria
Shewanella sp. Actino-trap-3 [PJCE]
1971139
1971048
-
Ser
GCT
[ENA]
¡û
>W1810157888
PJCE01000001
Gammaproteobacteria
Shewanella sp. Actino-trap-3 [PJCE]
1970628
1970537
-
Ser
GCT
[ENA]
¡û
>W1810423008
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
2318982
2318891
-
Ser
GCT
[ENA]
¡û
>W1810423014
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
2318215
2318124
-
Ser
GCT
[ENA]
¡û
>W1810721538
QNSC01000003
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
197074
197165
+
Ser
GCT
[ENA]
¡û
>W1810721545
QNSC01000003
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
197972
198063
+
Ser
GCT
[ENA]
¡û
>C151103092
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
571721
571812
+
Ser
GCT
[Ensembl]
¡û
>C151103098
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
572594
572685
+
Ser
GCT
[Ensembl]
¡û
>W10119032
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
93691
93600
-
Ser
GCT
[ENA]
¡û
>W10119038
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
92918
92827
-
Ser
GCT
[ENA]
¡û
>W10126057
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
342648
342557
-
Ser
GCT
[ENA]
¡û
>W10126063
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
341886
341795
-
Ser
GCT
[ENA]
¡û
>W10126361
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469090
469181
+
Ser
GCT
[ENA]
¡û
>W10126367
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469852
469943
+
Ser
GCT
[ENA]
¡û
>C10112886
AP011177
Gammaproteobacteria
Shewanella violacea DSS12 [AP011177]
3582195
3582104
-
Ser
GCT
[Ensembl]
¡û
>C10112891
AP011177
Gammaproteobacteria
Shewanella violacea DSS12 [AP011177]
3581492
3581401
-
Ser
GCT
[Ensembl]
¡û
>C10112896
AP011177
Gammaproteobacteria
Shewanella violacea DSS12 [AP011177]
3580582
3580491
-
Ser
GCT
[Ensembl]
¡û
>C10112900
AP011177
Gammaproteobacteria
Shewanella violacea DSS12 [AP011177]
3579784
3579693
-
Ser
GCT
[Ensembl]
¡û
>C11119383
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
1485169
1485260
+
Ser
GCT
[Ensembl]
¡û
>C11119389
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
1485931
1486022
+
Ser
GCT
[Ensembl]
¡û
>W1511366789
JSFF01000005
Gammaproteobacteria
Shewanella sp. ECSMB14101 [JSFF]
127213
127122
-
Ser
GCT
[ENA]
¡û
>W1511366797
JSFF01000005
Gammaproteobacteria
Shewanella sp. ECSMB14101 [JSFF]
126317
126226
-
Ser
GCT
[ENA]
¡û
>C11119525
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3741291
3741200
-
Ser
GCT
[Ensembl]
¡û
>C11119531
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3740521
3740430
-
Ser
GCT
[Ensembl]
¡û
>C11119623
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3791712
3791621
-
Ser
GCT
[Ensembl]
¡û
>C11119629
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3790939
3790848
-
Ser
GCT
[Ensembl]
¡û
>C11121560
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
3251365
3251274
-
Ser
GCT
[Ensembl]
¡û
>C11121566
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
3250634
3250543
-
Ser
GCT
[Ensembl]
¡û
>W11125204
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
93691
93600
-
Ser
GCT
[ENA]
¡û
>W11125210
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
92918
92827
-
Ser
GCT
[ENA]
¡û
>W11133318
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
342648
342557
-
Ser
GCT
[ENA]
¡û
>W11133324
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
341886
341795
-
Ser
GCT
[ENA]
¡û
>W11133622
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469090
469181
+
Ser
GCT
[ENA]
¡û
>W11133628
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469852
469943
+
Ser
GCT
[ENA]
¡û
>W11178444
AGEX01000004
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
529465
529374
-
Ser
GCT
[ENA]
¡û
>W11178477
AGEX01000010
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
575
484
-
Ser
GCT
[ENA]
¡û
>W121102672
AKXQ01000012
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
140870
140961
+
Ser
GCT
[ENA]
¡û
>W121113028
ALOE01000029
Gammaproteobacteria
Moritella marina ATCC 15381 [ALOE]
18815
18724
-
Ser
GCT
[ENA]
¡û
>W1610072064
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
162590
162681
+
Ser
GCT
[ENA]
¡û
>W1610072070
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
163321
163412
+
Ser
GCT
[ENA]
¡û
>W121102679
AKXQ01000012
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
141939
142030
+
Ser
GCT
[ENA]
¡û
>W1610460591
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7836
7745
-
Ser
GCT
[ENA]
¡û
>W1610460596
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7253
7162
-
Ser
GCT
[ENA]
¡û
>W1610460601
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
6556
6465
-
Ser
GCT
[ENA]
¡û
>W1610685431
LKTL01000006
Gammaproteobacteria
Shewanella sp. P1-14-1 [LKTL]
209137
209225
+
Ser
GCT
[ENA]
¡û
>W1610685484
LKTL01000085
Gammaproteobacteria
Shewanella sp. P1-14-1 [LKTL]
411
499
+
Ser
GCT
[ENA]
¡û
>W1610781516
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
20765
20674
-
Ser
GCT
[ENA]
¡û
>W1610781523
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
19718
19627
-
Ser
GCT
[ENA]
¡û
>W1610875208
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
38246
38155
-
Ser
GCT
[ENA]
¡û
>W1610875212
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
37838
37747
-
Ser
GCT
[ENA]
¡û
>W1610982602
LWED01000006
Gammaproteobacteria
Shewanella baltica [LWED]
258
167
-
Ser
GCT
[ENA]
¡û
>W1610982610
LWED01000014
Gammaproteobacteria
Shewanella baltica [LWED]
117850
117759
-
Ser
GCT
[ENA]
¡û
>W1611032782
LZFV01000002
Gammaproteobacteria
Shewanella sp. UCD-FRSSP16_17 [LZFV]
326706
326615
-
Ser
GCT
[ENA]
¡û
>W1611032786
LZFV01000002
Gammaproteobacteria
Shewanella sp. UCD-FRSSP16_17 [LZFV]
326291
326200
-
Ser
GCT
[ENA]
¡û
>W1710069266
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
162590
162681
+
Ser
GCT
[ENA]
¡û
>W1710069272
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
163321
163412
+
Ser
GCT
[ENA]
¡û
>W1710460155
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7836
7745
-
Ser
GCT
[ENA]
¡û
>W1710460160
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7253
7162
-
Ser
GCT
[ENA]
¡û
>W1710460165
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
6556
6465
-
Ser
GCT
[ENA]
¡û
>W1710597911
FTNN01000001
Gammaproteobacteria
Shewanella morhuae [FTNN]
293963
294054
+
Ser
GCT
[ENA]
¡û
>W1710597914
FTNN01000001
Gammaproteobacteria
Shewanella morhuae [FTNN]
294354
294445
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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