Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.145000 (65 seq.) |
|
>C171085432 |
CP018846 |
Gammaproteobacteria |
Pseudomonas putida AA7 [CP018846] |
1349161 |
1349237 |
+ |
Asp |
GTC |
- |
¡û |
|
>W131165656 |
ARBT01000005 |
Gammaproteobacteria |
Moraxella boevrei DSM 14165 [ARBT] |
56586 |
56510 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W131181458 |
AROI01000016 |
Gammaproteobacteria |
Halopseudomonas pelagia CL-AP6 [AROI] |
171415 |
171339 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W131218384 |
ATXQ01000001 |
Gammaproteobacteria |
Denitrificimonas caeni DSM 24390 [ATXQ] |
163666 |
163590 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W131218398 |
ATXQ01000004 |
Gammaproteobacteria |
Denitrificimonas caeni DSM 24390 [ATXQ] |
106209 |
106285 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W141273275 |
CCSF01000001 |
Gammaproteobacteria |
Pseudomonas saudiphocaensis 20_BN [CCSF] |
1336871 |
1336795 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W141273277 |
CCSF01000001 |
Gammaproteobacteria |
Pseudomonas saudiphocaensis 20_BN [CCSF] |
1170707 |
1170631 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>WENV170012731 |
ASRN01006075 |
[ASRN] bioreactor metagenome; day 82 sample from continuous culture bioreactor inoculated with sediment from the German Wadden |
|
8 |
84 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170646508 |
JQGR01017701 |
[JQGR] bioreactor metagenome; continuous culture inoculated with microbial biomass from the upper 2 cm of a marine |
|
124 |
200 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170685192 |
LFRM01077556 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
2 |
78 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170685606 |
LFRM01100372 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
127 |
51 |
- |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170687441 |
LFRM01193015 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
1754 |
1830 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170689084 |
LFRM01276184 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
2 |
78 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170689208 |
LFRM01283025 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
4569 |
4645 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170689321 |
LFRM01288753 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
64882 |
64958 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170690790 |
LFRM01361603 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
1028 |
952 |
- |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170700526 |
LIDZ01014994 |
[LIDZ] food metagenome; wine grapes on drying loft during traditional withering process |
|
4765 |
4841 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170704844 |
LLEN01003241 |
[LLEN] bioreactor metagenome; day86 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the |
|
449 |
525 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170706464 |
LNAP01003257 |
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with |
|
15414 |
15338 |
- |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170708769 |
LNAQ01000868 |
[LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with |
|
663 |
739 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170708770 |
LNAQ01000868 |
[LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with |
|
839 |
915 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>WENV170716657 |
LSQX01006773 |
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition |
|
66682 |
66758 |
+ |
Asp |
GTC |
[ENA] |
¢þ |
|
>W141462332 |
JFHS01000001 |
Gammaproteobacteria |
Halopseudomonas bauzanensis [JFHS] |
219055 |
219131 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1910635773 |
LNJZ01000009 |
Gammaproteobacteria |
Thiopseudomonas denitrificans X2 [LNJZ] |
256620 |
256544 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1910635774 |
LNJZ01000009 |
Gammaproteobacteria |
Thiopseudomonas denitrificans X2 [LNJZ] |
253904 |
253828 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1910802528 |
MTAD01000135 |
Gammaproteobacteria |
Pseudomonas amygdali pv. morsprunorum FTRS_U8017 [MTAD] |
1029 |
953 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1911398008 |
NWMT01000088 |
Gammaproteobacteria |
Halopseudomonas pelagia 58 [NWMT] |
196770 |
196694 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>C151093926 |
CP012358 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila B4199 [CP012358] |
2288572 |
2288648 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151093941 |
CP012358 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila B4199 [CP012358] |
1279053 |
1278977 |
- |
Asp |
GTC |
- |
¡û |
|
>C151093982 |
CP012359 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila C6819 [CP012359] |
2129589 |
2129665 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151093993 |
CP012359 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila C6819 [CP012359] |
1179988 |
1179912 |
- |
Asp |
GTC |
- |
¡û |
|
>C151094018 |
CP012360 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila C6918 [CP012360] |
1081400 |
1081476 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151094059 |
CP012360 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila C6918 [CP012360] |
152687 |
152611 |
- |
Asp |
GTC |
- |
¡û |
|
>C151094085 |
CP012361 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila D2441 [CP012361] |
1804361 |
1804437 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151094098 |
CP012361 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila D2441 [CP012361] |
856317 |
856241 |
- |
Asp |
GTC |
- |
¡û |
|
>C151094131 |
CP012362 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila D3318 [CP012362] |
2134174 |
2134250 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151094144 |
CP012362 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila D3318 [CP012362] |
1224105 |
1224029 |
- |
Asp |
GTC |
- |
¡û |
|
>C151094181 |
CP012363 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila E1086 [CP012363] |
1870698 |
1870774 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151094200 |
CP012363 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila E1086 [CP012363] |
940231 |
940155 |
- |
Asp |
GTC |
- |
¡û |
|
>C151094234 |
CP012364 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila E1148 [CP012364] |
1842389 |
1842465 |
+ |
Asp |
GTC |
- |
¡û |
|
>C151094253 |
CP012364 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila E1148 [CP012364] |
862451 |
862375 |
- |
Asp |
GTC |
- |
¡û |
|
>W1511356366 |
JRUD01000030 |
Gammaproteobacteria |
Pseudomonas flexibilis ATCC 29606 [JRUD] |
69221 |
69297 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1511356367 |
JRUD01000030 |
Gammaproteobacteria |
Pseudomonas flexibilis ATCC 29606 [JRUD] |
69387 |
69463 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1511393276 |
JTAK01000001 |
Gammaproteobacteria |
Pseudomonas flexibilis JCM 14085 [JTAK] |
528708 |
528784 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1511393277 |
JTAK01000001 |
Gammaproteobacteria |
Pseudomonas flexibilis JCM 14085 [JTAK] |
528874 |
528950 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>C161041367 |
CP012365 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila E5571 [CP012365] |
1828345 |
1828421 |
+ |
Asp |
GTC |
[Ensembl] |
¡û |
|
>C161041387 |
CP012365 |
Gammaproteobacteria |
Thiopseudomonas alkaliphila E5571 [CP012365] |
863913 |
863837 |
- |
Asp |
GTC |
[Ensembl] |
¡û |
|
>W1610047005 |
BBCY01000381 |
Gammaproteobacteria |
Pseudomonas flexibilis JCM 14085 [BBCY] |
2252 |
2176 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1610047006 |
BBCY01000381 |
Gammaproteobacteria |
Pseudomonas flexibilis JCM 14085 [BBCY] |
2086 |
2010 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1610605469 |
LFRZ01000100 |
Gammaproteobacteria |
Gammaproteobacteria bacterium DTU037 [LFRZ] |
64882 |
64958 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1610607232 |
LFTS01000067 |
Gammaproteobacteria |
Gammaproteobacteria bacterium DTU040 [LFTS] |
2 |
78 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1610632727 |
LIQB01000002 |
Gammaproteobacteria |
Psychrobacter glacincola [LIQB] |
113580 |
113656 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1610632735 |
LIQB01000003 |
Gammaproteobacteria |
Psychrobacter glacincola [LIQB] |
652504 |
652580 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1611029951 |
LZDQ01000001 |
Gammaproteobacteria |
Moraxella osloensis [LZDQ] |
204025 |
204101 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1611029973 |
LZDQ01000011 |
Gammaproteobacteria |
Moraxella osloensis [LZDQ] |
39343 |
39419 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710043610 |
BBCY01000381 |
Gammaproteobacteria |
Pseudomonas flexibilis JCM 14085 [BBCY] |
2252 |
2176 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710043611 |
BBCY01000381 |
Gammaproteobacteria |
Pseudomonas flexibilis JCM 14085 [BBCY] |
2086 |
2010 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710506541 |
FMUP01000005 |
Gammaproteobacteria |
Pseudomonas flexibilis [FMUP] |
245108 |
245032 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710506542 |
FMUP01000005 |
Gammaproteobacteria |
Pseudomonas flexibilis [FMUP] |
244942 |
244866 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710551968 |
FOGN01000001 |
Gammaproteobacteria |
Halopseudomonas bauzanensis [FOGN] |
754173 |
754249 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710568994 |
FOUA01000001 |
Gammaproteobacteria |
Halopseudomonas bauzanensis [FOUA] |
625231 |
625155 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710595700 |
FTMC01000018 |
Gammaproteobacteria |
Pseudomonas flexibilis [FTMC] |
15829 |
15753 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710595701 |
FTMC01000018 |
Gammaproteobacteria |
Pseudomonas flexibilis [FTMC] |
15663 |
15587 |
- |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710726756 |
LFRZ01000100 |
Gammaproteobacteria |
Gammaproteobacteria bacterium DTU037 [LFRZ] |
64882 |
64958 |
+ |
Asp |
GTC |
[ENA] |
¡û |
|
>W1710728519 |
LFTS01000067 |
Gammaproteobacteria |
Gammaproteobacteria bacterium DTU040 [LFTS] |
2 |
78 |
+ |
Asp |
GTC |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |