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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.145523 (5 seq.)
>W1710778409
LJCX01000001
Actinomycetota
Actinobacteria bacterium OV320 [LJCX]
38009
38085
+
Met
CAT
[ENA]
¡û
>W1711942057
NAVC01000072
Actinomycetota
Streptomyces sp. B9173 [NAVC]
61943
62019
+
Met
CAT
[ENA]
¡û
>PL191000801
CP030074
Actinobacteria
Streptomyces sp. ZFG47 plasmid:unnamed1 (CP030074)
480165
480239
+
Met
CAT
[ENA]
¡û
>W1511697233
LGDU01000403
Actinomycetota
Streptomyces sp. AS58 [LGDU]
189780
189856
+
Met
CAT
[ENA]
¡û
>W1610642628
LJCX01000001
Actinomycetota
Actinobacteria bacterium OV320 [LJCX]
38009
38085
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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