tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.145719 (61 seq.)
>W131157486 AQSI01000003 Unclassified Marinimicrobia bacterium SCGC AAA298-D23 [AQSI] 55892 55968 + Ile GAT [ENA] ¡û
>WENV180054226 MPLV02076309 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 969 893 - Ile GAT [ENA] ¢þ
>WENV180056763 MPLW02056729 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 2431 2357 - Ile GAT [ENA] ¢þ
>WENV180066192 MPLY02115089 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 10955 10881 - Ile GAT [ENA] ¢þ
>WENV180080879 MPMC02062368 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 874 800 - Ile GAT [ENA] ¢þ
>WENV180084407 MPMD02186361 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 1557 1483 - Ile GAT [ENA] ¢þ
>WENV180105339 OAPD01034272 [OAPD] marine metagenome; 2010 71 147 + Ile GAT [ENA] ¢þ
>WENV180115694 OAPT01021782 [OAPT] marine metagenome; seawater 125 199 + Ile GAT [ENA] ¢þ
>WENV180116192 OAPT01176846 [OAPT] marine metagenome; seawater 246 170 - Ile GAT [ENA] ¢þ
>WENV180378062 OBOO01002531 [OBOO] marine metagenome; ENVO 00002150 294 370 + Ile GAT [ENA] ¢þ
>WENV180378224 OBOO01014176 [OBOO] marine metagenome; ENVO 00002150 614 688 + Ile GAT [ENA] ¢þ
>WENV181308568 OFIT01000330 [OFIT] marine metagenome; seawater 350 424 + Ile GAT [ENA] ¢þ
>WENV181318692 OFKA01007897 [OFKA] marine metagenome; seawater 81 7 - Ile GAT [ENA] ¢þ
>WENV170158021 CEOJ01111950 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 731 807 + Ile GAT [ENA] ¢þ
>WENV170163273 CEOM01115819 [CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 162 238 + Ile GAT [ENA] ¢þ
>WENV170180249 CEOW01069494 [CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20 96 + Ile GAT [ENA] ¢þ
>WENV170207718 CEPU01117049 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20 96 + Ile GAT [ENA] ¢þ
>WENV170222670 CEQD01051523 [CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2293 2217 - Ile GAT [ENA] ¢þ
>WENV170254934 CEQW01037115 [CEQW] marine metagenome genome assembly TARA_070_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 586 662 + Ile GAT [ENA] ¢þ
>WENV170261619 CERB01093881 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 158 234 + Ile GAT [ENA] ¢þ
>WENV170263166 CERC01023401 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 123 199 + Ile GAT [ENA] ¢þ
>WENV170267465 CERG01004594 [CERG] marine metagenome genome assembly TARA_068_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 696 772 + Ile GAT [ENA] ¢þ
>WENV170291179 CESA01095943 [CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 565 641 + Ile GAT [ENA] ¢þ
>WENV170298377 CESF01104971 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 147 71 - Ile GAT [ENA] ¢þ
>WENV170331428 CESW01058299 [CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 79 3 - Ile GAT [ENA] ¢þ
>WENV170335010 CESZ01024940 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 74 150 + Ile GAT [ENA] ¢þ
>WENV170369422 CETR01005784 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 174 98 - Ile GAT [ENA] ¢þ
>WENV170425569 CEUQ01005808 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 118 194 + Ile GAT [ENA] ¢þ
>WENV170431959 CEUS01061061 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 293 217 - Ile GAT [ENA] ¢þ
>WENV170515233 CEWB01010964 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4917 4993 + Ile GAT [ENA] ¢þ
>WENV170537497 CEWR01010160 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 717 793 + Ile GAT [ENA] ¢þ
>WENV170538432 CEWR01080656 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 158 234 + Ile GAT [ENA] ¢þ
>WENV170565362 FAXC01000432 [FAXC] hydrothermal vent metagenome; ocean water 4111 4037 - Ile GAT [ENA] ¢þ
>WENV170581152 FUFK010058774 [FUFK] metagenome; unknown 6067 5991 - Ile GAT [ENA] ¢þ
>WENV170581662 FUFK010065909 [FUFK] metagenome; unknown 49927 50003 + Ile GAT [ENA] ¢þ
>WENV170585630 FUFK010309518 [FUFK] metagenome; unknown 740 816 + Ile GAT [ENA] ¢þ
>WENV170589375 FUFK010637269 [FUFK] metagenome; unknown 744 820 + Ile GAT [ENA] ¢þ
>WENV170729081 LULF01007415 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 192 266 + Ile GAT [ENA] ¢þ
>WENV170734460 LULK01006446 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 2476 2552 + Ile GAT [ENA] ¢þ
>WENV170735451 LULL01002063 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 2438 2364 - Ile GAT [ENA] ¢þ
>WENV170738617 LULP01001255 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 5896 5972 + Ile GAT [ENA] ¢þ
>WENV170740390 LULR01007765 [LULR] marine metagenome; Red Sea water column Station 108 - depth 500m 596 670 + Ile GAT [ENA] ¢þ
>WENV170744759 LULX01009744 [LULX] marine metagenome; Red Sea water column Station 91 - depth 500m 10 84 + Ile GAT [ENA] ¢þ
>WENV170745506 LULY01010525 [LULY] marine metagenome; Red Sea water column Station 91 - depth 200m 224 300 + Ile GAT [ENA] ¢þ
>WENV170745581 LULY01015688 [LULY] marine metagenome; Red Sea water column Station 91 - depth 200m 59 133 + Ile GAT [ENA] ¢þ
>WENV170746855 LUMB01001059 [LUMB] marine metagenome; Red Sea water column Station 91 - depth 25m 2355 2279 - Ile GAT [ENA] ¢þ
>WENV170749104 LUME01010815 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 256 332 + Ile GAT [ENA] ¢þ
>WENV170749411 LUME01038415 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 10 84 + Ile GAT [ENA] ¢þ
>WENV170749700 LUMF01005189 [LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m 881 805 - Ile GAT [ENA] ¢þ
>WENV170751581 LUMI01002955 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 5068 4992 - Ile GAT [ENA] ¢þ
>WENV170752645 LUMJ01002134 [LUMJ] marine metagenome; Red Sea water column Station 22 - depth 500m 3332 3258 - Ile GAT [ENA] ¢þ
>WENV170753914 LUMK01016317 [LUMK] marine metagenome; Red Sea water column Station 22 - depth 200m 1341 1415 + Ile GAT [ENA] ¢þ
>WENV170755441 LUMN01002021 [LUMN] marine metagenome; Red Sea water column Station 22 - depth 25m 204 280 + Ile GAT [ENA] ¢þ
>WENV170757132 LUMQ01000019 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 36559 36635 + Ile GAT [ENA] ¢þ
>WENV170762388 LUMW01006997 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 1556 1482 - Ile GAT [ENA] ¢þ
>WENV170767182 LWDU01044685 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 37270 37346 + Ile GAT [ENA] ¢þ
>SRA1006438 SRR020488.87028 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 26 102 + Ile GAT [SRA]
>SRA1007544 SRR020489.79154 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 83 158 + Ile GAT [SRA]
>SRA1008793 SRR020491.26747 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 22 96 + Ile GAT [SRA]
>SRA1011686 SRR020493.44135 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 148 72 - Ile GAT [SRA]
>SRA1012340 SRR020493.276490 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 148 72 - Ile GAT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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