tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.145733 (78 seq.)
>WENV180049140 MPLU02037051 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 153 79 - Val GAC [ENA] ¢þ
>WENV180052685 MPLU02317209 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 11372 11298 - Val GAC [ENA] ¢þ
>WENV180055259 MPLV02146526 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 414 340 - Val GAC [ENA] ¢þ
>WENV180115828 OAPT01043394 [OAPT] marine metagenome; seawater 78 2 - Val GAC [ENA] ¢þ
>WENV183802508 PVBE010764715 [PVBE] marine metagenome; water 11091 11165 + Val GAC [ENA] ¢þ
>WENV170122542 CENN01101312 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 204 128 - Val GAC [ENA] ¢þ
>WENV170139501 CENX01015371 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 175 + Val GAC [ENA] ¢þ
>WENV170148470 CENZ01374464 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 161 85 - Val GAC [ENA] ¢þ
>WENV170152538 CEOF01011035 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 861 785 - Val GAC [ENA] ¢þ
>WENV170157524 CEOJ01066849 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 323 399 + Val GAC [ENA] ¢þ
>WENV170170269 CEOP01434634 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 117 41 - Val GAC [ENA] ¢þ
>WENV170172039 CEOQ01089376 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4130 4204 + Val GAC [ENA] ¢þ
>WENV170181374 CEOX01000449 [CEOX] marine metagenome genome assembly TARA_065_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 246 - Val GAC [ENA] ¢þ
>WENV170185303 CEOZ01208776 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 848 924 + Val GAC [ENA] ¢þ
>WENV170190604 CEPC01129362 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1252 1176 - Val GAC [ENA] ¢þ
>WENV170197322 CEPK01123543 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 80 4 - Val GAC [ENA] ¢þ
>WENV170205304 CEPT01077166 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1938 2014 + Val GAC [ENA] ¢þ
>WENV170211306 CEPW01056605 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2161 2235 + Val GAC [ENA] ¢þ
>WENV170242002 CEQO01024083 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1134 1058 - Val GAC [ENA] ¢þ
>WENV170244560 CEQP01029789 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 380 304 - Val GAC [ENA] ¢þ
>WENV170248687 CEQQ01162806 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 542 466 - Val GAC [ENA] ¢þ
>WENV170253123 CEQU01055770 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1314 1238 - Val GAC [ENA] ¢þ
>WENV170257296 CEQX01238377 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 60 136 + Val GAC [ENA] ¢þ
>WENV170259239 CEQY01158650 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3982 3906 - Val GAC [ENA] ¢þ
>WENV170261350 CERB01063708 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1493 1569 + Val GAC [ENA] ¢þ
>WENV170263820 CERC01092881 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 167 91 - Val GAC [ENA] ¢þ
>WENV170283847 CERV01003509 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1044 1120 + Val GAC [ENA] ¢þ
>WENV170300717 CESG01151891 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 523 + Val GAC [ENA] ¢þ
>WENV170312757 CESM01415180 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 659 583 - Val GAC [ENA] ¢þ
>WENV170322372 CESR01135794 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 331 255 - Val GAC [ENA] ¢þ
>WENV170334199 CESY01144716 [CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1024 1098 + Val GAC [ENA] ¢þ
>WENV170349065 CETH01006733 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 69014 68938 - Val GAC [ENA] ¢þ
>WENV170349178 CETH01011087 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1794 1718 - Val GAC [ENA] ¢þ
>WENV170354885 CETI01183162 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1133 1207 + Val GAC [ENA] ¢þ
>WENV170361495 CETM01011572 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7168 7244 + Val GAC [ENA] ¢þ
>WENV170369454 CETR01007782 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 78 2 - Val GAC [ENA] ¢þ
>WENV170371377 CETS01007093 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 98 174 + Val GAC [ENA] ¢þ
>WENV170374805 CETT01130510 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 109 33 - Val GAC [ENA] ¢þ
>WENV170376045 CETU01034994 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3505 3581 + Val GAC [ENA] ¢þ
>WENV170378987 CETV01074187 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2886 2961 + Val GAC [ENA] ¢þ
>WENV170387814 CETZ01014905 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8432 8506 + Val GAC [ENA] ¢þ
>WENV170389384 CEUA01009981 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 170 96 - Val GAC [ENA] ¢þ
>WENV170410249 CEUJ01084707 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 93 169 + Val GAC [ENA] ¢þ
>WENV170445238 CEUY01028649 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5664 5740 + Val GAC [ENA] ¢þ
>WENV170450504 CEUZ01120363 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 126 202 + Val GAC [ENA] ¢þ
>WENV170461215 CEVC01323234 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 457 533 + Val GAC [ENA] ¢þ
>WENV170461639 CEVD01013282 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8393 8317 - Val GAC [ENA] ¢þ
>WENV170476467 CEVI01114377 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 654 730 + Val GAC [ENA] ¢þ
>WENV170477004 CEVJ01018412 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 636 712 + Val GAC [ENA] ¢þ
>WENV170479013 CEVK01145919 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 64 140 + Val GAC [ENA] ¢þ
>WENV170483004 CEVM01078166 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 413 337 - Val GAC [ENA] ¢þ
>WENV170488136 CEVO01122787 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 384 460 + Val GAC [ENA] ¢þ
>WENV170490504 CEVQ01002520 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 360 284 - Val GAC [ENA] ¢þ
>WENV170490542 CEVQ01004430 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 98 174 + Val GAC [ENA] ¢þ
>WENV170493421 CEVR01001128 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 96 172 + Val GAC [ENA] ¢þ
>WENV170503824 CEVV01133837 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4225 4301 + Val GAC [ENA] ¢þ
>WENV170507301 CEVX01034568 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4415 4491 + Val GAC [ENA] ¢þ
>WENV170526919 CEWI01087606 [CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1100 1176 + Val GAC [ENA] ¢þ
>WENV170605317 FUWD010471395 [FUWD] metagenome; unknown 233 157 - Val GAC [ENA] ¢þ
>WENV170766119 LWDU01040767 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1705 1629 - Val GAC [ENA] ¢þ
>WENV170772006 LXNI01008537 [LXNI] sponge metagenome; marine sponge reef 3184 3260 + Val GAC [ENA] ¢þ
>WENV170773252 LXNJ01003249 [LXNJ] sponge metagenome; marine sponge reef 8490 8416 - Val GAC [ENA] ¢þ
>WENV170774501 LXNJ01043408 [LXNJ] sponge metagenome; marine sponge reef 1214 1140 - Val GAC [ENA] ¢þ
>WENV170804698 MDSW01051773 [MDSW] marine metagenome; seawater 3853 3927 + Val GAC [ENA] ¢þ
>WENV170807261 MDSW01095648 [MDSW] marine metagenome; seawater 2845 2919 + Val GAC [ENA] ¢þ
>WENV170816766 MDSX01037005 [MDSX] marine metagenome; seawater 3036 2960 - Val GAC [ENA] ¢þ
>WENV170819878 MDSX01101078 [MDSX] marine metagenome; seawater 740 664 - Val GAC [ENA] ¢þ
>WENV170826151 MDSY01106287 [MDSY] marine metagenome; seawater 2908 2832 - Val GAC [ENA] ¢þ
>WENV170835556 MDSZ01116218 [MDSZ] marine metagenome; seawater 3860 3934 + Val GAC [ENA] ¢þ
>WENV170853214 MDTA01164841 [MDTA] marine metagenome; seawater 3703 3627 - Val GAC [ENA] ¢þ
>WENV170866288 MDTB01130841 [MDTB] marine metagenome; seawater 789 713 - Val GAC [ENA] ¢þ
>WENV170903239 MDTD01198606 [MDTD] marine metagenome; seawater 4255 4331 + Val GAC [ENA] ¢þ
>WENV170905515 MDTE01026330 [MDTE] marine metagenome; seawater 7 81 + Val GAC [ENA] ¢þ
>WENV170953076 MEHZ011627726 [MEHZ] marine metagenome; marine surface water 2250 2176 - Val GAC [ENA] ¢þ
>WENV170957668 MKWU01000108 [MKWU] sponge metagenome; 47678 47604 - Val GAC [ENA] ¢þ
>WENV170959464 MKWU01005361 [MKWU] sponge metagenome; 201 277 + Val GAC [ENA] ¢þ
>SRA1008852 SRR020491.42956 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 108 34 - Val GAC [SRA]
>WENV043326 AACY022312226 Marine microbial communities from Global Ocean Sampling (GOS) 458 534 + Val GAC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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