tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.146683 (110 seq.)
>W1711055222 LRUK01000049 Alphaproteobacteria Sphingobium sp. AM [LRUK] 23217 23141 - His GTG [ENA] ¡û
>W1711082163 LSTR01000017 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 95715 95639 - His GTG [ENA] ¡û
>W1711083845 LSVG01000008 Alphaproteobacteria Sphingobium yanoikuyae [LSVG] 31566 31490 - His GTG [ENA] ¡û
>W1711089903 LTAB01000036 Alphaproteobacteria Sphingobium sp. 22B [LTAB] 23217 23141 - His GTG [ENA] ¡û
>W1711146777 LVJD01000263 Alphaproteobacteria Sphingobium yanoikuyae [LVJD] 12549 12625 + His GTG [ENA] ¡û
>W1711175369 LWES01000609 Alphaproteobacteria Erythrobacter sp. HI0028 [LWES] 11648 11572 - His GTG [ENA] ¡û
>W1711227761 LXVX01000002 Alphaproteobacteria Sphingobium sp. TCM1 [LXVX] 215051 214975 - His GTG [ENA] ¡û
>W1711229469 LXYL01000015 Alphaproteobacteria Erythrobacter sp. EhN03 [LXYL] 264675 264751 + His GTG [ENA] ¡û
>W1711250046 LYMJ01000038 Alphaproteobacteria Sphingobium sp. 20006FA paucimobilis [LYMJ] 23198 23122 - His GTG [ENA] ¡û
>W1711434828 MINO01000031 Alphaproteobacteria Sphingobium phenoxybenzoativorans [MINO] 36405 36329 - His GTG [ENA] ¡û
>W1712076989 NGUN01000003 Alphaproteobacteria Sphingobium sp. GW456-12-10-14-TSB1 [NGUN] 1499753 1499677 - His GTG [ENA] ¡û
>W1712084213 NHRH01000049 Alphaproteobacteria Sphingomonas sp. CDS-1 [NHRH] 19688 19764 + His GTG [ENA] ¡û
>C171019687 CP013070 Alphaproteobacteria Sphingobium indicum B90A [CP013070] 948337 948413 + His GTG - ¡û
>C171108884 CP020538 Alphaproteobacteria Sphingobium herbicidovorans MH [CP020538] 435865 435789 - His GTG - ¡û
>W131002977 AGZU01000005 Alphaproteobacteria Sphingobium yanoikuyae ATCC 51230 [AGZU] 366140 366064 - His GTG [ENA] ¡û
>W131052379 AMYX01000029 Alphaproteobacteria alpha proteobacterium LLX12A [AMYX] 45868 45792 - His GTG [ENA] ¡û
>W131196349 ASTG01000009 Alphaproteobacteria Sphingobium bisphenolivorans YL23 [ASTG] 17746 17670 - His GTG [ENA] ¡û
>W131224734 AUDA01000159 Alphaproteobacteria Sphingobium indicum IP26 [AUDA] 23986 23910 - His GTG [ENA] ¡û
>W131241139 BARE01000033 Alphaproteobacteria Sphingobium xenophagum NBRC 107872 [BARE] 62801 62725 - His GTG [ENA] ¡û
>w016536 AAQG01000012 Alphaproteobacteria Sphingomonas sp. SKA58 [AAQG] 76265 76343 + His GTG [ENA] ¡û
>WENV180040909 LLBZ010023020 [LLBZ] soil metagenome; soil from tomato rhizosphere 727 803 + His GTG [ENA] ¢þ
>W141076259 ATDO01000049 Alphaproteobacteria Sphingobium sp. HDIP04 [ATDO] 23943 23867 - His GTG [ENA] ¡û
>W141076316 ATDP01000072 Alphaproteobacteria Sphingobium lactosutens DS20 [ATDP] 14027 13951 - His GTG [ENA] ¡û
>WENV181167894 OEIU01099392 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 230 154 - His GTG [ENA] ¢þ
>WENV181173360 OEIV011417392 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 153 77 - His GTG [ENA] ¢þ
>WENV181412340 OGCI01125512 [OGCI] hot springs metagenome; Hot spring water 444 368 - His GTG [ENA] ¢þ
>W141191347 AYOY01000144 Alphaproteobacteria Sphingobium sp. C100 [AYOY] 44200 44124 - His GTG [ENA] ¡û
>W141231032 BATN01000057 Alphaproteobacteria Sphingobium fuliginis KK22 [BATN] 12650 12574 - His GTG [ENA] ¡û
>W141285083 JANF02000049 Alphaproteobacteria Sphingobium indicum F2 [JANF] 24043 23967 - His GTG [ENA] ¡û
>W141285105 JANF02000091 Alphaproteobacteria Sphingobium indicum F2 [JANF] 85498 85574 + His GTG [ENA] ¡û
>WENV183724302 PJQE01005749 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 576 652 + His GTG [ENA] ¢þ
>WENV183729806 PJTR01000089 [PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment 60599 60523 - His GTG [ENA] ¢þ
>WENV183730510 PJTS01000080 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 31585 31509 - His GTG [ENA] ¢þ
>WENV183732596 PJTX01003023 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 2824 2748 - His GTG [ENA] ¢þ
>WENV183732964 PJTY01000009 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 299168 299244 + His GTG [ENA] ¢þ
>WENV183736883 PJUD01000078 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 128627 128703 + His GTG [ENA] ¢þ
>WENV183739442 PJUE01017762 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 589 665 + His GTG [ENA] ¢þ
>WENV170175981 CEOS01025484 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 612 536 - His GTG [ENA] ¢þ
>W141400564 JDRU02000905 Alphaproteobacteria Sphingomonas sp. BHC-A [JDRU] 4540 4464 - His GTG [ENA] ¡û
>WENV170227699 CEQF01122482 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 696 772 + His GTG [ENA] ¢þ
>WENV170228598 CEQG01023551 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 568 492 - His GTG [ENA] ¢þ
>WENV170236250 CEQL01183261 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3 79 + His GTG [ENA] ¢þ
>WENV170278187 CERQ01062769 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 759 683 - His GTG [ENA] ¢þ
>WENV170556051 CXWL01004260 [CXWL] groundwater metagenome; biofilm material 28722 28798 + His GTG [ENA] ¢þ
>WENV170556087 CXWL01004693 [CXWL] groundwater metagenome; biofilm material 8209 8133 - His GTG [ENA] ¢þ
>W141462283 JFHR01000006 Alphaproteobacteria Sphingobium chlorophenolicum [JFHR] 145292 145216 - His GTG [ENA] ¡û
>WENV170837843 MDSZ01156467 [MDSZ] marine metagenome; seawater 8102 8178 + His GTG [ENA] ¢þ
>W141484981 JFZA02000005 Alphaproteobacteria Sphingobium herbicidovorans NBRC 16415 [JFZA] 4187 4111 - His GTG [ENA] ¡û
>C181003229 AP017655 Alphaproteobacteria Sphingobium cloacae JCM 10874 [AP017655] 698793 698869 + His GTG - ¡û
>C181047599 CP020925 Alphaproteobacteria Sphingobium yanoikuyae SHJ [CP020925] 4129680 4129604 - His GTG - ¡û
>C181072107 CP022745 Alphaproteobacteria Sphingobium xenophagum C1 [CP022745, CP022746] 2977629 2977553 - His GTG - ¡û
>C181089703 CP023741 Alphaproteobacteria Sphingobium yanoikuyae S72 [CP023741] 2993041 2992965 - His GTG - ¡û
>W141520466 JGVR01000027 Alphaproteobacteria Sphingobium yanoikuyae [JGVR] 62730 62654 - His GTG [ENA] ¡û
>C191063616 CP029335 Alphaproteobacteria Sphingobium sp. LF-16 [CP029335] 888623 888699 + His GTG - ¡û
>C191103858 CP033230 Alphaproteobacteria Sphingobium yanoikuyae SJTF8 [CP033230] 478005 478081 + His GTG - ¡û
>C191155742 CP037948 Alphaproteobacteria Qipengyuania sediminis CGMCC 1.12928 [CP037948] 380304 380380 + His GTG - ¡û
>C191163679 CP039248 Alphaproteobacteria Sphingobium sp. PAMC28499 [CP039248] 2393559 2393635 + His GTG - ¡û
>C191185527 CP041016 Alphaproteobacteria Sphingobium fuliginis ATCC 27551 [CP041016, CP041017] 1198405 1198481 + His GTG - ¡û
>W141807742 JPOU01000012 Alphaproteobacteria Sphingobium yanoikuyae [JPOU] 36851 36775 - His GTG [ENA] ¡û
>W1910006997 BBQY01000004 Alphaproteobacteria Sphingobium xenophagum OW59 [BBQY] 625723 625799 + His GTG [ENA] ¡û
>W1910649309 LXYF01000060 Alphaproteobacteria Sphingobium sp. SA916 [LXYF] 17687 17611 - His GTG [ENA] ¡û
>W1910889712 NETV01000001 Alphaproteobacteria Sphingobium sp. LB126 [NETV] 3096250 3096326 + His GTG [ENA] ¡û
>W1911114827 NOIW01000063 Alphaproteobacteria Sphingobium sp. IP1 [NOIW] 573 649 + His GTG [ENA] ¡û
>W1911495416 OBMU01000001 Alphaproteobacteria Novosphingobium sp. Chol11 [OBMU] 1353082 1353006 - His GTG [ENA] ¡û
>W1911688309 QLJK01000019 Alphaproteobacteria Sphingomonas sp. S-NIH.Pt3_0716 [QLJK] 19934 19858 - His GTG [ENA] ¡û
>W1911722455 QRAL01000042 Alphaproteobacteria Sphingobium yanoikuyae SK-NIH.Env6_1116 [QRAL] 22931 23007 + His GTG [ENA] ¡û
>W1911752775 QWLV01000006 Alphaproteobacteria Sphingomonas gilva ZDH117 [QWLV] 187747 187823 + His GTG [ENA] ¡û
>W1911767904 QXFK01000014 Alphaproteobacteria Pelagerythrobacter aerophilus Ery1 [QXFK] 645158 645082 - His GTG [ENA] ¡û
>W1810000467 BEWI01000031 Alphaproteobacteria Sphingobium fuliginis OMI [BEWI] 884611 884535 - His GTG [ENA] ¡û
>W1810400877 PYGL01000009 Alphaproteobacteria Sphingobium sp. AEW4 [PYGL] 94895 94971 + His GTG [ENA] ¡û
>C151074551 CP010954 Alphaproteobacteria Sphingobium sp. YBL2 [CP010954] 3747697 3747773 + His GTG [Ensembl] ¡û
>W10126743 AEDK01000001 Alphaproteobacteria Sphingobium chlorophenolicum L-1 [AEDK] 216077 216153 + His GTG [ENA] ¡û
>C10111682 AP010803 Alphaproteobacteria Sphingobium indicum UT26S [AP010803, AP010804] 2172041 2171965 - His GTG [Ensembl] ¡û
>W1510756949 JACT01000001 Alphaproteobacteria Sphingobium cupriresistens LL01 [JACT] 1952824 1952748 - His GTG [ENA] ¡û
>W1510941343 JFFT01000020 Alphaproteobacteria Sphingobium yanoikuyae SHJ [JFFT] 20257 20333 + His GTG [ENA] ¡û
>C11119766 CP002798 Alphaproteobacteria Sphingobium chlorophenolicum L-1 [CP002798, CP002799] 677204 677280 + His GTG [Ensembl] ¡û
>W11134004 AEDK01000001 Alphaproteobacteria Sphingobium chlorophenolicum L-1 [AEDK] 216077 216153 + His GTG [ENA] ¡û
>W1511592087 LBIC01000003 Alphaproteobacteria Sphingobium chungbukense DJ77 [LBIC] 65654 65730 + His GTG [ENA] ¡û
>W1511646468 LECE01000046 Alphaproteobacteria Sphingomonas sp. MEA3-1 [LECE] 41911 41835 - His GTG [ENA] ¡û
>W11176437 AFXE01000087 Alphaproteobacteria Sphingobium yanoikuyae XLDN2-5 [AFXE] 30369 30293 - His GTG [ENA] ¡û
>C161003349 CP005083 Alphaproteobacteria Sphingobium sp. TKS [CP005083, CP005084] 2467598 2467674 + His GTG [Ensembl] ¡û
>C161003401 CP005188 Alphaproteobacteria Sphingobium sp. MI1205 [CP005188, CP005189] 1511436 1511512 + His GTG [Ensembl] ¡û
>C161054536 CP013264 Alphaproteobacteria Sphingobium baderi DE-13 [CP013264] 2717134 2717210 + His GTG [Ensembl] ¡û
>C161092743 CP015986 Alphaproteobacteria Sphingobium sp. EP60837 [CP015986, CP015987] 317028 316952 - His GTG [Ensembl] ¡û
>C161099947 CP016591 Alphaproteobacteria Tsuneonella dongtanensis KCTC 22672 [CP016591] 2582458 2582382 - His GTG [Ensembl] ¡û
>W1610071969 BCUM01000007 Alphaproteobacteria Sphingobium cloacae NBRC 102517 [BCUM] 29093 29169 + His GTG [ENA] ¡û
>W1610076483 BCYT01000021 Alphaproteobacteria Sphingobium abikonense NBRC 16140 [BCYT] 13218 13142 - His GTG [ENA] ¡û
>W1610076878 BCZC01000002 Alphaproteobacteria Sphingobium chlorophenolicum NBRC 16172 [BCZC] 17736 17812 + His GTG [ENA] ¡û
>W1610076948 BCZD01000017 Alphaproteobacteria Sphingobium herbicidovorans NBRC 16415 [BCZD] 173101 173177 + His GTG [ENA] ¡û
>W121068948 AJVL01000026 Alphaproteobacteria Sphingobium sp. AP49 [AJVL] 31022 30946 - His GTG [ENA] ¡û
>W121071169 AJXQ01000146 Alphaproteobacteria Sphingobium indicum B90A [AJXQ] 48273 48349 + His GTG [ENA] ¡û
>W121084351 AKIB01000116 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 103186 103110 - His GTG [ENA] ¡û
>W1610609143 LFVX01000007 Alphaproteobacteria Sphingobium sp. Ndbn-10 [LFVX] 80027 80103 + His GTG [ENA] ¡û
>W1610896268 LRUK01000049 Alphaproteobacteria Sphingobium sp. AM [LRUK] 23217 23141 - His GTG [ENA] ¡û
>W1610920948 LSTR01000017 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 95715 95639 - His GTG [ENA] ¡û
>W1610922598 LSVG01000008 Alphaproteobacteria Sphingobium yanoikuyae [LSVG] 31566 31490 - His GTG [ENA] ¡û
>W1610924247 LTAB01000036 Alphaproteobacteria Sphingobium sp. 22B [LTAB] 23217 23141 - His GTG [ENA] ¡û
>W1610983682 LWES01000609 Alphaproteobacteria Erythrobacter sp. HI0028 [LWES] 11648 11572 - His GTG [ENA] ¡û
>W1611011725 LXVX01000002 Alphaproteobacteria Sphingobium sp. TCM1 [LXVX] 215051 214975 - His GTG [ENA] ¡û
>W1611013339 LXYL01000015 Alphaproteobacteria Erythrobacter sp. EhN03 [LXYL] 264675 264751 + His GTG [ENA] ¡û
>W1611016928 LYMJ01000038 Alphaproteobacteria Sphingobium sp. 20006FA paucimobilis [LYMJ] 23198 23122 - His GTG [ENA] ¡û
>W1710069171 BCUM01000007 Alphaproteobacteria Sphingobium cloacae NBRC 102517 [BCUM] 29093 29169 + His GTG [ENA] ¡û
>W1710074172 BCYT01000021 Alphaproteobacteria Sphingobium abikonense NBRC 16140 [BCYT] 13218 13142 - His GTG [ENA] ¡û
>W1710074567 BCZC01000002 Alphaproteobacteria Sphingobium chlorophenolicum NBRC 16172 [BCZC] 17736 17812 + His GTG [ENA] ¡û
>W1710074637 BCZD01000017 Alphaproteobacteria Sphingobium herbicidovorans NBRC 16415 [BCZD] 173101 173177 + His GTG [ENA] ¡û
>W1710505580 FMTU01000002 Alphaproteobacteria Sphingobium faniae [FMTU] 336204 336128 - His GTG [ENA] ¡û
>W1710542237 FNYZ01000010 Alphaproteobacteria Sphingobium sp. AP50 [FNYZ] 105482 105558 + His GTG [ENA] ¡û
>W1710551573 FOGE01000005 Alphaproteobacteria Sphingobium sp. YR768 [FOGE] 129837 129913 + His GTG [ENA] ¡û
>W1710592174 FRCG01000009 Alphaproteobacteria Sphingobium sp. YR657 [FRCG] 36764 36840 + His GTG [ENA] ¡û
>W1710730430 LFVX01000007 Alphaproteobacteria Sphingobium sp. Ndbn-10 [LFVX] 80027 80103 + His GTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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