tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.146896 (125 seq.)
>W1710808918 LKDZ01000015 Betaproteobacteria Variovorax boronicumulans [LKDZ] 18290 18366 + Gln TTG [ENA] ¡û
>W1710821648 LKTU01000034 Betaproteobacteria Variovorax paradoxus [LKTU] 3889 3813 - Gln TTG [ENA] ¡û
>W1710821691 LKTV01000039 Betaproteobacteria Variovorax paradoxus [LKTV] 3889 3813 - Gln TTG [ENA] ¡û
>W1710821748 LKTW01000112 Betaproteobacteria Variovorax paradoxus [LKTW] 28444 28520 + Gln TTG [ENA] ¡û
>W1710821792 LKTX01000028 Betaproteobacteria Variovorax paradoxus [LKTX] 4812 4736 - Gln TTG [ENA] ¡û
>W1710821848 LKTY01000065 Betaproteobacteria Variovorax paradoxus [LKTY] 3889 3813 - Gln TTG [ENA] ¡û
>W1710821903 LKTZ01000093 Betaproteobacteria Variovorax paradoxus [LKTZ] 3855 3779 - Gln TTG [ENA] ¡û
>W1710861756 LMDW01000004 Betaproteobacteria Variovorax sp. Root411 [LMDW] 4014 3938 - Gln TTG [ENA] ¡û
>W1710862488 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 65159 65235 + Gln TTG [ENA] ¡û
>W1710882335 LMTS01000193 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 56155 56079 - Gln TTG [ENA] ¡û
>W1711123828 LUJJ01000018 Betaproteobacteria Variovorax boronicumulans [LUJJ] 98497 98421 - Gln TTG [ENA] ¡û
>W1711143368 LVHG01000063 Betaproteobacteria Variovorax paradoxus [LVHG] 83953 84029 + Gln TTG [ENA] ¡û
>W1711213140 LXJZ01000101 Betaproteobacteria Paraburkholderia ginsengiterrae panaciterrae [LXJZ] 36225 36301 + Gln TTG [ENA] ¡û
>W1711250084 LYMK01000015 Betaproteobacteria Variovorax sp. JS1663 [LYMK] 110697 110773 + Gln TTG [ENA] ¡û
>W1711259828 LYVO01000057 Betaproteobacteria Variovorax sp. KK3 [LYVO] 29286 29362 + Gln TTG [ENA] ¡û
>W1711384851 MEDL01000126 Betaproteobacteria Acidovorax sp. SCN 68-22 [MEDL] 2550 2474 - Gln TTG [ENA] ¡û
>W1711386508 MEFM01000024 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 4443 4367 - Gln TTG [ENA] ¡û
>W1711387486 MEGR01000021 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 4443 4367 - Gln TTG [ENA] ¡û
>W1711506615 MKWO01000019 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 130833 130909 + Gln TTG [ENA] ¡û
>W131174621 ARIP01000046 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 85228 85152 - Gln TTG [ENA] ¡û
>W131180335 ARNA01000040 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 4031 3955 - Gln TTG [ENA] ¡û
>WENV180027034 FTIV01107180 [FTIV] metagenome; soil 47 123 + Gln TTG [ENA] ¢þ
>WENV180099392 NMRC01001370 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 992 1068 + Gln TTG [ENA] ¢þ
>WENV180693335 OCZS011163355 [OCZS] soil metagenome; soil 151 75 - Gln TTG [ENA] ¢þ
>WENV181361177 OFNH01004589 [OFNH] sediment metagenome; Lake sediment 331 407 + Gln TTG [ENA] ¢þ
>WENV181363123 OFOS01000039 [OFOS] sediment metagenome; Lake sediment 4864 4788 - Gln TTG [ENA] ¢þ
>WENV181364485 OFOW01000045 [OFOW] sediment metagenome; Lake sediment 6365 6441 + Gln TTG [ENA] ¢þ
>WENV181364550 OFOY01000027 [OFOY] sediment metagenome; Lake sediment 10623 10547 - Gln TTG [ENA] ¢þ
>WENV181364600 OFOZ01000125 [OFOZ] sediment metagenome; Lake sediment 8558 8482 - Gln TTG [ENA] ¢þ
>WENV181364661 OFPA01000045 [OFPA] sediment metagenome; Lake sediment 29704 29780 + Gln TTG [ENA] ¢þ
>WENV181364715 OFPB01000033 [OFPB] sediment metagenome; Lake sediment 29704 29780 + Gln TTG [ENA] ¢þ
>WENV181364796 OFPD01000284 [OFPD] sediment metagenome; Lake sediment 1770 1694 - Gln TTG [ENA] ¢þ
>WENV181364836 OFPE01001123 [OFPE] sediment metagenome; Lake sediment 894 970 + Gln TTG [ENA] ¢þ
>WENV181365003 OFPH01000156 [OFPH] sediment metagenome; Lake sediment 3113 3189 + Gln TTG [ENA] ¢þ
>WENV181365055 OFPI01000065 [OFPI] sediment metagenome; Lake sediment 5043 4967 - Gln TTG [ENA] ¢þ
>WENV181365102 OFPJ01000108 [OFPJ] sediment metagenome; Lake sediment 1022 1098 + Gln TTG [ENA] ¢þ
>WENV181365152 OFPK01000037 [OFPK] sediment metagenome; Lake sediment 10623 10547 - Gln TTG [ENA] ¢þ
>WENV181365195 OFPL01000045 [OFPL] sediment metagenome; Lake sediment 10623 10547 - Gln TTG [ENA] ¢þ
>WENV181365297 OFPN01000051 [OFPN] sediment metagenome; Lake sediment 10623 10547 - Gln TTG [ENA] ¢þ
>WENV181365307 OFPO01000007 [OFPO] sediment metagenome; Lake sediment 15756 15680 - Gln TTG [ENA] ¢þ
>WENV181365376 OFPP01001008 [OFPP] sediment metagenome; Lake sediment 276 352 + Gln TTG [ENA] ¢þ
>WENV181365406 OFPQ01000532 [OFPQ] sediment metagenome; Lake sediment 1054 1130 + Gln TTG [ENA] ¢þ
>W141170121 AXXB01000011 Betaproteobacteria Variovorax sp. JGI 0001016-C20 [AXXB] 12622 12546 - Gln TTG [ENA] ¡û
>WENV183735125 PJUA01001167 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 4819 4895 + Gln TTG [ENA] ¢þ
>WENV183735667 PJUB01000385 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 15405 15481 + Gln TTG [ENA] ¢þ
>WENV183736316 PJUC01000588 [PJUC] soil metagenome; Soil enriched on filter paper 7950 8026 + Gln TTG [ENA] ¢þ
>WENV183741620 PJUG01000213 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 15851 15927 + Gln TTG [ENA] ¢þ
>WENV183742111 PJUH01000315 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 15851 15927 + Gln TTG [ENA] ¢þ
>WENV183744307 PJUK01006318 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 535 459 - Gln TTG [ENA] ¢þ
>WENV170559543 CXWL01127800 [CXWL] groundwater metagenome; biofilm material 6428 6504 + Gln TTG [ENA] ¢þ
>WENV170706795 LNAP01006792 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 8341 8417 + Gln TTG [ENA] ¢þ
>WENV171003306 NNBT01003987 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 302 226 - Gln TTG [ENA] ¢þ
>WENV171003579 NNBU01000585 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 2428 2504 + Gln TTG [ENA] ¢þ
>WENV171003710 NNBV01000461 [NNBV] plant metagenome; symbiotic tissue sample KVS11 6227 6151 - Gln TTG [ENA] ¢þ
>C181078475 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 5922758 5922834 + Gln TTG - ¡û
>C181109164 CP024941 Betaproteobacteria Paraburkholderia terricola mHS1 [CP024941, CP024942] 378972 378896 - Gln TTG - ¡û
>C181158562 CP027669 Betaproteobacteria Simplicispira suum SC1-8 [CP027669] 780018 780094 + Gln TTG - ¡û
>C181159392 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 5136121 5136045 - Gln TTG - ¡û
>W141558074 JHVQ01000005 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 351311 351387 + Gln TTG [ENA] ¡û
>W09119958 ACEE01000055 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 32659 32735 + Gln TTG [ENA] ¡û
>C09111104 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 4591860 4591936 + Gln TTG [Ensembl] ¡û
>C141002551 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 4764555 4764631 + Gln TTG [Ensembl] ¡û
>W1910792835 MRCN01000012 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 25598 25522 - Gln TTG [ENA] ¡û
>W1911496718 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 1515504 1515428 - Gln TTG [ENA] ¡û
>W1911647348 QAJK01000065 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 89452 89528 + Gln TTG [ENA] ¡û
>W1911709240 QPIB01000043 Betaproteobacteria Xenophilus sp. E41 [QPIB] 341541 341465 - Gln TTG [ENA] ¡û
>W1911770739 QXJC01000003 Betaproteobacteria Simplicispira hankyongi NY-02 [QXJC] 544802 544878 + Gln TTG [ENA] ¡û
>W1911775318 QXMN01000023 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 103205 103281 + Gln TTG [ENA] ¡û
>W1810046180 NNBQ01000003 Betaproteobacteria Variovorax sp. B4 [NNBQ] 80687 80763 + Gln TTG [ENA] ¡û
>W1810046283 NNBR01000004 Betaproteobacteria Variovorax sp. B2 [NNBR] 80688 80764 + Gln TTG [ENA] ¡û
>W1810072213 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 2139998 2140074 + Gln TTG [ENA] ¡û
>W1810192714 PKMT01000001 Betaproteobacteria Variovorax sp. RO1 [PKMT] 615202 615126 - Gln TTG [ENA] ¡û
>W1810392048 PXZZ01000024 Betaproteobacteria Variovorax sp. WS11 [PXZZ] 27925 28001 + Gln TTG [ENA] ¡û
>W1810486688 QAYA01000026 Betaproteobacteria Variovorax sp. GV040 [QAYA] 4152 4076 - Gln TTG [ENA] ¡û
>W1810573116 QEKM01000001 Betaproteobacteria Simplicispira sp. 125 [QEKM] 81776 81700 - Gln TTG [ENA] ¡û
>W1810577523 QEOH01000004 Betaproteobacteria Variovorax sp. GV014 [QEOH] 222889 222965 + Gln TTG [ENA] ¡û
>W1810672559 QJTM01000024 Betaproteobacteria Variovorax sp. GV035 [QJTM] 4152 4076 - Gln TTG [ENA] ¡û
>W1810676127 QKLT01000027 Betaproteobacteria Variovorax sp. GV042 [QKLT] 4152 4076 - Gln TTG [ENA] ¡û
>W1810682492 QKUE01000024 Betaproteobacteria Variovorax sp. GV004 [QKUE] 46654 46730 + Gln TTG [ENA] ¡û
>W1810884779 QUMV01000001 Betaproteobacteria Simplicispira sp. 110 [QUMV] 426031 425955 - Gln TTG [ENA] ¡û
>SRA1015232 SRR023845.510772 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 180 104 - Gln TTG [SRA]
>SRA1015975 SRR023846.291949 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 21 97 + Gln TTG [SRA]
>C151004849 CP003863 Betaproteobacteria Paraburkholderia phenoliruptrix BR3459a [CP003863, CP003864] 315636 315560 - Gln TTG [Ensembl] ¡û
>W1511352986 JROV01001521 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 612 688 + Gln TTG [ENA] ¡û
>C11123583 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 5443353 5443429 + Gln TTG [Ensembl] ¡û
>W1511508954 JXQQ01000136 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 25423 25499 + Gln TTG [ENA] ¡û
>W1511555007 JZWI01000021 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 48937 49013 + Gln TTG [ENA] ¡û
>W121084969 AKIW01000064 Betaproteobacteria Variovorax sp. CF313 [AKIW] 27660 27736 + Gln TTG [ENA] ¡û
>W1610047755 BBDP01000486 Betaproteobacteria Variovorax sp. RA8 [BBDP] 726 802 + Gln TTG [ENA] ¡û
>W1610072166 BCUS01000051 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 3182 3106 - Gln TTG [ENA] ¡û
>W1610072219 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 263319 263243 - Gln TTG [ENA] ¡û
>W1610072238 BCUU01000003 Betaproteobacteria Variovorax soli NBRC 106424 [BCUU] 107694 107770 + Gln TTG [ENA] ¡û
>W1610685610 LKTU01000034 Betaproteobacteria Variovorax paradoxus [LKTU] 3889 3813 - Gln TTG [ENA] ¡û
>W1610685653 LKTV01000039 Betaproteobacteria Variovorax paradoxus [LKTV] 3889 3813 - Gln TTG [ENA] ¡û
>W1610685710 LKTW01000112 Betaproteobacteria Variovorax paradoxus [LKTW] 28444 28520 + Gln TTG [ENA] ¡û
>W1610685754 LKTX01000028 Betaproteobacteria Variovorax paradoxus [LKTX] 4812 4736 - Gln TTG [ENA] ¡û
>W1610685810 LKTY01000065 Betaproteobacteria Variovorax paradoxus [LKTY] 3889 3813 - Gln TTG [ENA] ¡û
>W1610685865 LKTZ01000093 Betaproteobacteria Variovorax paradoxus [LKTZ] 3855 3779 - Gln TTG [ENA] ¡û
>W1610724102 LMDW01000004 Betaproteobacteria Variovorax sp. Root411 [LMDW] 4014 3938 - Gln TTG [ENA] ¡û
>W1610724834 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 65159 65235 + Gln TTG [ENA] ¡û
>W1610744261 LMTS01000193 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 56155 56079 - Gln TTG [ENA] ¡û
>W1610954376 LVHG01000063 Betaproteobacteria Variovorax paradoxus [LVHG] 83953 84029 + Gln TTG [ENA] ¡û
>W1611000144 LXJZ01000101 Betaproteobacteria Paraburkholderia ginsengiterrae panaciterrae [LXJZ] 36225 36301 + Gln TTG [ENA] ¡û
>W1710044265 BBDP01000486 Betaproteobacteria Variovorax sp. RA8 [BBDP] 726 802 + Gln TTG [ENA] ¡û
>W1710069368 BCUS01000051 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 3182 3106 - Gln TTG [ENA] ¡û
>W1710069421 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 263319 263243 - Gln TTG [ENA] ¡û
>W1710069440 BCUU01000003 Betaproteobacteria Variovorax soli NBRC 106424 [BCUU] 107694 107770 + Gln TTG [ENA] ¡û
>W1710506217 FMUJ01000012 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 12232 12308 + Gln TTG [ENA] ¡û
>W1710512951 FMZU01000015 Betaproteobacteria Variovorax sp. CF079 [FMZU] 151664 151740 + Gln TTG [ENA] ¡û
>W1710517935 FNDR01000004 Betaproteobacteria Variovorax sp. OV700 [FNDR] 146245 146321 + Gln TTG [ENA] ¡û
>W1710530054 FNOL01000035 Betaproteobacteria Variovorax sp. YR634 [FNOL] 45794 45870 + Gln TTG [ENA] ¡û
>W1710531388 FNPM01000017 Betaproteobacteria Variovorax sp. YR266 [FNPM] 6558 6482 - Gln TTG [ENA] ¡û
>W1710534033 FNRO01000003 Betaproteobacteria Variovorax sp. YR216 [FNRO] 594363 594287 - Gln TTG [ENA] ¡û
>W1710538181 FNUI01000031 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 27928 28004 + Gln TTG [ENA] ¡û
>W1710539592 FNVM01000033 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 3757 3681 - Gln TTG [ENA] ¡û
>W1710542728 FNZJ01000013 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 197127 197203 + Gln TTG [ENA] ¡û
>W1710545326 FOBJ01000027 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 3853 3777 - Gln TTG [ENA] ¡û
>W1710554318 FOII01000025 Betaproteobacteria Variovorax sp. OV084 [FOII] 4019 3943 - Gln TTG [ENA] ¡û
>W1710557173 FOKS01000033 Betaproteobacteria Variovorax sp. NFACC26 [FOKS] 28117 28193 + Gln TTG [ENA] ¡û
>W1710558169 FOLP01000013 Betaproteobacteria Variovorax sp. OK212 [FOLP] 197127 197203 + Gln TTG [ENA] ¡û
>W1710562289 FOOV01000045 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 28113 28189 + Gln TTG [ENA] ¡û
>W1710569268 FOUG01000010 Betaproteobacteria Variovorax sp. OV329 [FOUG] 180777 180853 + Gln TTG [ENA] ¡û
>W1710571844 FOWG01000001 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 1207405 1207481 + Gln TTG [ENA] ¡û
>W1710572141 FOWL01000016 Betaproteobacteria Variovorax sp. OK605 [FOWL] 123923 123847 - Gln TTG [ENA] ¡û
>W1710573302 FOXJ01000004 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 173558 173482 - Gln TTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK