tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.147087 (109 seq.)
>W1710797143 LJSU01000015 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO07 [LJSU] 33304 33228 - His GTG [ENA] ¡û
>W1710922267 LOAS01000013 Alphaproteobacteria Aliiruegeria sabulilitoris [LOAS] 191274 191198 - His GTG [ENA] ¡û
>W1710996636 LQBP01000003 Alphaproteobacteria Ruegeria profundi ZGT108 [LQBP] 169272 169348 + His GTG [ENA] ¡û
>W1710996685 LQBQ01000012 Alphaproteobacteria Ruegeria marisrubri ZGT118 [LQBQ] 352903 352979 + His GTG [ENA] ¡û
>W1711357120 MDHA01000021 Alphaproteobacteria Thioclava sp. SK-1 [MDHA] 247610 247534 - His GTG [ENA] ¡û
>C171108690 CP020474 Alphaproteobacteria Roseovarius mucosus SMR3 [CP020474] 1178307 1178231 - His GTG - ¡û
>W131164655 ARAY01000015 Alphaproteobacteria Wenxinia marina DSM 24838 [ARAY] 10472 10396 - His GTG [ENA] ¡û
>W131155860 AQOX01000005 Alphaproteobacteria Limimaricola hongkongensis DSM 17492 [AQOX] 186756 186832 + His GTG [ENA] ¡û
>C023187 CP000031 Alphaproteobacteria Ruegeria pomeroyi DSS-3 [CP000031] 1886364 1886440 + His GTG [Ensembl] ¡û
>w027735 ABCL01000003 Alphaproteobacteria Roseovarius sp. TM1035 [ABCL] 310690 310612 - His GTG [ENA] ¡û
>w012868 AAMV01000005 Alphaproteobacteria Roseovarius sp. 217 [AAMV] 13350 13272 - His GTG [ENA] ¡û
>w012526 AAMO01000004 Alphaproteobacteria Pseudooceanicola batsensis HTCC2597 [AAMO] 90209 90287 + His GTG [ENA] ¡û
>WENV180115741 OAPT01028061 [OAPT] marine metagenome; seawater 226 302 + His GTG [ENA] ¢þ
>WENV180294276 OBIY01058231 [OBIY] beach sand metagenome; beach sand 129 205 + His GTG [ENA] ¢þ
>WENV181234079 OFET01002102 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 2129 2053 - His GTG [ENA] ¢þ
>WENV181234137 OFET01008367 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 492 416 - His GTG [ENA] ¢þ
>WENV181234470 OFEU01000187 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 24394 24318 - His GTG [ENA] ¢þ
>WENV182549101 OJBX01019193 [OJBX] seawater metagenome; Sea water 262 186 - His GTG [ENA] ¢þ
>WENV182591747 OJIO01003493 [OJIO] seawater metagenome; Sea water 1335 1259 - His GTG [ENA] ¢þ
>WENV183704242 PDWI01000110 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 94765 94841 + His GTG [ENA] ¢þ
>WENV183716586 PDWJ01000058 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 47074 46998 - His GTG [ENA] ¢þ
>WENV183749120 PPFU01122172 [PPFU] hypolithon metagenome; Antarctic Hypolithon 4220 4144 - His GTG [ENA] ¢þ
>WENV170229689 CEQG01148915 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 651 575 - His GTG [ENA] ¢þ
>WENV170269081 CERH01038373 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2234 2310 + His GTG [ENA] ¢þ
>WENV170668258 LADL02002177 [LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole 14201 14125 - His GTG [ENA] ¢þ
>WENV170705284 LLEQ01003083 [LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 466 542 + His GTG [ENA] ¢þ
>WENV170729430 LULF01035055 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 309 385 + His GTG [ENA] ¢þ
>WENV170755938 LUMO01000741 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 3580 3504 - His GTG [ENA] ¢þ
>WENV170756121 LUMO01006981 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 975 1051 + His GTG [ENA] ¢þ
>WENV170759222 LUMS01006602 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 406 482 + His GTG [ENA] ¢þ
>WENV170825952 MDSY01102566 [MDSY] marine metagenome; seawater 2839 2763 - His GTG [ENA] ¢þ
>WENV170893784 MDTD01056385 [MDTD] marine metagenome; seawater 6040 5964 - His GTG [ENA] ¢þ
>WENV170940208 MDTG01339480 [MDTG] marine metagenome; seawater 5268 5344 + His GTG [ENA] ¢þ
>WENV170963630 MRWG01000402 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 21627 21703 + His GTG [ENA] ¢þ
>C181158400 CP027665 Alphaproteobacteria Pukyongiella litopenaei SH-1 [CP027665] 212430 212354 - His GTG - ¡û
>C181188006 CP030099 Alphaproteobacteria Roseovarius sp. AK1035 [CP030099] 104351 104275 - His GTG - ¡û
>C191020042 CP022303 Alphaproteobacteria Thalassococcus sp. S3 [CP022303] 2944112 2944036 - His GTG - ¡û
>C191083108 CP031946 Alphaproteobacteria Ruegeria sp. AD91A [CP031946] 1582062 1581986 - His GTG - ¡û
>C191127879 CP034588 Alphaproteobacteria Silicimonas algicola KC90 [CP034588] 1012567 1012491 - His GTG - ¡û
>W141562451 JHZF01000011 Alphaproteobacteria Pseudooceanicola nanhaiensis DSM 18065 [JHZF] 275282 275358 + His GTG [ENA] ¡û
>W09118396 ACCW01000036 Alphaproteobacteria Rhodobacteraceae bacterium KLH11 [ACCW] 304663 304739 + His GTG [ENA] ¡û
>W09132611 ACNX01000045 Alphaproteobacteria Ruegeria lacuscaerulensis ITI-1157 [ACNX] 172437 172361 - His GTG [ENA] ¡û
>W141818711 JQLS01000008 Alphaproteobacteria Roseovarius sp. MCTG156(2b) [JQLS] 588169 588245 + His GTG [ENA] ¡û
>W1910443147 FWFV01000001 Alphaproteobacteria Palleronia marisminoris CECT 7066 [FWFV] 317882 317806 - His GTG [ENA] ¡û
>W1910443296 FWFY01000004 Alphaproteobacteria Limimaricola soesokkakensis CECT 8367 [FWFY] 147820 147744 - His GTG [ENA] ¡û
>W1910499803 FXYG01000001 Alphaproteobacteria Ruegeria arenilitoris CECT 8715 [FXYG] 155329 155405 + His GTG [ENA] ¡û
>W1910548989 FZOY01000002 Alphaproteobacteria Tropicimonas sediminicola DSM 29339 [FZOY] 291178 291254 + His GTG [ENA] ¡û
>W1911189721 NQWH01000023 Alphaproteobacteria Limimaricola cinnabarinus XM1 [NQWH] 36583 36507 - His GTG [ENA] ¡û
>W1911492689 OBEA01000007 Alphaproteobacteria Pseudooceanicola antarcticus CGMCC 1.12662 [OBEA] 3313 3237 - His GTG [ENA] ¡û
>W1911638532 PVWS01000013 Alphaproteobacteria Roseovarius sp. A46 [PVWS] 84968 84892 - His GTG [ENA] ¡û
>W1911653466 QDFI01000025 Alphaproteobacteria Phycocomes zhengii LMIT002 [QDFI] 20674 20598 - His GTG [ENA] ¡û
>W1911696555 QMEK01000001 Alphaproteobacteria Tropicimonas sp. IMCC34043 [QMEK] 832446 832370 - His GTG [ENA] ¡û
>W1911747132 QWDA01000001 Alphaproteobacteria Paracoccaceae bacterium IMCC 34051 [QWDA] 209164 209240 + His GTG [ENA] ¡û
>W1911813295 QZEX01000005 Alphaproteobacteria Chachezhania antarctica SM1703 [QZEX] 334164 334088 - His GTG [ENA] ¡û
>W1810061276 PDNI01000065 Alphaproteobacteria Roseovarius nitratireducens TFZ [PDNI] 355040 354964 - His GTG [ENA] ¡û
>W1810101660 PGTB01000087 Alphaproteobacteria Pseudooceanicola lipolyticus 157 [PGTB] 9489 9565 + His GTG [ENA] ¡û
>W1810101741 PGTD01000012 Alphaproteobacteria Pseudooceanicola antarcticus Ar-45 [PGTD] 4421 4345 - His GTG [ENA] ¡û
>W1810120326 PHSN01000002 Alphaproteobacteria Acidimangrovimonas sediminis MS2-2 [PHSN] 59263 59339 + His GTG [ENA] ¡û
>W1810364325 PVTD01000002 Alphaproteobacteria Aliiruegeria haliotis DSM 29328 [PVTD] 180485 180561 + His GTG [ENA] ¡û
>W1810400385 PYGB01000004 Alphaproteobacteria Limimaricola soesokkakensis DSM 29956 [PYGB] 275858 275934 + His GTG [ENA] ¡û
>W1810504500 QBKZ01000001 Alphaproteobacteria Mangrovicoccus ximenensis T1lg56 [QBKZ] 233226 233302 + His GTG [ENA] ¡û
>W1810570029 QEHM01000008 Alphaproteobacteria Albibacillus kandeliae J95 [QEHM] 250478 250402 - His GTG [ENA] ¡û
>W1810578026 QEOS01000006 Alphaproteobacteria Phaeobacter sp. JL2872 JL2872 [QEOS] 82722 82646 - His GTG [ENA] ¡û
>W1810596831 QGGV01000001 Alphaproteobacteria Silicimonas algicola DSM 103371 [QGGV] 729796 729720 - His GTG [ENA] ¡û
>W1810603206 QGKU01000002 Alphaproteobacteria Meridianimarinicoccus roseus TG-679 [QGKU] 50075 50151 + His GTG [ENA] ¡û
>W1810672082 QJTE01000001 Alphaproteobacteria Pseudoroseicyclus aestuarii CECT 9025 [QJTE] 506983 507059 + His GTG [ENA] ¡û
>W1810692300 QLIW01000008 Alphaproteobacteria Rhodobacteraceae bacterium AsT-22 [QLIW] 43534 43610 + His GTG [ENA] ¡û
>W1511482900 JWLJ01000001 Alphaproteobacteria Ruegeria sp. ANG-R [JWLJ] 440422 440498 + His GTG [ENA] ¡û
>W1511482948 JWLK01000001 Alphaproteobacteria Ruegeria sp. ANG-S4 [JWLK] 1503987 1504063 + His GTG [ENA] ¡û
>W1511564683 LADY01000020 Alphaproteobacteria Roseovarius sp. BRH_c41 [LADY] 96930 96854 - His GTG [ENA] ¡û
>W1511564709 LADY01000064 Alphaproteobacteria Roseovarius sp. BRH_c41 [LADY] 231160 231236 + His GTG [ENA] ¡û
>W11152726 AEYW01000013 Alphaproteobacteria Ruegeria conchae TW15 [AEYW] 369074 369150 + His GTG [ENA] ¡û
>W1511686494 LFTY01000001 Alphaproteobacteria Candidatus Rhodobacter lobularis symbiont of Oscarella lobularis [LFTY] 730943 731019 + His GTG [ENA] ¡û
>W11157615 AFCF01000011 Alphaproteobacteria Leisingera sp. ANG1 ANG1 [AFCF] 94969 94893 - His GTG [ENA] ¡û
>C161083471 CP015124 Alphaproteobacteria Phaeobacter gallaeciensis JL2886 [CP015124] 3452454 3452530 + His GTG - ¡û
>W1610014758 AONG01000018 Alphaproteobacteria Wenxinia marina DSM 24838 [AONG] 10476 10400 - His GTG [ENA] ¡û
>W1610014781 AONH01000010 Alphaproteobacteria Roseovarius mucosus DSM 17069 [AONH] 295720 295796 + His GTG [ENA] ¡û
>W1610094951 CYUD01000003 Alphaproteobacteria Ruegeria denitrificans CECT 5091 [CYUD] 121746 121822 + His GTG [ENA] ¡û
>WENV071087 AACY023834730 Marine microbial communities from Global Ocean Sampling (GOS) 262 340 + His GTG [ENA]
>W1610661100 LJSU01000015 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO07 [LJSU] 33304 33228 - His GTG [ENA] ¡û
>W1610779746 LOAS01000013 Alphaproteobacteria Aliiruegeria sabulilitoris [LOAS] 191274 191198 - His GTG [ENA] ¡û
>W1610851293 LQBP01000003 Alphaproteobacteria Ruegeria profundi ZGT108 [LQBP] 169272 169348 + His GTG [ENA] ¡û
>W1610851342 LQBQ01000012 Alphaproteobacteria Ruegeria marisrubri ZGT118 [LQBQ] 352903 352979 + His GTG [ENA] ¡û
>W1710011649 AONG01000018 Alphaproteobacteria Wenxinia marina DSM 24838 [AONG] 10476 10400 - His GTG [ENA] ¡û
>W1710011672 AONH01000010 Alphaproteobacteria Roseovarius mucosus DSM 17069 [AONH] 295720 295796 + His GTG [ENA] ¡û
>W1710015366 AQQP01000012 Alphaproteobacteria Phaeobacter sp. 22II1-1F12B [AQQP] 154191 154115 - His GTG [ENA] ¡û
>W1710015578 AQQU01000004 Alphaproteobacteria Oceanicola sp. 22II-s10i [AQQU] 162611 162687 + His GTG [ENA] ¡û
>W1710083040 BDIY01000003 Alphaproteobacteria Roseovarius sp. A-2 [BDIY] 232560 232636 + His GTG [ENA] ¡û
>W1710513001 FMZV01000004 Alphaproteobacteria Ruegeria marina [FMZV] 235009 234933 - His GTG [ENA] ¡û
>W1710514185 FNAT01000002 Alphaproteobacteria Limimaricola pyoseonensis [FNAT] 365746 365822 + His GTG [ENA] ¡û
>W1710514436 FNAY01000001 Alphaproteobacteria Rhodobacter capsulatus [FNAY] 207331 207407 + His GTG [ENA] ¡û
>W1710518504 FNEB01000003 Alphaproteobacteria Lutimaribacter saemankumensis [FNEB] 223488 223564 + His GTG [ENA] ¡û
>W1710519030 FNEK01000160 Alphaproteobacteria Aliiruegeria lutimaris [FNEK] 174 98 - His GTG [ENA] ¡û
>W1710524239 FNIO01000005 Alphaproteobacteria Lutimaribacter pacificus [FNIO] 253165 253241 + His GTG [ENA] ¡û
>W1710538992 FNUZ01000001 Alphaproteobacteria Thalassococcus halodurans [FNUZ] 379338 379262 - His GTG [ENA] ¡û
>W1710541205 FNYD01000005 Alphaproteobacteria Cribrihabitans marinus [FNYD] 259729 259653 - His GTG [ENA] ¡û
>W1710542601 FNZG01000004 Alphaproteobacteria Pseudooceanicola nitratireducens [FNZG] 363752 363676 - His GTG [ENA] ¡û
>W1710543728 FOAG01000003 Alphaproteobacteria Roseovarius azorensis [FOAG] 338493 338417 - His GTG [ENA] ¡û
>W1710545536 FOBO01000010 Alphaproteobacteria Roseovarius tolerans [FOBO] 113853 113929 + His GTG [ENA] ¡û
>W1710548356 FODS01000007 Alphaproteobacteria Salinihabitans flavidus [FODS] 151172 151248 + His GTG [ENA] ¡û
>W1710557729 FOLG01000008 Alphaproteobacteria Tropicimonas isoalkanivorans [FOLG] 128575 128651 + His GTG [ENA] ¡û
>W1710558472 FOLX01000001 Alphaproteobacteria Pseudooceanicola nitratireducens [FOLX] 2201881 2201805 - His GTG [ENA] ¡û
>W1710562802 FOPF01000001 Alphaproteobacteria Palleronia marisminoris [FOPF] 318070 317994 - His GTG [ENA] ¡û
>W1710574563 FOYI01000006 Alphaproteobacteria Poseidonocella sedimentorum [FOYI] 80590 80666 + His GTG [ENA] ¡û
>W1710584247 FQVK01000022 Alphaproteobacteria Ruegeria intermedia [FQVK] 61786 61862 + His GTG [ENA] ¡û
>W1710587276 FQYJ01000001 Alphaproteobacteria Ruegeria lacuscaerulensis ITI-1157 [FQYJ] 545367 545443 + His GTG [ENA] ¡û
>W1710589244 FQZZ01000003 Alphaproteobacteria Lutimaribacter pacificus [FQZZ] 287736 287660 - His GTG [ENA] ¡û
>W1710594754 FSRL01000001 Alphaproteobacteria Vannielia litorea litoreus [FSRL] 746139 746215 + His GTG [ENA] ¡û
>W1710609084 FXBQ01000001 Alphaproteobacteria Maritimibacter sp. HL-12 [FXBQ] 2962420 2962496 + His GTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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