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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.147146 (242 seq.)
>W1710822177
LKUR01000001
Actinomycetota
Bifidobacterium bifidum [LKUR]
152782
152858
+
Arg
ACG
[ENA]
¡û
>W1711048315
LRPO01000024
Actinomycetota
Bifidobacterium bifidum [LRPO]
1612
1536
-
Arg
ACG
[ENA]
¡û
>W1711048316
LRPO01000024
Actinomycetota
Bifidobacterium bifidum [LRPO]
1498
1422
-
Arg
ACG
[ENA]
¡û
>W1711082553
LSUI01000022
Actinomycetota
Bifidobacterium bifidum [LSUI]
1532
1456
-
Arg
ACG
[ENA]
¡û
>W1711082645
LSUL01000003
Actinomycetota
Bifidobacterium bifidum [LSUL]
46904
46828
-
Arg
ACG
[ENA]
¡û
>W1711577726
MNQB01000027
Actinomycetota
Bifidobacterium bifidum [MNQB]
20017
20093
+
Arg
ACG
[ENA]
¡û
>W1711938027
NAQK01000004
Actinomycetota
Bifidobacterium bifidum [NAQK]
54223
54147
-
Arg
ACG
[ENA]
¡û
>W1711959096
NBYL01000003
Actinomycetota
Bifidobacterium bifidum [NBYL]
49574
49650
+
Arg
ACG
[ENA]
¡û
>W131043475
AMPL01000160
Actinomycetota
Bifidobacterium bifidum LMG 13195 [AMPL]
221
145
-
Arg
ACG
[ENA]
¡û
>W131043476
AMPL01000160
Actinomycetota
Bifidobacterium bifidum LMG 13195 [AMPL]
98
22
-
Arg
ACG
[ENA]
¡û
>W131043511
AMPM01000191
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [AMPM]
3868
3792
-
Arg
ACG
[ENA]
¡û
>WENV180136531
OATN01000059
[OATN] human gut metagenome; faeces
24751
24825
+
Arg
ACG
[ENA]
¢þ
>WENV180136932
OATO01000023
[OATO] human gut metagenome; faeces
26901
26975
+
Arg
ACG
[ENA]
¢þ
>WENV180144702
OAUB01000116
[OAUB] human gut metagenome; faeces
2624
2698
+
Arg
ACG
[ENA]
¢þ
>WENV180144703
OAUB01000116
[OAUB] human gut metagenome; faeces
2727
2801
+
Arg
ACG
[ENA]
¢þ
>WENV180151956
OAUP01000722
[OAUP] human gut metagenome; faeces
2045
2119
+
Arg
ACG
[ENA]
¢þ
>WENV180152970
OAUR01000069
[OAUR] human gut metagenome; faeces
25871
25945
+
Arg
ACG
[ENA]
¢þ
>WENV180152971
OAUR01000069
[OAUR] human gut metagenome; faeces
25974
26048
+
Arg
ACG
[ENA]
¢þ
>WENV180152977
OAUR01000087
[OAUR] human gut metagenome; faeces
26193
26267
+
Arg
ACG
[ENA]
¢þ
>WENV180152978
OAUR01000087
[OAUR] human gut metagenome; faeces
26316
26390
+
Arg
ACG
[ENA]
¢þ
>WENV180163051
OAVH01000751
[OAVH] human gut metagenome; faeces
9719
9793
+
Arg
ACG
[ENA]
¢þ
>WENV180165065
OAVK01000030
[OAVK] human gut metagenome; faeces
96647
96573
-
Arg
ACG
[ENA]
¢þ
>WENV180165762
OAVL01000018
[OAVL] human gut metagenome; faeces
98196
98122
-
Arg
ACG
[ENA]
¢þ
>WENV180171196
OAVW01000010
[OAVW] human gut metagenome; faeces
60749
60675
-
Arg
ACG
[ENA]
¢þ
>WENV180172128
OAVX01000298
[OAVX] human gut metagenome; faeces
24734
24808
+
Arg
ACG
[ENA]
¢þ
>WENV180173849
OAWA01001064
[OAWA] human gut metagenome; faeces
4508
4434
-
Arg
ACG
[ENA]
¢þ
>WENV180175936
OAWC01003971
[OAWC] human gut metagenome; faeces
856
782
-
Arg
ACG
[ENA]
¢þ
>WENV180175937
OAWC01003971
[OAWC] human gut metagenome; faeces
753
679
-
Arg
ACG
[ENA]
¢þ
>WENV180185793
OAWU01000166
[OAWU] human gut metagenome; faeces
14433
14359
-
Arg
ACG
[ENA]
¢þ
>WENV180188746
OAWX01001276
[OAWX] human gut metagenome; faeces
1468
1394
-
Arg
ACG
[ENA]
¢þ
>WENV180193328
OAZW01000384
[OAZW] human gut metagenome; faeces
20843
20917
+
Arg
ACG
[ENA]
¢þ
>WENV180193329
OAZW01000384
[OAZW] human gut metagenome; faeces
20946
21020
+
Arg
ACG
[ENA]
¢þ
>WENV180420781
OBVP01000024
[OBVP] human gut metagenome; faeces
98274
98200
-
Arg
ACG
[ENA]
¢þ
>WENV180427398
OBWA01002352
[OBWA] human gut metagenome; faeces
1940
2014
+
Arg
ACG
[ENA]
¢þ
>WENV180427399
OBWA01002352
[OBWA] human gut metagenome; faeces
2043
2117
+
Arg
ACG
[ENA]
¢þ
>WENV180432000
OBWI01000104
[OBWI] human gut metagenome; faeces
21093
21019
-
Arg
ACG
[ENA]
¢þ
>WENV180432001
OBWI01000104
[OBWI] human gut metagenome; faeces
20990
20916
-
Arg
ACG
[ENA]
¢þ
>WENV180436611
OBWN01000336
[OBWN] human gut metagenome; faeces
11570
11496
-
Arg
ACG
[ENA]
¢þ
>WENV180436612
OBWN01000336
[OBWN] human gut metagenome; faeces
11467
11393
-
Arg
ACG
[ENA]
¢þ
>WENV180437241
OBWO01001562
[OBWO] human gut metagenome; faeces
3683
3609
-
Arg
ACG
[ENA]
¢þ
>WENV180441103
OBWW01000023
[OBWW] human gut metagenome; faeces
63446
63372
-
Arg
ACG
[ENA]
¢þ
>WENV180448234
OBXE01001838
[OBXE] human gut metagenome; faeces
2618
2692
+
Arg
ACG
[ENA]
¢þ
>WENV180448235
OBXE01001838
[OBXE] human gut metagenome; faeces
2721
2795
+
Arg
ACG
[ENA]
¢þ
>WENV180452556
OBXK01000016
[OBXK] human gut metagenome; faeces
65523
65597
+
Arg
ACG
[ENA]
¢þ
>WENV180454278
OBXM01016700
[OBXM] human gut metagenome; faeces
54
128
+
Arg
ACG
[ENA]
¢þ
>WENV180459332
OBXX01000079
[OBXX] human gut metagenome; faeces
60759
60685
-
Arg
ACG
[ENA]
¢þ
>WENV180464970
OBYE01000033
[OBYE] human gut metagenome; faeces
30904
30830
-
Arg
ACG
[ENA]
¢þ
>WENV180464971
OBYE01000033
[OBYE] human gut metagenome; faeces
30801
30727
-
Arg
ACG
[ENA]
¢þ
>WENV180465043
OBYE01000168
[OBYE] human gut metagenome; faeces
3
77
+
Arg
ACG
[ENA]
¢þ
>WENV180465051
OBYE01000179
[OBYE] human gut metagenome; faeces
113
187
+
Arg
ACG
[ENA]
¢þ
>WENV180465181
OBYE01015861
[OBYE] human gut metagenome; faeces
156
82
-
Arg
ACG
[ENA]
¢þ
>WENV180473663
OBYR01000874
[OBYR] human gut metagenome; faeces
13224
13298
+
Arg
ACG
[ENA]
¢þ
>WENV180475015
OBYU01000045
[OBYU] human gut metagenome; faeces
108158
108232
+
Arg
ACG
[ENA]
¢þ
>WENV180475017
OBYU01000045
[OBYU] human gut metagenome; faeces
14452
14378
-
Arg
ACG
[ENA]
¢þ
>WENV180491925
OBZW01000090
[OBZW] human gut metagenome; faeces
73379
73305
-
Arg
ACG
[ENA]
¢þ
>WENV180493007
OBZY01000088
[OBZY] human gut metagenome; faeces
1899
1973
+
Arg
ACG
[ENA]
¢þ
>WENV180493008
OBZY01000088
[OBZY] human gut metagenome; faeces
2002
2076
+
Arg
ACG
[ENA]
¢þ
>WENV180493155
OBZY01000513
[OBZY] human gut metagenome; faeces
11452
11378
-
Arg
ACG
[ENA]
¢þ
>WENV180493156
OBZY01000513
[OBZY] human gut metagenome; faeces
11349
11275
-
Arg
ACG
[ENA]
¢þ
>WENV180493538
OBZZ01000060
[OBZZ] human gut metagenome; faeces
22302
22376
+
Arg
ACG
[ENA]
¢þ
>WENV180497773
OCAF01000017
[OCAF] human gut metagenome; faeces
24731
24805
+
Arg
ACG
[ENA]
¢þ
>WENV180499179
OCAH01000173
[OCAH] human gut metagenome; faeces
15853
15927
+
Arg
ACG
[ENA]
¢þ
>WENV180505030
OCAO01000728
[OCAO] human gut metagenome; faeces
6576
6650
+
Arg
ACG
[ENA]
¢þ
>WENV180542586
OCHS01258867
[OCHS] human gut metagenome; human gut
157
83
-
Arg
ACG
[ENA]
¢þ
>WENV180606861
OCPU01000021
[OCPU] human gut metagenome; human gut
29038
29112
+
Arg
ACG
[ENA]
¢þ
>WENV180634096
OCRA01193423
[OCRA] human gut metagenome; human gut
132
58
-
Arg
ACG
[ENA]
¢þ
>W08010146
ABQP01000015
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [ABQP]
1534
1458
-
Arg
ACG
[ENA]
¡û
>WENV181187101
OENY01000030
[OENY] human gut metagenome; human gut
63676
63750
+
Arg
ACG
[ENA]
¢þ
>WENV181187102
OENY01000030
[OENY] human gut metagenome; human gut
63779
63853
+
Arg
ACG
[ENA]
¢þ
>WENV181187103
OENY01000030
[OENY] human gut metagenome; human gut
63882
63956
+
Arg
ACG
[ENA]
¢þ
>WENV181217811
OFCL01000101
[OFCL] metagenome; Human gut stool
1591
1517
-
Arg
ACG
[ENA]
¢þ
>WENV181336873
OFME01000101
[OFME] human gut metagenome; human gut
47356
47282
-
Arg
ACG
[ENA]
¢þ
>WENV181345801
OFML01000923
[OFML] human gut metagenome; human gut
17514
17588
+
Arg
ACG
[ENA]
¢þ
>W141144025
AWSX01000075
Actinomycetota
Bifidobacterium breve JCP7499 [AWSX]
11886
11812
-
Arg
ACG
[ENA]
¡û
>W141144026
AWSX01000075
Actinomycetota
Bifidobacterium breve JCP7499 [AWSX]
11783
11707
-
Arg
ACG
[ENA]
¡û
>WENV181561572
OGJD01015062
[OGJD] metagenome; Human gut stool
489
563
+
Arg
ACG
[ENA]
¢þ
>WENV181785722
OGRN01000055
[OGRN] human gut metagenome; faeces
75477
75403
-
Arg
ACG
[ENA]
¢þ
>WENV181789697
OGRO01033375
[OGRO] human gut metagenome; faeces
111
185
+
Arg
ACG
[ENA]
¢þ
>WENV181793738
OGRR01010477
[OGRR] human gut metagenome; faeces
1590
1516
-
Arg
ACG
[ENA]
¢þ
>WENV181935100
OGYU01000917
[OGYU] human gut metagenome; faeces
9754
9828
+
Arg
ACG
[ENA]
¢þ
>WENV182000386
OHAX01026699
[OHAX] human gut metagenome; faeces
38
112
+
Arg
ACG
[ENA]
¢þ
>WENV182162518
OHMH01001414
[OHMH] human gut metagenome; feces
3493
3567
+
Arg
ACG
[ENA]
¢þ
>WENV182180136
OHNN01053084
[OHNN] human gut metagenome; feces
91
165
+
Arg
ACG
[ENA]
¢þ
>WENV182317722
OHYE01051447
[OHYE] human gut metagenome; feces
375
301
-
Arg
ACG
[ENA]
¢þ
>WENV182354119
OIBN01000384
[OIBN] human gut metagenome; feces
10751
10825
+
Arg
ACG
[ENA]
¢þ
>WENV182394650
OIEJ01000145
[OIEJ] human gut metagenome; human gut
124
198
+
Arg
ACG
[ENA]
¢þ
>WENV182400362
OIEQ01000073
[OIEQ] human gut metagenome; human gut
97055
96981
-
Arg
ACG
[ENA]
¢þ
>WENV182401684
OIER01006418
[OIER] human gut metagenome; human gut
562
636
+
Arg
ACG
[ENA]
¢þ
>WENV182403604
OIEU01000021
[OIEU] human gut metagenome; human gut
94156
94082
-
Arg
ACG
[ENA]
¢þ
>WENV182598580
OJJD01007440
[OJJD] metagenome; faeces
1549
1475
-
Arg
ACG
[ENA]
¢þ
>WENV182628694
OJKQ01027758
[OJKQ] metagenome; faeces
855
781
-
Arg
ACG
[ENA]
¢þ
>WENV182705604
OJOV01002415
[OJOV] human gut metagenome; stool sample
2031
2105
+
Arg
ACG
[ENA]
¢þ
>WENV182743327
OJQQ01000116
[OJQQ] human gut metagenome; stool sample
14222
14148
-
Arg
ACG
[ENA]
¢þ
>WENV182758412
OJRI01002097
[OJRI] human gut metagenome; stool sample
2031
2105
+
Arg
ACG
[ENA]
¢þ
>WENV182775100
OJSA01005400
[OJSA] human gut metagenome; human gut
870
944
+
Arg
ACG
[ENA]
¢þ
>WENV182781346
OJSE01003445
[OJSE] human gut metagenome; human gut
1810
1884
+
Arg
ACG
[ENA]
¢þ
>WENV182805091
OJVC01000030
[OJVC] human gut metagenome; human gut
3052
3126
+
Arg
ACG
[ENA]
¢þ
>WENV182807944
OJWA01000407
[OJWA] human gut metagenome; human gut
290
216
-
Arg
ACG
[ENA]
¢þ
>WENV182807945
OJWA01000407
[OJWA] human gut metagenome; human gut
187
113
-
Arg
ACG
[ENA]
¢þ
>WENV182815764
OJYU01000010
[OJYU] human gut metagenome; human gut
25270
25344
+
Arg
ACG
[ENA]
¢þ
>WENV182835718
OKFP01001613
[OKFP] human gut metagenome; human gut
711
785
+
Arg
ACG
[ENA]
¢þ
>WENV182853684
OKMM01000759
[OKMM] human gut metagenome; human gut
1666
1740
+
Arg
ACG
[ENA]
¢þ
>WENV182891325
OKSH01000753
[OKSH] human gut metagenome; faeces
20843
20917
+
Arg
ACG
[ENA]
¢þ
>WENV182941960
OKVG01018159
[OKVG] human gut metagenome; human gut
384
458
+
Arg
ACG
[ENA]
¢þ
>WENV182943549
OKVI01000181
[OKVI] human gut metagenome; human gut
30848
30774
-
Arg
ACG
[ENA]
¢þ
>WENV182947875
OKVN01000205
[OKVN] human gut metagenome; human gut
9849
9923
+
Arg
ACG
[ENA]
¢þ
>WENV182950831
OKVT01000055
[OKVT] human gut metagenome; human gut
47383
47309
-
Arg
ACG
[ENA]
¢þ
>WENV182954085
OKWA01000021
[OKWA] human gut metagenome; human gut
29583
29657
+
Arg
ACG
[ENA]
¢þ
>WENV183016969
OLET01020292
[OLET] human gut metagenome; human gut
196
122
-
Arg
ACG
[ENA]
¢þ
>WENV183096477
OLNE01000025
[OLNE] human gut metagenome; faeces
46986
46912
-
Arg
ACG
[ENA]
¢þ
>WENV183100464
OLNG01000033
[OLNG] human gut metagenome; faeces
88902
88976
+
Arg
ACG
[ENA]
¢þ
>WENV183100465
OLNG01000033
[OLNG] human gut metagenome; faeces
89025
89099
+
Arg
ACG
[ENA]
¢þ
>WENV183100814
OLNG01000466
[OLNG] human gut metagenome; faeces
14458
14384
-
Arg
ACG
[ENA]
¢þ
>WENV183100815
OLNG01000466
[OLNG] human gut metagenome; faeces
14355
14281
-
Arg
ACG
[ENA]
¢þ
>WENV183119355
OLNT01006796
[OLNT] human gut metagenome; faeces
1872
1946
+
Arg
ACG
[ENA]
¢þ
>WENV183133522
OLOC01000122
[OLOC] human gut metagenome; faeces
35737
35811
+
Arg
ACG
[ENA]
¢þ
>WENV183171665
OLPC01000632
[OLPC] human gut metagenome; faeces
21558
21632
+
Arg
ACG
[ENA]
¢þ
>WENV183171666
OLPC01000632
[OLPC] human gut metagenome; faeces
21661
21735
+
Arg
ACG
[ENA]
¢þ
>WENV183182585
OLPK01000533
[OLPK] human gut metagenome; faeces
17779
17853
+
Arg
ACG
[ENA]
¢þ
>WENV183188077
OLPP01000081
[OLPP] human gut metagenome; faeces
20209
20283
+
Arg
ACG
[ENA]
¢þ
>WENV183215018
OLQG01000038
[OLQG] human gut metagenome; faeces
98043
97969
-
Arg
ACG
[ENA]
¢þ
>WENV183217390
OLQI01000242
[OLQI] human gut metagenome; faeces
10185
10259
+
Arg
ACG
[ENA]
¢þ
>WENV183220507
OLQL01000154
[OLQL] human gut metagenome; faeces
15691
15617
-
Arg
ACG
[ENA]
¢þ
>WENV183220508
OLQL01000154
[OLQL] human gut metagenome; faeces
15588
15514
-
Arg
ACG
[ENA]
¢þ
>WENV183237562
OLQY01000674
[OLQY] human gut metagenome; faeces
12198
12124
-
Arg
ACG
[ENA]
¢þ
>WENV183237563
OLQY01000674
[OLQY] human gut metagenome; faeces
12095
12021
-
Arg
ACG
[ENA]
¢þ
>WENV183244478
OLRE01000058
[OLRE] human gut metagenome; faeces
113821
113747
-
Arg
ACG
[ENA]
¢þ
>WENV183293736
OLSK01001622
[OLSK] human gut metagenome; faeces
6157
6083
-
Arg
ACG
[ENA]
¢þ
>WENV183297734
OLSM01008445
[OLSM] human gut metagenome; faeces
2276
2350
+
Arg
ACG
[ENA]
¢þ
>WENV183347721
OLWT01031410
[OLWT] human gut metagenome; feces
890
816
-
Arg
ACG
[ENA]
¢þ
>WENV183347722
OLWT01031410
[OLWT] human gut metagenome; feces
787
713
-
Arg
ACG
[ENA]
¢þ
>WENV183478448
OMFD01003298
[OMFD] human gut metagenome; feces
3774
3700
-
Arg
ACG
[ENA]
¢þ
>WENV183567124
OOCB01000187
[OOCB] human gut metagenome; human gut
19212
19286
+
Arg
ACG
[ENA]
¢þ
>WENV183750905
PPYE01000741
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
6776
6850
+
Arg
ACG
[ENA]
¢þ
>WENV183762922
PPYE01290982
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
377
451
+
Arg
ACG
[ENA]
¢þ
>WENV183781707
PPYF01202462
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1684
1610
-
Arg
ACG
[ENA]
¢þ
>WENV183782497
PPYF01219075
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1811
1737
-
Arg
ACG
[ENA]
¢þ
>WENV183790447
PPYF01411379
[PPYF] human gut metagenome; stool from patient with Crohn's disease
9722
9796
+
Arg
ACG
[ENA]
¢þ
>WENV170540230
CWGX01000016
[CWGX] human gut metagenome; ENVO:feces
100491
100415
-
Arg
ACG
[ENA]
¢þ
>C181033263
CP018757
Actinomycetota
Bifidobacterium bifidum PRI 1 [CP018757]
2154011
2154085
+
Arg
ACG
-
¡û
>C181071739
CP022723
Actinomycetota
Bifidobacterium bifidum S6 [CP022723]
1042363
1042437
+
Arg
ACG
-
¡û
>C193003461
LR134344
Actinomycetota
Bifidobacterium bifidum NCTC13001 [LR134344]
1245890
1245964
+
Arg
ACG
-
¡û
>C191001002
AP018132
Actinomycetota
Bifidobacterium bifidum TMC 3115 [AP018132]
606757
606683
-
Arg
ACG
-
¡û
>W141523983
JGYS01000015
Actinomycetota
Bifidobacterium callitrichos DSM 23973 [JGYS]
104466
104540
+
Arg
ACG
[ENA]
¡û
>W141523984
JGYS01000015
Actinomycetota
Bifidobacterium callitrichos DSM 23973 [JGYS]
104575
104649
+
Arg
ACG
[ENA]
¡û
>W141524858
JGZK01000003
Actinomycetota
Bifidobacterium reuteri DSM 23975 [JGZK]
287921
287847
-
Arg
ACG
[ENA]
¡û
>W141524859
JGZK01000003
Actinomycetota
Bifidobacterium reuteri DSM 23975 [JGZK]
287818
287742
-
Arg
ACG
[ENA]
¡û
>W143002952
AWSW01000013
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AWSW]
46423
46347
-
Arg
ACG
[ENA]
¡û
>W143013927
JGYO01000002
Actinomycetota
Bifidobacterium bifidum [JGYO]
1489895
1489819
-
Arg
ACG
[ENA]
¡û
>W1930020842
NDXI01000002
Actinomycetota
Bifidobacterium bifidum 1 G1971 [NDXI]
182579
182505
-
Arg
ACG
[ENA]
¡û
>C09102409
CP001095
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM [CP001095]
1867609
1867535
-
Arg
ACG
-
¡û
>C09102410
CP001095
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM [CP001095]
1867506
1867432
-
Arg
ACG
-
¡û
>W1910829192
MWWW01000027
Actinomycetota
Bifidobacterium myosotis DSM 100196 [MWWW]
31542
31616
+
Arg
ACG
[ENA]
¡û
>W1911078303
NMWT01000028
Actinomycetota
Bifidobacterium parmae 77 [NMWT]
23519
23595
+
Arg
ACG
[ENA]
¡û
>W1911410679
NWTW01000001
Actinomycetota
Bifidobacterium callitrichos UMA51804 [NWTW]
57229
57303
+
Arg
ACG
[ENA]
¡û
>W1911410739
NWTX01000002
Actinomycetota
Bifidobacterium callitrichos UMA51805 [NWTX]
52230
52156
-
Arg
ACG
[ENA]
¡û
>W1911410740
NWTX01000002
Actinomycetota
Bifidobacterium callitrichos UMA51805 [NWTX]
52121
52047
-
Arg
ACG
[ENA]
¡û
>W1911410741
NWTX01000002
Actinomycetota
Bifidobacterium callitrichos UMA51805 [NWTX]
52012
51938
-
Arg
ACG
[ENA]
¡û
>W1810541418
QDIH01000002
Actinomycetota
Bifidobacterium bifidum DS33_23 [QDIH]
24994
25068
+
Arg
ACG
[ENA]
¡û
>W1810541466
QDII01000003
Actinomycetota
Bifidobacterium bifidum DS31_23 [QDII]
24756
24830
+
Arg
ACG
[ENA]
¡û
>W1810541553
QDIJ01000010
Actinomycetota
Bifidobacterium bifidum DS30_23 [QDIJ]
24892
24966
+
Arg
ACG
[ENA]
¡û
>W1810541661
QDIM01000015
Actinomycetota
Bifidobacterium bifidum DS26_23 [QDIM]
60185
60111
-
Arg
ACG
[ENA]
¡û
>W1810542220
QDIX01000021
Actinomycetota
Bifidobacterium bifidum DS32_23 [QDIX]
1608
1534
-
Arg
ACG
[ENA]
¡û
>W1810542360
QDJA01000010
Actinomycetota
Bifidobacterium bifidum DS25_23 [QDJA]
81569
81495
-
Arg
ACG
[ENA]
¡û
>W1810792884
QRJI01000002
Actinomycetota
Bifidobacterium bifidum AM18-29 [QRJI]
326094
326020
-
Arg
ACG
[ENA]
¡û
>W1810793103
QRJM01000003
Actinomycetota
Bifidobacterium bifidum AM18-12AC [QRJM]
326267
326193
-
Arg
ACG
[ENA]
¡û
>W1810793149
QRJN01000003
Actinomycetota
Bifidobacterium bifidum AM18-11 [QRJN]
24419
24493
+
Arg
ACG
[ENA]
¡û
>W1810793251
QRJP01000003
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
24419
24493
+
Arg
ACG
[ENA]
¡û
>W1810793252
QRJP01000003
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
24665
24739
+
Arg
ACG
[ENA]
¡û
>W1810795956
QRLK01000007
Actinomycetota
Bifidobacterium bifidum AM12-9 [QRLK]
88003
87929
-
Arg
ACG
[ENA]
¡û
>W1810796315
QRLR01000001
Actinomycetota
Bifidobacterium bifidum AM12-10 [QRLR]
669308
669234
-
Arg
ACG
[ENA]
¡û
>W1810798788
QRNM01000006
Actinomycetota
Bifidobacterium bifidum AF45-10 [QRNM]
47328
47254
-
Arg
ACG
[ENA]
¡û
>W1810814815
QSAO01000003
Actinomycetota
Bifidobacterium bifidum AF11-25B [QSAO]
24032
24106
+
Arg
ACG
[ENA]
¡û
>W1810822352
QSGB01000006
Actinomycetota
Bifidobacterium bifidum AM42-15AC [QSGB]
24387
24461
+
Arg
ACG
[ENA]
¡û
>W1810824930
QSHW01000003
Actinomycetota
Bifidobacterium bifidum AM36-1AC [QSHW]
157440
157514
+
Arg
ACG
[ENA]
¡û
>W1810832038
QSOS01000003
Actinomycetota
Bifidobacterium bifidum TM07-4AC [QSOS]
66183
66257
+
Arg
ACG
[ENA]
¡û
>W1810832457
QSPA01000010
Actinomycetota
Bifidobacterium bifidum TM06-5 [QSPA]
25114
25188
+
Arg
ACG
[ENA]
¡û
>W1810832856
QSPI01000010
Actinomycetota
Bifidobacterium bifidum TM06-10 [QSPI]
24385
24459
+
Arg
ACG
[ENA]
¡û
>W1810833300
QSPQ01000008
Actinomycetota
Bifidobacterium bifidum TM05-15 [QSPQ]
23762
23688
-
Arg
ACG
[ENA]
¡û
>W1810833838
QSQB01000001
Actinomycetota
Bifidobacterium bifidum TM04-12 [QSQB]
24460
24534
+
Arg
ACG
[ENA]
¡û
>W1810833839
QSQB01000001
Actinomycetota
Bifidobacterium bifidum TM04-12 [QSQB]
24583
24657
+
Arg
ACG
[ENA]
¡û
>W1810834024
QSQE01000003
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
151755
151829
+
Arg
ACG
[ENA]
¡û
>W1810834025
QSQE01000003
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
151878
151952
+
Arg
ACG
[ENA]
¡û
>W1810834026
QSQE01000003
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
152001
152075
+
Arg
ACG
[ENA]
¡û
>W1810834072
QSQF01000002
Actinomycetota
Bifidobacterium bifidum TM02-15 [QSQF]
156963
157037
+
Arg
ACG
[ENA]
¡û
>W1810836221
QSRS01000007
Actinomycetota
Bifidobacterium bifidum TF07-22 [QSRS]
3192
3266
+
Arg
ACG
[ENA]
¡û
>W1810836907
QSSD01000004
Actinomycetota
Bifidobacterium bifidum TF06-14AC [QSSD]
161693
161767
+
Arg
ACG
[ENA]
¡û
>W1810836945
QSSE01000002
Actinomycetota
Bifidobacterium bifidum TF06-13 [QSSE]
161859
161933
+
Arg
ACG
[ENA]
¡û
>W1810837194
QSSI01000007
Actinomycetota
Bifidobacterium bifidum TF05-39 [QSSI]
3192
3266
+
Arg
ACG
[ENA]
¡û
>W1810837742
QSSS01000009
Actinomycetota
Bifidobacterium bifidum TF05-1 [QSSS]
87471
87397
-
Arg
ACG
[ENA]
¡û
>C153000008
AP012323
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AP012323]
1427608
1427532
-
Arg
ACG
[Ensembl]
¡û
>C151068336
CP010412
Actinomycetota
Bifidobacterium bifidum BF3 [CP010412]
1443621
1443545
-
Arg
ACG
-
¡û
>C11102314
CP001840
Actinomycetota
Bifidobacterium bifidum PRL2010 [CP001840]
1433709
1433633
-
Arg
ACG
[Ensembl]
¡û
>C11102361
CP002220
Actinomycetota
Bifidobacterium bifidum S17 [CP002220]
1401757
1401681
-
Arg
ACG
[Ensembl]
¡û
>C11103314
CP002794
Actinomycetota
Bifidobacterium longum subsp. longum KACC 91563 [CP002794]
1395056
1394982
-
Arg
ACG
[Ensembl]
¡û
>C11103315
CP002794
Actinomycetota
Bifidobacterium longum subsp. longum KACC 91563 [CP002794]
1394953
1394879
-
Arg
ACG
[Ensembl]
¡û
>W1511364998
JSDS01000007
Actinomycetota
Bifidobacterium bifidum 156B [JSDS]
496510
496434
-
Arg
ACG
[ENA]
¡û
>W1511365037
JSDT01000002
Actinomycetota
Bifidobacterium bifidum 324B [JSDT]
1490479
1490403
-
Arg
ACG
[ENA]
¡û
>W1511365107
JSDU01000008
Actinomycetota
Bifidobacterium bifidum 85B [JSDU]
81543
81467
-
Arg
ACG
[ENA]
¡û
>W1511365144
JSDV01000006
Actinomycetota
Bifidobacterium bifidum A8 [JSDV]
411488
411412
-
Arg
ACG
[ENA]
¡û
>W1511365196
JSDW01000016
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [JSDW]
323818
323742
-
Arg
ACG
[ENA]
¡û
>W1511365252
JSDX01000020
Actinomycetota
Bifidobacterium bifidum IPLA 20017 [JSDX]
151108
151032
-
Arg
ACG
[ENA]
¡û
>W1511365293
JSDY01000006
Actinomycetota
Bifidobacterium bifidum LMG 11582 [JSDY]
335410
335334
-
Arg
ACG
[ENA]
¡û
>W1511365349
JSDZ01000014
Actinomycetota
Bifidobacterium bifidum LMG 11583 [JSDZ]
157391
157315
-
Arg
ACG
[ENA]
¡û
>W1511365395
JSEA01000026
Actinomycetota
Bifidobacterium bifidum LMG 13195 [JSEA]
138599
138523
-
Arg
ACG
[ENA]
¡û
>W1511365445
JSEB01000012
Actinomycetota
Bifidobacterium bifidum LMG 13200 [JSEB]
66110
66034
-
Arg
ACG
[ENA]
¡û
>C121001442
CP001361
Actinomycetota
Bifidobacterium bifidum BGN4 [CP001361]
1374920
1374844
-
Arg
ACG
[Ensembl]
¡û
>W1610027601
AVQE01000004
Actinomycetota
Bifidobacterium breve MCC 1604 [AVQE]
33685
33611
-
Arg
ACG
[ENA]
¡û
>W1610027602
AVQE01000004
Actinomycetota
Bifidobacterium breve MCC 1604 [AVQE]
33582
33506
-
Arg
ACG
[ENA]
¡û
>W1610028146
AWFT01000002
Actinomycetota
Bifidobacterium breve MCC 1340 [AWFT]
40853
40927
+
Arg
ACG
[ENA]
¡û
>W1610028147
AWFT01000002
Actinomycetota
Bifidobacterium breve MCC 1340 [AWFT]
40956
41032
+
Arg
ACG
[ENA]
¡û
>W1610045717
BBBT01000120
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
2261
2337
+
Arg
ACG
[ENA]
¡û
>W1610060651
BCFK01000004
Actinomycetota
Bifidobacterium aesculapii [BCFK]
56201
56275
+
Arg
ACG
[ENA]
¡û
>W1610060653
BCFK01000004
Actinomycetota
Bifidobacterium aesculapii [BCFK]
56429
56503
+
Arg
ACG
[ENA]
¡û
>W1610074687
BCXK01000009
Actinomycetota
Bifidobacterium bifidum [BCXK]
87700
87624
-
Arg
ACG
[ENA]
¡û
>W1610074688
BCXK01000009
Actinomycetota
Bifidobacterium bifidum [BCXK]
87577
87501
-
Arg
ACG
[ENA]
¡û
>W1610098216
CYXQ01000009
Actinomycetota
Bifidobacterium bifidum [CYXQ]
83295
83219
-
Arg
ACG
[ENA]
¡û
>W121077181
AKCA01000001
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [AKCA]
1213723
1213647
-
Arg
ACG
[ENA]
¡û
>W1610518880
JDTT01000008
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM DSM 20088 [JDTT]
69858
69932
+
Arg
ACG
[ENA]
¡û
>W1610518881
JDTT01000008
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM DSM 20088 [JDTT]
69961
70035
+
Arg
ACG
[ENA]
¡û
>W1610519991
JDUR01000006
Actinomycetota
Bifidobacterium actinocoloniiforme DSM 22766 [JDUR]
123262
123338
+
Arg
ACG
[ENA]
¡û
>W1610520215
JDUW01000001
Actinomycetota
Bifidobacterium reuteri DSM 23975 [JDUW]
288479
288405
-
Arg
ACG
[ENA]
¡û
>W1610520216
JDUW01000001
Actinomycetota
Bifidobacterium reuteri DSM 23975 [JDUW]
288376
288300
-
Arg
ACG
[ENA]
¡û
>W1610686236
LKUR01000001
Actinomycetota
Bifidobacterium bifidum [LKUR]
152782
152858
+
Arg
ACG
[ENA]
¡û
>W1610889445
LRPO01000024
Actinomycetota
Bifidobacterium bifidum [LRPO]
1498
1422
-
Arg
ACG
[ENA]
¡û
>W1610921338
LSUI01000022
Actinomycetota
Bifidobacterium bifidum [LSUI]
1532
1456
-
Arg
ACG
[ENA]
¡û
>W1610921430
LSUL01000003
Actinomycetota
Bifidobacterium bifidum [LSUL]
46904
46828
-
Arg
ACG
[ENA]
¡û
>W1630009221
JDUM01000008
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [JDUM]
1607
1531
-
Arg
ACG
[ENA]
¡û
>W1710023835
AVQE01000004
Actinomycetota
Bifidobacterium breve MCC 1604 [AVQE]
33685
33611
-
Arg
ACG
[ENA]
¡û
>W1710023836
AVQE01000004
Actinomycetota
Bifidobacterium breve MCC 1604 [AVQE]
33582
33506
-
Arg
ACG
[ENA]
¡û
>W1710024158
AWFT01000002
Actinomycetota
Bifidobacterium breve MCC 1340 [AWFT]
40853
40927
+
Arg
ACG
[ENA]
¡û
>W1710024159
AWFT01000002
Actinomycetota
Bifidobacterium breve MCC 1340 [AWFT]
40956
41032
+
Arg
ACG
[ENA]
¡û
>W1710042558
BBBT01000120
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
2261
2337
+
Arg
ACG
[ENA]
¡û
>W1710057906
BCFK01000004
Actinomycetota
Bifidobacterium aesculapii [BCFK]
56201
56275
+
Arg
ACG
[ENA]
¡û
>W1710057908
BCFK01000004
Actinomycetota
Bifidobacterium aesculapii [BCFK]
56429
56503
+
Arg
ACG
[ENA]
¡û
>W1710072502
BCXK01000009
Actinomycetota
Bifidobacterium bifidum [BCXK]
87700
87624
-
Arg
ACG
[ENA]
¡û
>W1710072503
BCXK01000009
Actinomycetota
Bifidobacterium bifidum [BCXK]
87577
87501
-
Arg
ACG
[ENA]
¡û
>W1710100971
CYXQ01000009
Actinomycetota
Bifidobacterium bifidum [CYXQ]
83295
83219
-
Arg
ACG
[ENA]
¡û
>W1710558379
FOLU01000005
Actinomycetota
Bifidobacterium bifidum [FOLU]
152236
152312
+
Arg
ACG
[ENA]
¡û
>W1710615404
JDUR01000006
Actinomycetota
Bifidobacterium actinocoloniiforme DSM 22766 [JDUR]
123262
123338
+
Arg
ACG
[ENA]
¡û
>W1710615628
JDUW01000001
Actinomycetota
Bifidobacterium reuteri DSM 23975 [JDUW]
288479
288405
-
Arg
ACG
[ENA]
¡û
>W1710615629
JDUW01000001
Actinomycetota
Bifidobacterium reuteri DSM 23975 [JDUW]
288376
288300
-
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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