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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.147345 (70 seq.)
>W1710809600
LKEQ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
99196
99271
+
Arg
CCG
[ENA]
¡û
>W131052824
AMZJ01000064
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
33634
33709
+
Arg
CCG
[ENA]
¡û
>W1711055061
LRUH01000044
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
31034
31109
+
Arg
CCG
[ENA]
¡û
>W1711088442
LSYX01000083
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
28951
29025
+
Arg
CCG
[ENA]
¡û
>W1711088461
LSYY01000014
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
1912
1837
-
Arg
CCG
[ENA]
¡û
>W1711258816
LYUV01000013
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
6019
5945
-
Arg
CCG
[ENA]
¡û
>W1711258848
LYUW01000010
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
6182
6108
-
Arg
CCG
[ENA]
¡û
>W1711258893
LYUX01000032
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
5403
5477
+
Arg
CCG
[ENA]
¡û
>W1711258912
LYUY01000006
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
8506
8432
-
Arg
CCG
[ENA]
¡û
>W131242642
CAOH01000082
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
33093
33168
+
Arg
CCG
[ENA]
¡û
>W1711745705
MUJL01000061
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
5864
5938
+
Arg
CCG
[ENA]
¡û
>W1711745731
MUJM01000038
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
5315
5241
-
Arg
CCG
[ENA]
¡û
>W1712108446
NJBR01000103
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
2682
2607
-
Arg
CCG
[ENA]
¡û
>W131243108
CAOU02000022
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
29202
29276
+
Arg
CCG
[ENA]
¡û
>C026828
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
747473
747546
+
Arg
CCG
[Ensembl]
¡û
>C026885
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
283436
283363
-
Arg
CCG
[Ensembl]
¡û
>w016803
AAQP01000115
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
881
803
-
Arg
CCG
[ENA]
¡û
>W141001027
ADHD01000269
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
475
400
-
Arg
CCG
[ENA]
¡û
>w005416
AAGC01000002
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans [AAGC]
2763
2841
+
Arg
CCG
[ENA]
¡û
>W141065630
AQQE01000048
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
5263
5337
+
Arg
CCG
[ENA]
¡û
>WENV181405267
OGCC01020224
[OGCC] insect metagenome; haemolymph
385
311
-
Arg
CCG
[ENA]
¢þ
>WENV181405288
OGCD01000041
[OGCD] insect metagenome; haemolymph
8081
8155
+
Arg
CCG
[ENA]
¢þ
>WENV181406103
OGCF01000502
[OGCF] insect metagenome; haemolymph
232
306
+
Arg
CCG
[ENA]
¢þ
>WENV181406104
OGCF01000502
[OGCF] insect metagenome; haemolymph
2698
2624
-
Arg
CCG
[ENA]
¢þ
>W141240226
CAGB01000121
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
4035
4110
+
Arg
CCG
[ENA]
¡û
>C08011402
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
894242
894317
+
Arg
CCG
[Ensembl]
¡û
>C181017579
CP015510
Alphaproteobacteria
Wolbachia endosymbiont of Folsomia candida Berlin [CP015510]
27766
27692
-
Arg
CCG
-
¡û
>C191074317
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
38385
38460
+
Arg
CCG
-
¡û
>C191123112
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
696036
695961
-
Arg
CCG
-
¡û
>C191123145
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
1247032
1247107
+
Arg
CCG
-
¡û
>C191123179
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
1247035
1247110
+
Arg
CCG
-
¡û
>C191188727
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
933154
933080
-
Arg
CCG
-
¡û
>W09113840
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
118128
118203
+
Arg
CCG
[ENA]
¡û
>W09121808
ACFP01000138
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
189
263
+
Arg
CCG
[ENA]
¡û
>W141812277
JQAM01000024
Alphaproteobacteria
Wolbachia pipientis [JQAM]
16147
16221
+
Arg
CCG
[ENA]
¡û
>C09111258
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
664416
664490
+
Arg
CCG
[Ensembl]
¡û
>W1910213452
FMKF01000002
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
23375
23300
-
Arg
CCG
[ENA]
¡û
>W1910753950
MKIF01000017
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
2828
2902
+
Arg
CCG
[ENA]
¡û
>W1910759033
MLZJ01000114
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
5161
5087
-
Arg
CCG
[ENA]
¡û
>W1910760279
MNCG01000115
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
5161
5087
-
Arg
CCG
[ENA]
¡û
>W1910794372
MRWX01000050
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
1606
1531
-
Arg
CCG
[ENA]
¡û
>W1910802356
MSYL01000154
Alphaproteobacteria
Wolbachia sp. wRi_2 [MSYL]
1738
1812
+
Arg
CCG
[ENA]
¡û
>W1911239476
NSDR01000120
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
15224
15150
-
Arg
CCG
[ENA]
¡û
>W1911239491
NSDS01000044
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
2794
2868
+
Arg
CCG
[ENA]
¡û
>W1911239517
NSDT01000024
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
15083
15009
-
Arg
CCG
[ENA]
¡û
>W1911281108
NTHL01000054
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
20431
20505
+
Arg
CCG
[ENA]
¡û
>W1911412145
NWVH01000026
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
2393
2318
-
Arg
CCG
[ENA]
¡û
>W1911412174
NWVI01000003
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
6628
6703
+
Arg
CCG
[ENA]
¡û
>W1911412209
NWVI01000160
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
6758
6832
+
Arg
CCG
[ENA]
¡û
>W1911412215
NWVJ01000002
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
2796
2870
+
Arg
CCG
[ENA]
¡û
>W1911412276
NWVK01000036
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
3265
3339
+
Arg
CCG
[ENA]
¡û
>W1911545126
OUNE01000174
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
7183
7258
+
Arg
CCG
[ENA]
¡û
>W1810758330
QPIP01000005
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
19285
19360
+
Arg
CCG
[ENA]
¡û
>C151001139
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
1046468
1046393
-
Arg
CCG
[Ensembl]
¡û
>C151102206
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
746806
746880
+
Arg
CCG
[Ensembl]
¡û
>W1510562607
CTEH01000002
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
392056
392131
+
Arg
CCG
[ENA]
¡û
>W1511183979
JMCJ01000943
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
373
448
+
Arg
CCG
[ENA]
¡û
>W1511536226
JYPC01000079
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
1529
1454
-
Arg
CCG
[ENA]
¡û
>W11145944
AERW01000202
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
5412
5487
+
Arg
CCG
[ENA]
¡û
>W11185739
CACK01000110
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
25717
25642
-
Arg
CCG
[ENA]
¡û
>C131009112
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
554666
554741
+
Arg
CCG
[Ensembl]
¡û
>C131009144
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
780999
781073
+
Arg
CCG
[Ensembl]
¡û
>W1610673706
LKEQ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
99196
99271
+
Arg
CCG
[ENA]
¡û
>W1610896107
LRUH01000044
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
31034
31109
+
Arg
CCG
[ENA]
¡û
>W1610922981
LSYX01000083
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
28951
29025
+
Arg
CCG
[ENA]
¡û
>W1610923000
LSYY01000014
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
1912
1837
-
Arg
CCG
[ENA]
¡û
>W1611021081
LYUV01000013
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
6019
5945
-
Arg
CCG
[ENA]
¡û
>W1611021113
LYUW01000010
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
6182
6108
-
Arg
CCG
[ENA]
¡û
>W1611021158
LYUX01000032
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
5403
5477
+
Arg
CCG
[ENA]
¡û
>W1611021177
LYUY01000006
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
8506
8432
-
Arg
CCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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