This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.148274 (22 seq.)
>W131005345
AHES01000002
Bacillota
Bacillus cereus VD021 [AHES]
136119
136194
+
Met
CAT
[ENA]
¡û
>W131174924
ARIV01000018
Bacillota
Salsuginibacillus kocurii DSM 18087 [ARIV]
89812
89888
+
Met
CAT
[ENA]
¡û
>W1711215886
LXLU01000065
Bacillota
Bacillus mycoides weihenstephanensis [LXLU]
51943
51868
-
Met
CAT
[ENA]
¡û
>W1711216218
LXLX01000049
Bacillota
Bacillus mycoides weihenstephanensis [LXLX]
225774
225699
-
Met
CAT
[ENA]
¡û
>W131223803
AUCI01000003
Bacillota
Salibacterium aidingense DSM 18341 [AUCI]
130480
130404
-
Met
CAT
[ENA]
¡û
>W1711680812
MRWS01000029
Bacillota
Bacillus mycoides [MRWS]
17929
18004
+
Met
CAT
[ENA]
¡û
>W1711736574
MUAG01000001
Bacillota
Bacillus cereus [MUAG]
308920
308995
+
Met
CAT
[ENA]
¡û
>W1712028494
NFDI01000054
Bacillota
Bacillus mycoides serovar asturiensis [NFDI]
559766
559691
-
Met
CAT
[ENA]
¡û
>W141072824
ASPY01000109
Bacillota
Bacillus mycoides FSL H7-687 [ASPY]
558908
558833
-
Met
CAT
[ENA]
¡û
>W141234925
BAXA01000001
Bacillota
Geomicrobium sp. JCM 19038 [BAXA]
152362
152438
+
Met
CAT
[ENA]
¡û
>C181094875
CP024107
Bacillota
Bacillus cytotoxicus CH_15 [CP024107]
3194352
3194277
-
Met
CAT
-
¡û
>W1910755861
MKZP01000001
Bacillota
Bacillus mycoides GM5LP [MKZP]
136608
136683
+
Met
CAT
[ENA]
¡û
>W1910756020
MKZQ01000020
Bacillota
Bacillus mycoides GM6LP [MKZQ]
320762
320837
+
Met
CAT
[ENA]
¡û
>W1910940829
NJAW01000008
Bacillota
Salipaludibacillus neizhouensis DSM 19794 [NJAW]
1135251
1135175
-
Met
CAT
[ENA]
¡û
>W1810486791
QAYD01000001
Bacillota
Bacillus sp. OV752 [QAYD]
65014
65089
+
Met
CAT
[ENA]
¡û
>W1810861514
QTTY01000002
Bacillota
Bacillus mycoides DB-1 [QTTY]
340573
340648
+
Met
CAT
[ENA]
¡û
>W121027403
AHDP01000026
Bacillota
Bacillus cereus BAG6X1-2 [AHDP]
530419
530344
-
Met
CAT
[ENA]
¡û
>W121027499
AHDR01000034
Bacillota
Bacillus mycoides BtB2-4 [AHDR]
136483
136408
-
Met
CAT
[ENA]
¡û
>W121028616
AHEN01000033
Bacillota
Bacillus cereus MC67 [AHEN]
135733
135808
+
Met
CAT
[ENA]
¡û
>W121030017
AHFP01000014
Bacillota
Bacillus mycoides VDM022 [AHFP]
135694
135769
+
Met
CAT
[ENA]
¡û
>W1710519129
FNEN01000001
Bacillota
Natribacillus halophilus [FNEN]
307868
307792
-
Met
CAT
[ENA]
¡û
>W1710552271
FOGT01000003
Bacillota
Salipaludibacillus aurantiacus [FOGT]
28017
27941
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK