This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.148276 (15 seq.)
>CHL1810002386
GQ893027
Viridiplantae
Vigna radiata (GQ893027)
110403
110482
+
Leu
TAG
[ENA]
¡û
>CHL1810005529
JQ755301
Viridiplantae
Vigna unguiculata (JQ755301)
110379
110458
+
Leu
TAG
[ENA]
¡û
>CHL1810009711
KF225592
Viridiplantae
Osmundastrum cinnamomeum (KF225592)
115497
115576
+
Leu
TAG
[ENA]
¡û
>CHL1810009738
KF225594
Viridiplantae
Diplopterygium glaucum (KF225594)
118961
119040
+
Leu
TAG
[ENA]
¡û
>CHL1810041149
KY427329
Viridiplantae
Ampelopteris prolifera (KY427329)
110650
110729
+
Leu
TAG
[ENA]
¡û
>CHL1810041195
KY427331
Viridiplantae
Asplenium pekinense (KY427331)
110375
110454
+
Leu
TAG
[ENA]
¡û
>CHL1810041218
KY427332
Viridiplantae
Asplenium prolongatum (KY427332)
109764
109843
+
Leu
TAG
[ENA]
¡û
>CHL1810041310
KY427336
Viridiplantae
Christella appendiculata (KY427336)
110462
110541
+
Leu
TAG
[ENA]
¡û
>CHL1810041332
KY427337
Viridiplantae
Cystopteris chinensis (KY427337)
110301
110380
+
Leu
TAG
[ENA]
¡û
>CHL1810041378
KY427339
Viridiplantae
Deparia pycnosora (KY427339)
110296
110375
+
Leu
TAG
[ENA]
¡û
>CHL1810041493
KY427344
Viridiplantae
Diplazium dilatatum (KY427344)
110192
110271
+
Leu
TAG
[ENA]
¡û
>CHL1810041697
KY427353
Viridiplantae
Matteuccia struthiopteris (KY427353)
109895
109974
+
Leu
TAG
[ENA]
¡û
>CHL1810041743
KY427355
Viridiplantae
Pseudophegopteris aurita (KY427355)
109224
109303
+
Leu
TAG
[ENA]
¡û
>CHL1810041834
KY427359
Viridiplantae
Woodsia polystichoides (KY427359)
109804
109884
+
Leu
TAG
[ENA]
¡û
>CHL1810055777
MG162586
Viridiplantae
Impatiens piufanensis (MG162586)
112550
112629
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK