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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.152341 (4 seq.)
>W131010949
AHYW01000002
Bacillota
Enterococcus columbae DSM 7374 = ATCC 51263 [AHYW]
83176
83251
+
Arg
CCT
[ENA]
¡û
>W131167300
ARDE01000001
Bacillota
Enterococcus columbae DSM 7374 = ATCC 51263 [ARDE]
61357
61432
+
Arg
CCT
[ENA]
¡û
>W131201925
ASWJ01000004
Bacillota
Enterococcus columbae DSM 7374 = ATCC 51263 [ASWJ]
242293
242368
+
Arg
CCT
[ENA]
¡û
>W1910583538
JXKI01000002
Bacillota
Enterococcus columbae DSM 7374 = ATCC 51263 [JXKI]
120659
120584
-
Arg
CCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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