tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.154277 (93 seq.)
>W1710864877 LMGF01000005 Alphaproteobacteria Sphingopyxis sp. Root1497 [LMGF] 530784 530869 + Tyr GTA [ENA] ¡û
>W1710865018 LMGI01000002 Alphaproteobacteria Sphingopyxis sp. Root154 [LMGI] 298671 298586 - Tyr GTA [ENA] ¡û
>W1710867428 LMIG01000004 Alphaproteobacteria Sphingopyxis sp. Root214 [LMIG] 298637 298552 - Tyr GTA [ENA] ¡û
>W1710912500 LNRR01000001 Alphaproteobacteria Sphingopyxis sp. H005 [LNRR] 324238 324323 + Tyr GTA [ENA] ¡û
>W1710912548 LNRS01000001 Alphaproteobacteria Sphingopyxis sp. H012 [LNRS] 426496 426411 - Tyr GTA [ENA] ¡û
>W1710912594 LNRT01000001 Alphaproteobacteria Sphingopyxis sp. H038 [LNRT] 426496 426411 - Tyr GTA [ENA] ¡û
>W1710912637 LNRU01000001 Alphaproteobacteria Sphingopyxis sp. H053 [LNRU] 324322 324407 + Tyr GTA [ENA] ¡û
>W1710912680 LNRV01000003 Alphaproteobacteria Sphingopyxis sp. H077 [LNRV] 22049 22134 + Tyr GTA [ENA] ¡û
>W1710912727 LNRW01000001 Alphaproteobacteria Sphingopyxis sp. H080 [LNRW] 317730 317815 + Tyr GTA [ENA] ¡û
>W1710912772 LNRX01000001 Alphaproteobacteria Sphingopyxis sp. H085 [LNRX] 324235 324320 + Tyr GTA [ENA] ¡û
>W1710912847 LNRY01000018 Alphaproteobacteria Sphingopyxis sp. H093 [LNRY] 79931 79846 - Tyr GTA [ENA] ¡û
>W1710913049 LNSD01000003 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 493171 493086 - Tyr GTA [ENA] ¡û
>W1710913111 LNSE01000008 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 195848 195763 - Tyr GTA [ENA] ¡û
>W1710913147 LNSF01000004 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 493171 493086 - Tyr GTA [ENA] ¡û
>W1710913192 LNSG01000004 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 493172 493087 - Tyr GTA [ENA] ¡û
>W1710913238 LNSH01000007 Alphaproteobacteria Sphingopyxis sp. H081 [LNSH] 195855 195770 - Tyr GTA [ENA] ¡û
>W1710913305 LNSI01000021 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 54863 54778 - Tyr GTA [ENA] ¡û
>W1710913340 LNSJ01000018 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 86303 86218 - Tyr GTA [ENA] ¡û
>W1711082181 LSTR01000026 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 27786 27871 + Tyr GTA [ENA] ¡û
>W1711083827 LSVG01000001 Alphaproteobacteria Sphingobium yanoikuyae [LSVG] 3307 3222 - Tyr GTA [ENA] ¡û
>W1711146774 LVJD01000214 Alphaproteobacteria Sphingobium yanoikuyae [LVJD] 1279 1194 - Tyr GTA [ENA] ¡û
>W1712105776 NISJ01000006 Alphaproteobacteria Sphingopyxis witflariensis [NISJ] 228279 228364 + Tyr GTA [ENA] ¡û
>W1712105829 NISK01000003 Alphaproteobacteria Sphingopyxis bauzanensis [NISK] 731222 731307 + Tyr GTA [ENA] ¡û
>C171128408 LT598653 Alphaproteobacteria uncultured Sphingopyxis sp. [LT598653] 1251739 1251824 + Tyr GTA - ¡û
>W131002996 AGZU01000008 Alphaproteobacteria Sphingobium yanoikuyae ATCC 51230 [AGZU] 1277678 1277763 + Tyr GTA [ENA] ¡û
>W131052358 AMYX01000004 Alphaproteobacteria alpha proteobacterium LLX12A [AMYX] 124835 124920 + Tyr GTA [ENA] ¡û
>C019722 CP000356 Alphaproteobacteria Sphingopyxis alaskensis RB2256 [CP000356] 854471 854556 + Tyr GTA [Ensembl] ¡û
>WENV180040737 LLBZ010009862 [LLBZ] soil metagenome; soil from tomato rhizosphere 14617 14532 - Tyr GTA [ENA] ¢þ
>WENV181166935 OEIU01004418 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 96 181 + Tyr GTA [ENA] ¢þ
>W141231055 BATN01000131 Alphaproteobacteria Sphingobium fuliginis KK22 [BATN] 5704 5619 - Tyr GTA [ENA] ¡û
>ENV08000205 ABLY01016752 viral fraction from Arctic Ocean 92 7 - Tyr GTA [ENA] ¡û
>ENV08000226 ABLY01050397 viral fraction from Arctic Ocean 114 29 - Tyr GTA [ENA] ¡û
>WENV183732767 PJTX01011876 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 922 837 - Tyr GTA [ENA] ¢þ
>WENV183732955 PJTY01000007 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 95726 95811 + Tyr GTA [ENA] ¢þ
>WENV183734227 PJTZ01000298 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 7796 7711 - Tyr GTA [ENA] ¢þ
>WENV183736814 PJUD01000039 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 141569 141484 - Tyr GTA [ENA] ¢þ
>WENV183739616 PJUE01042489 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 357 272 - Tyr GTA [ENA] ¢þ
>WENV170596829 FUIF01014908 [FUIF] marine metagenome; marine 686 771 + Tyr GTA [ENA] ¢þ
>WENV170655590 JTFN01048948 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 140 225 + Tyr GTA [ENA] ¢þ
>WENV170708418 LNAP01079707 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 679 594 - Tyr GTA [ENA] ¢þ
>WENV170974059 MTKY01053424 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 15871 15786 - Tyr GTA [ENA] ¢þ
>W09102979 AAIP01000022 Alphaproteobacteria Sphingopyxis alaskensis RB2256 [AAIP] 2745 2660 - Tyr GTA [ENA] ¡û
>C181047595 CP020925 Alphaproteobacteria Sphingobium yanoikuyae SHJ [CP020925] 5196735 5196650 - Tyr GTA - ¡û
>C181089687 CP023741 Alphaproteobacteria Sphingobium yanoikuyae S72 [CP023741] 5498078 5498163 + Tyr GTA - ¡û
>C191000342 AP017603 Alphaproteobacteria Sphingopyxis sp. EG6 [AP017603] 1035203 1035288 + Tyr GTA - ¡û
>C191000559 AP017898 Alphaproteobacteria Sphingopyxis sp. FD7 [AP017898] 766252 766337 + Tyr GTA - ¡û
>W141520428 JGVR01000001 Alphaproteobacteria Sphingobium yanoikuyae [JGVR] 143433 143518 + Tyr GTA [ENA] ¡û
>C191063637 CP029335 Alphaproteobacteria Sphingobium sp. LF-16 [CP029335] 4535200 4535285 + Tyr GTA - ¡û
>C191103892 CP033230 Alphaproteobacteria Sphingobium yanoikuyae SJTF8 [CP033230] 4560570 4560655 + Tyr GTA - ¡û
>C191163675 CP039248 Alphaproteobacteria Sphingobium sp. PAMC28499 [CP039248] 1547303 1547388 + Tyr GTA - ¡û
>C191163792 CP039250 Alphaproteobacteria Sphingopyxis sp. PAMC25046 [CP039250] 1783305 1783390 + Tyr GTA - ¡û
>W141807728 JPOU01000002 Alphaproteobacteria Sphingobium yanoikuyae [JPOU] 169466 169381 - Tyr GTA [ENA] ¡û
>W1910744333 MIAL01000011 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 [MIAL] 41506 41421 - Tyr GTA [ENA] ¡û
>W1910744384 MIAM01000017 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 [MIAM] 11485 11570 + Tyr GTA [ENA] ¡û
>W1910934243 NIWD01000006 Alphaproteobacteria Sphingopyxis sp. GW247-27LB [NIWD] 95274 95189 - Tyr GTA [ENA] ¡û
>W1911114848 NOIW01000156 Alphaproteobacteria Sphingobium sp. IP1 [NOIW] 5799 5714 - Tyr GTA [ENA] ¡û
>W1911688282 QLJK01000004 Alphaproteobacteria Sphingomonas sp. S-NIH.Pt3_0716 [QLJK] 78147 78062 - Tyr GTA [ENA] ¡û
>SRA1000142 SRR001036.54980 Marine Viruses from Arctic Ocean (SRP000129) 92 7 - Tyr GTA [SRA]
>SRA1000157 SRR001036.155457 Marine Viruses from Arctic Ocean (SRP000129) 114 29 - Tyr GTA [SRA]
>SRA1000158 SRR001036.161401 Marine Viruses from Arctic Ocean (SRP000129) 114 29 - Tyr GTA [SRA]
>W1911722417 QRAL01000002 Alphaproteobacteria Sphingobium yanoikuyae SK-NIH.Env6_1116 [QRAL] 266677 266592 - Tyr GTA [ENA] ¡û
>W1810107979 PHFW01000003 Alphaproteobacteria Sphingopyxis lindanitolerans WS5A3p [PHFW] 976871 976956 + Tyr GTA [ENA] ¡û
>C151044399 CP009122 Alphaproteobacteria Sphingopyxis fribergensis Kp5.2 [CP009122] 2530193 2530108 - Tyr GTA [Ensembl] ¡û
>C151051497 CP009452 Alphaproteobacteria Sphingopyxis sp. 113P3 [CP009452] 1635571 1635656 + Tyr GTA - ¡û
>W1510015776 BBRO01000001 Alphaproteobacteria Sphingopyxis sp. C-1 [BBRO] 1460061 1460146 + Tyr GTA [ENA] ¡û
>W1510941309 JFFT01000001 Alphaproteobacteria Sphingobium yanoikuyae SHJ [JFFT] 357367 357452 + Tyr GTA [ENA] ¡û
>W1511221146 JNFC01000002 Alphaproteobacteria Sphingopyxis sp. LC363 [JNFC] 29487 29572 + Tyr GTA [ENA] ¡û
>W1511221229 JNFD01000047 Alphaproteobacteria Sphingopyxis sp. LC81 [JNFD] 193903 193988 + Tyr GTA [ENA] ¡û
>W1511324674 JQFJ01000002 Alphaproteobacteria Sphingopyxis sp. MWB1 [JQFJ] 663573 663488 - Tyr GTA [ENA] ¡û
>W11176461 AFXE01000158 Alphaproteobacteria Sphingobium yanoikuyae XLDN2-5 [AFXE] 85528 85613 + Tyr GTA [ENA] ¡û
>W1610727223 LMGF01000005 Alphaproteobacteria Sphingopyxis sp. Root1497 [LMGF] 530784 530869 + Tyr GTA [ENA] ¡û
>W1610727364 LMGI01000002 Alphaproteobacteria Sphingopyxis sp. Root154 [LMGI] 298671 298586 - Tyr GTA [ENA] ¡û
>W1610729774 LMIG01000004 Alphaproteobacteria Sphingopyxis sp. Root214 [LMIG] 298637 298552 - Tyr GTA [ENA] ¡û
>W1610770859 LNRR01000001 Alphaproteobacteria Sphingopyxis sp. H005 [LNRR] 324238 324323 + Tyr GTA [ENA] ¡û
>W1610770907 LNRS01000001 Alphaproteobacteria Sphingopyxis sp. H012 [LNRS] 426496 426411 - Tyr GTA [ENA] ¡û
>W1610770953 LNRT01000001 Alphaproteobacteria Sphingopyxis sp. H038 [LNRT] 426496 426411 - Tyr GTA [ENA] ¡û
>W1610770996 LNRU01000001 Alphaproteobacteria Sphingopyxis sp. H053 [LNRU] 324322 324407 + Tyr GTA [ENA] ¡û
>W1610771039 LNRV01000003 Alphaproteobacteria Sphingopyxis sp. H077 [LNRV] 22049 22134 + Tyr GTA [ENA] ¡û
>W1610771086 LNRW01000001 Alphaproteobacteria Sphingopyxis sp. H080 [LNRW] 317730 317815 + Tyr GTA [ENA] ¡û
>W1610771131 LNRX01000001 Alphaproteobacteria Sphingopyxis sp. H085 [LNRX] 324235 324320 + Tyr GTA [ENA] ¡û
>W1610771206 LNRY01000018 Alphaproteobacteria Sphingopyxis sp. H093 [LNRY] 79931 79846 - Tyr GTA [ENA] ¡û
>W1610771408 LNSD01000003 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 493171 493086 - Tyr GTA [ENA] ¡û
>W1610771470 LNSE01000008 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 195848 195763 - Tyr GTA [ENA] ¡û
>W1610771506 LNSF01000004 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 493171 493086 - Tyr GTA [ENA] ¡û
>W1610771551 LNSG01000004 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 493172 493087 - Tyr GTA [ENA] ¡û
>W1610771597 LNSH01000007 Alphaproteobacteria Sphingopyxis sp. H081 [LNSH] 195855 195770 - Tyr GTA [ENA] ¡û
>W1610771664 LNSI01000021 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 54863 54778 - Tyr GTA [ENA] ¡û
>W1610771699 LNSJ01000018 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 86303 86218 - Tyr GTA [ENA] ¡û
>W1610920966 LSTR01000026 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 27786 27871 + Tyr GTA [ENA] ¡û
>W1610922580 LSVG01000001 Alphaproteobacteria Sphingobium yanoikuyae [LSVG] 3307 3222 - Tyr GTA [ENA] ¡û
>W1710540050 FNWK01000002 Alphaproteobacteria Sphingopyxis sp. YR583 [FNWK] 713573 713488 - Tyr GTA [ENA] ¡û
>W1710592145 FRCG01000002 Alphaproteobacteria Sphingobium sp. YR657 [FRCG] 445617 445702 + Tyr GTA [ENA] ¡û
>W1710602870 FUYP01000001 Alphaproteobacteria Sphingopyxis flava [FUYP] 380 295 - Tyr GTA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK