tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.154789 (141 seq.)
>W1710807296 LKCX01000001 Betaproteobacteria Curvibacter sp. PAE-UM [LKCX] 154604 154680 + Met CAT [ENA] ¡û
>W1710867321 LMIE01000005 Betaproteobacteria Hydrogenophaga sp. Root209 [LMIE] 204840 204764 - Met CAT [ENA] ¡û
>W1710867462 LMIH01000012 Betaproteobacteria Acidovorax sp. Root217 [LMIH] 245570 245494 - Met CAT [ENA] ¡û
>W1710867568 LMIJ01000030 Betaproteobacteria Acidovorax sp. Root219 [LMIJ] 85972 86048 + Met CAT [ENA] ¡û
>W1710875950 LMOV01000001 Betaproteobacteria Acidovorax sp. Leaf160 [LMOV] 275373 275297 - Met CAT [ENA] ¡û
>W1711384853 MEDL01000142 Betaproteobacteria Acidovorax sp. SCN 68-22 [MEDL] 2263 2187 - Met CAT [ENA] ¡û
>W1711394893 MESN01000344 Betaproteobacteria Burkholderiales bacterium RIFOXYC12_FULL_60_6 [MESN] 69 145 + Met CAT [ENA] ¡û
>W1711395021 MESQ01000083 Betaproteobacteria Burkholderiales bacterium RIFOXYD12_FULL_59_19 [MESQ] 16645 16569 - Met CAT [ENA] ¡û
>W1711395033 MESR01000251 Betaproteobacteria Burkholderiales bacterium RIFOXYD2_FULL_59_8 [MESR] 1931 1855 - Met CAT [ENA] ¡û
>W1711583953 MNXW01000068 Betaproteobacteria Comamonadaceae bacterium CG2_30_57_122 [MNXW] 8227 8151 - Met CAT [ENA] ¡û
>W1711584000 MNXX01000118 Betaproteobacteria Comamonadaceae bacterium CG2_30_59_20 [MNXX] 10113 10189 + Met CAT [ENA] ¡û
>W1711709065 MSYM01000013 Betaproteobacteria Rhodoferax antarcticus ANT.BR [MSYM] 69416 69340 - Met CAT [ENA] ¡û
>W1711721712 MTJN01000002 Betaproteobacteria Rhodoferax fermentans [MTJN] 4257811 4257887 + Met CAT [ENA] ¡û
>W1711751224 MUNO01000039 Betaproteobacteria Polaromonas sp. A23 [MUNO] 37131 37055 - Met CAT [ENA] ¡û
>W1712096706 NIAZ01000008 Betaproteobacteria Acidovorax sp. T1m [NIAZ] 80292 80216 - Met CAT [ENA] ¡û
>W131227111 AUEX01000006 Betaproteobacteria Acidovorax sp. JHL-9 [AUEX] 109591 109667 + Met CAT [ENA] ¡û
>C017305 CP000529 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [CP000529] 3570807 3570883 + Met CAT [Ensembl] ¡û
>C017364 CP000316 Betaproteobacteria Polaromonas sp. JS666 [CP000316] 1159565 1159489 - Met CAT [Ensembl] ¡û
>C026322 CP000542 Betaproteobacteria Verminephrobacter eiseniae EF01-2 [CP000542] 528461 528385 - Met CAT [Ensembl] ¡û
>C171049781 CP016449 Betaproteobacteria Hydrogenophaga sp. RAC07 [CP016449] 3723763 3723839 + Met CAT - ¡û
>C171091748 CP019240 Betaproteobacteria Rhodoferax antarcticus DSM 24876 [CP019240] 898525 898449 - Met CAT - ¡û
>C171118085 CP021359 Betaproteobacteria Acidovorax carolinensis NA2 [CP021359] 765950 765874 - Met CAT - ¡û
>C171118136 CP021361 Betaproteobacteria Acidovorax carolinensis NA3 [CP021361] 755515 755439 - Met CAT - ¡û
>C171118162 CP021362 Betaproteobacteria Acidovorax carolinensis P3 [CP021362] 3215913 3215989 + Met CAT - ¡û
>C171118240 CP021366 Betaproteobacteria Acidovorax carolinensis P4 [CP021366] 863468 863392 - Met CAT - ¡û
>C171120938 CP021648 Betaproteobacteria Acidovorax sp. T1 [CP021648] 3150156 3150232 + Met CAT - ¡û
>WENV180283582 OBID01000867 [OBID] metagenome; sludge 2055 2131 + Met CAT [ENA] ¢þ
>WENV180299426 OBJC01007336 [OBJC] metagenome; water 90 166 + Met CAT [ENA] ¢þ
>WENV180390943 OBPM01000036 [OBPM] marine metagenome; ENVO:00002010 11697 11773 + Met CAT [ENA] ¢þ
>WENV180585196 OCOK01032605 [OCOK] marine metagenome; ENVO:00002010 371 295 - Met CAT [ENA] ¢þ
>WENV180594082 OCOY01031114 [OCOY] marine metagenome; ENVO:00002010 219 143 - Met CAT [ENA] ¢þ
>WENV180647851 OCSI01012342 [OCSI] metagenome; diffuse fluid 191 115 - Met CAT [ENA] ¢þ
>WENV181032032 ODXK01023639 [ODXK] human metagenome; G_DNA_Stool 264 340 + Met CAT [ENA] ¢þ
>WENV181304878 OFID01005152 [OFID] marine metagenome; sea ice 113 189 + Met CAT [ENA] ¢þ
>WENV181323851 OFKZ01013698 [OFKZ] marine metagenome; sea ice 374 298 - Met CAT [ENA] ¢þ
>WENV181324173 OFLC01002645 [OFLC] marine metagenome; melt pond 322 398 + Met CAT [ENA] ¢þ
>WENV181324517 OFLF01000350 [OFLF] marine metagenome; melt pond 3069 2993 - Met CAT [ENA] ¢þ
>WENV181363101 OFOS01000010 [OFOS] sediment metagenome; Lake sediment 77048 77124 + Met CAT [ENA] ¢þ
>WENV181364503 OFOW01000248 [OFOW] sediment metagenome; Lake sediment 3092 3168 + Met CAT [ENA] ¢þ
>WENV181364552 OFOY01000031 [OFOY] sediment metagenome; Lake sediment 31849 31925 + Met CAT [ENA] ¢þ
>WENV181364587 OFOZ01000038 [OFOZ] sediment metagenome; Lake sediment 12763 12839 + Met CAT [ENA] ¢þ
>WENV181364665 OFPA01000055 [OFPA] sediment metagenome; Lake sediment 4504 4428 - Met CAT [ENA] ¢þ
>WENV181364698 OFPB01000006 [OFPB] sediment metagenome; Lake sediment 34102 34026 - Met CAT [ENA] ¢þ
>WENV181364846 OFPE01002183 [OFPE] sediment metagenome; Lake sediment 808 732 - Met CAT [ENA] ¢þ
>WENV181364943 OFPG01000237 [OFPG] sediment metagenome; Lake sediment 4920 4844 - Met CAT [ENA] ¢þ
>WENV181365023 OFPH01000730 [OFPH] sediment metagenome; Lake sediment 1497 1573 + Met CAT [ENA] ¢þ
>WENV181365027 OFPI01000002 [OFPI] sediment metagenome; Lake sediment 4513 4437 - Met CAT [ENA] ¢þ
>WENV181365086 OFPJ01000043 [OFPJ] sediment metagenome; Lake sediment 4480 4404 - Met CAT [ENA] ¢þ
>WENV181365124 OFPK01000002 [OFPK] sediment metagenome; Lake sediment 4537 4461 - Met CAT [ENA] ¢þ
>WENV181365166 OFPL01000002 [OFPL] sediment metagenome; Lake sediment 137269 137345 + Met CAT [ENA] ¢þ
>WENV181365208 OFPL01000523 [OFPL] sediment metagenome; Lake sediment 1551 1475 - Met CAT [ENA] ¢þ
>WENV181365228 OFPM01000309 [OFPM] sediment metagenome; Lake sediment 1030 1106 + Met CAT [ENA] ¢þ
>WENV181365299 OFPN01000056 [OFPN] sediment metagenome; Lake sediment 19039 19115 + Met CAT [ENA] ¢þ
>WENV181365320 OFPO01000047 [OFPO] sediment metagenome; Lake sediment 4504 4428 - Met CAT [ENA] ¢þ
>WENV181365418 OFPQ01001336 [OFPQ] sediment metagenome; Lake sediment 685 761 + Met CAT [ENA] ¢þ
>WENV181367722 OFQC01004610 [OFQC] freshwater metagenome; Freshwater Lake 181 105 - Met CAT [ENA] ¢þ
>WENV181369174 OFQO01006523 [OFQO] freshwater metagenome; Freshwater Lake 250 174 - Met CAT [ENA] ¢þ
>WENV181369701 OFQP01024211 [OFQP] freshwater metagenome; Freshwater Lake 331 407 + Met CAT [ENA] ¢þ
>WENV181370005 OFQR01005531 [OFQR] freshwater metagenome; Freshwater Lake 336 412 + Met CAT [ENA] ¢þ
>WENV181370418 OFQS01010041 [OFQS] freshwater metagenome; Freshwater Lake 465 541 + Met CAT [ENA] ¢þ
>WENV181379178 OFRC01044956 [OFRC] wastewater metagenome; Exp Tend CN 10WW 367 291 - Met CAT [ENA] ¢þ
>WENV181379254 OFRD01000125 [OFRD] wastewater metagenome; Exp Tend CN 100WW 2064 1988 - Met CAT [ENA] ¢þ
>WENV181383929 OFRH01001282 [OFRH] wastewater metagenome; Exp Tend NO 100WW 2917 2993 + Met CAT [ENA] ¢þ
>WENV181395892 OFSB01018069 [OFSB] freshwater metagenome; Freshwater Lake 317 241 - Met CAT [ENA] ¢þ
>WENV181401298 OFSF01113362 [OFSF] wastewater metagenome; Exp Tend VB 100WW 400 324 - Met CAT [ENA] ¢þ
>C08007678 CP000316 Betaproteobacteria Polaromonas sp. JS666 [CP000316] 1159565 1159492 - Met CAT [Ensembl] ¡û
>W141265999 CCJP01000005 Betaproteobacteria Polaromonas sp. CG9_12 CJ2 [CCJP] 2962186 2962110 - Met CAT [ENA] ¡û
>W141278744 JAFU01000001 Betaproteobacteria Acidovorax sp. JHL-3 [JAFU] 14406 14482 + Met CAT [ENA] ¡û
>WENV183661092 ORJL010080388 [ORJL] groundwater metagenome; groundwater 362 286 - Met CAT [ENA] ¢þ
>WENV183681364 ORMF010296200 [ORMF] groundwater metagenome; groundwater 414 338 - Met CAT [ENA] ¢þ
>WENV170018925 BBPD01002158 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 6288 6364 + Met CAT [ENA] ¢þ
>WENV170020106 BBPE01002921 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 6341 6417 + Met CAT [ENA] ¢þ
>WENV170639751 JFJP01006829 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 77 1 - Met CAT [ENA] ¢þ
>WENV170639788 JFJP01007890 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 470 394 - Met CAT [ENA] ¢þ
>WENV170707579 LNAP01026199 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2147 2071 - Met CAT [ENA] ¢þ
>WENV170707927 LNAP01040184 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1924 2000 + Met CAT [ENA] ¢þ
>WENV170708283 LNAP01065316 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1147 1071 - Met CAT [ENA] ¢þ
>WENV170708765 LNAQ01000787 [LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 3809 3885 + Met CAT [ENA] ¢þ
>WENV170711386 LNFM01004993 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 11085 11009 - Met CAT [ENA] ¢þ
>WENV170712860 LNFM01019027 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 19505 19429 - Met CAT [ENA] ¢þ
>WENV170712931 LNFM01020783 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3074 2998 - Met CAT [ENA] ¢þ
>WENV170714478 LNFM01076130 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 317 393 + Met CAT [ENA] ¢þ
>WENV170714540 LNFM01080058 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 314 390 + Met CAT [ENA] ¢þ
>WENV170714629 LNFM01088735 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 90 14 - Met CAT [ENA] ¢þ
>WENV170715154 LNFM01139125 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 584 508 - Met CAT [ENA] ¢þ
>WENV170961846 MLJW01002549 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 2570 2494 - Met CAT [ENA] ¢þ
>WENV170975105 MTKY01091755 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 721 645 - Met CAT [ENA] ¢þ
>C181158585 CP027669 Betaproteobacteria Simplicispira suum SC1-8 [CP027669] 2385705 2385629 - Met CAT - ¡û
>W141561753 JHYS01000005 Betaproteobacteria Simplicispira psychrophila DSM 11588 [JHYS] 61036 61112 + Met CAT [ENA] ¡û
>W141565133 JIBH01000001 Betaproteobacteria Polaromonas sp. EUR3 1.2.1 [JIBH] 645840 645764 - Met CAT [ENA] ¡û
>W141695488 JMDZ01000014 Betaproteobacteria Polaromonas glacialis [JMDZ] 26712 26636 - Met CAT [ENA] ¡û
>W09101603 AAFQ02000002 Betaproteobacteria Polaromonas sp. JS666 [AAFQ] 387899 387975 + Met CAT [ENA] ¡û
>W09104877 AANM01000017 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [AANM] 30383 30459 + Met CAT [ENA] ¡û
>W09106046 AASQ01000016 Betaproteobacteria Verminephrobacter eiseniae EF01-2 [AASQ] 18428 18352 - Met CAT [ENA] ¡û
>W09133909 ACQT01000028 Betaproteobacteria Acidovorax delafieldii 2AN [ACQT] 20775 20699 - Met CAT [ENA] ¡û
>W1910699872 MERZ01000058 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 [MERZ] 1152 1076 - Met CAT [ENA] ¡û
>W1910700238 MESI01000039 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 [MESI] 6536 6612 + Met CAT [ENA] ¡û
>W1910728395 MGWY01000107 Betaproteobacteria Gallionellales bacterium RIFCSPLOWO2_02_60_31 [MGWY] 19 95 + Met CAT [ENA] ¡û
>W1910859513 NBZV01000035 Betaproteobacteria Polaromonas sp. AER18D-145 [NBZV] 43479 43403 - Met CAT [ENA] ¡û
>W1910859535 NBZW01000003 Betaproteobacteria Polaromonas sp. AET17H-212 [NBZW] 261762 261686 - Met CAT [ENA] ¡û
>W1910888465 NERU01000026 Betaproteobacteria Limnohabitans sp. WS1 [NERU] 10249 10173 - Met CAT [ENA] ¡û
>W1910888490 NERV01000002 Betaproteobacteria Limnohabitans sp. T6-5 [NERV] 836230 836154 - Met CAT [ENA] ¡û
>W1910888931 NESG01000003 Betaproteobacteria Limnohabitans sp. G3-2 [NESG] 219422 219346 - Met CAT [ENA] ¡û
>W1910888982 NESH01000003 Betaproteobacteria Limnohabitans sp. Bal53 [NESH] 279661 279737 + Met CAT [ENA] ¡û
>W1910889077 NESJ01000018 Betaproteobacteria Limnohabitans sp. 2KL-51 [NESJ] 67885 67961 + Met CAT [ENA] ¡û
>W1910889120 NESK01000034 Betaproteobacteria Limnohabitans sp. 2KL-17 [NESK] 509 433 - Met CAT [ENA] ¡û
>W1910889125 NESL01000001 Betaproteobacteria Limnohabitans sp. 2KL-1 [NESL] 840695 840771 + Met CAT [ENA] ¡û
>W1910889178 NESM01000001 Betaproteobacteria Limnohabitans sp. 15K [NESM] 1029460 1029384 - Met CAT [ENA] ¡û
>W1910889239 NESN01000002 Betaproteobacteria Limnohabitans parvus II-B4 [NESN] 31203 31127 - Met CAT [ENA] ¡û
>W1911770738 QXJC01000003 Betaproteobacteria Simplicispira hankyongi NY-02 [QXJC] 461286 461362 + Met CAT [ENA] ¡û
>W1911775413 QXNC01000012 Betaproteobacteria Simplicispira metamorpha NBRC 13960 [QXNC] 92484 92408 - Met CAT [ENA] ¡û
>SRA1002834 SRR002326.46698 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 145 69 - Met CAT [SRA]
>SRA1003630 SRR002327.76046 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 224 148 - Met CAT [SRA]
>W1810486290 QAXU01000001 Betaproteobacteria Acidovorax sp. CF301 [QAXU] 153652 153576 - Met CAT [ENA] ¡û
>W1810570307 QEII01000269 Betaproteobacteria Rhodoferax ferrireducens OTU1 [QEII] 142494 142570 + Met CAT [ENA] ¡û
>W1810577628 QEOJ01000006 Betaproteobacteria Rhodoferax sp. YR267 [QEOJ] 326309 326385 + Met CAT [ENA] ¡û
>W1810677461 QKMS01000007 Betaproteobacteria Acidovorax sp. OV235 [QKMS] 43070 43146 + Met CAT [ENA] ¡û
>W1810697071 QLTU01000006 Betaproteobacteria Acidovorax defluvii DSM 12644 [QLTU] 61829 61753 - Met CAT [ENA] ¡û
>W1810750695 QOZT01000036 Betaproteobacteria Acidovorax sp. BoFeN1 [QOZT] 21108 21184 + Met CAT [ENA] ¡û
>W1510720099 CXON01000006 Betaproteobacteria Limnohabitans sp. 2KL-3 [CXON] 182130 182054 - Met CAT [ENA] ¡û
>W1510720128 CXOO01000010 Betaproteobacteria Limnohabitans sp. DM1 [CXOO] 319252 319176 - Met CAT [ENA] ¡û
>W1510720180 CXOP01000002 Betaproteobacteria Limnohabitans sp. 2KL-27 [CXOP] 901257 901333 + Met CAT [ENA] ¡û
>W11155853 AFAL01000431 Betaproteobacteria Verminephrobacter aporrectodeae At4 [AFAL] 4010 3934 - Met CAT [ENA] ¡û
>W1511691387 LFYT01000003 Betaproteobacteria Limnohabitans planktonicus II-D5 [LFYT] 794517 794441 - Met CAT [ENA] ¡û
>C161037068 CP011774 Betaproteobacteria Limnohabitans sp. 63ED37-2 [CP011774] 2599562 2599486 - Met CAT [Ensembl] ¡û
>W121112438 ALKN01000043 Betaproteobacteria Limnohabitans sp. Rim28 [ALKN] 22343 22419 + Met CAT [ENA] ¡û
>W121112482 ALKO01000020 Betaproteobacteria Limnohabitans sp. Rim47 [ALKO] 131522 131598 + Met CAT [ENA] ¡û
>W121086415 AKJX01000097 Betaproteobacteria Acidovorax sp. CF316 [AKJX] 94566 94642 + Met CAT [ENA] ¡û
>W1610076187 BCYO01000001 Betaproteobacteria Polaromonas jejuensis NBRC 106434 [BCYO] 417777 417701 - Met CAT [ENA] ¡û
>W1610189989 FBYA01000005 Betaproteobacteria Limnohabitans sp. Rim47 [FBYA] 23839 23763 - Met CAT [ENA] ¡û
>W1610671400 LKCX01000001 Betaproteobacteria Curvibacter sp. PAE-UM [LKCX] 154604 154680 + Met CAT [ENA] ¡û
>W1610729667 LMIE01000005 Betaproteobacteria Hydrogenophaga sp. Root209 [LMIE] 204840 204764 - Met CAT [ENA] ¡û
>W1610729808 LMIH01000012 Betaproteobacteria Acidovorax sp. Root217 [LMIH] 245570 245494 - Met CAT [ENA] ¡û
>W1610729914 LMIJ01000030 Betaproteobacteria Acidovorax sp. Root219 [LMIJ] 85972 86048 + Met CAT [ENA] ¡û
>W1610738296 LMOV01000001 Betaproteobacteria Acidovorax sp. Leaf160 [LMOV] 275373 275297 - Met CAT [ENA] ¡û
>W1710074002 BCYO01000001 Betaproteobacteria Polaromonas jejuensis NBRC 106434 [BCYO] 417777 417701 - Met CAT [ENA] ¡û
>W1710191605 FBYA01000005 Betaproteobacteria Limnohabitans sp. Rim47 [FBYA] 23839 23763 - Met CAT [ENA] ¡û
>W1710524822 FNJA01000005 Betaproteobacteria Rhodoferax sp. OV413 OV413 [FNJA] 209261 209337 + Met CAT [ENA] ¡û
>W1710532506 FNQJ01000002 Betaproteobacteria Acidovorax soli [FNQJ] 260815 260891 + Met CAT [ENA] ¡û
>W1710551542 FOGD01000011 Betaproteobacteria Giesbergeria anulus [FOGD] 59617 59693 + Met CAT [ENA] ¡û
>W1710557393 FOKZ01000007 Betaproteobacteria Polaromonas sp. OV174 [FOKZ] 113980 113904 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK