This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.156069 (12 seq.)
>W1711136330
LVAC01000002
Campylobacterota
Campylobacterales bacterium Epsilon_01 [LVAC]
382000
382077
+
Pro
GGG
[ENA]
¡û
>C171057215
CP017111
Campylobacterota
Sulfurospirillum halorespirans DSM 13726 DSM 13726; PCE-M2 [CP017111]
1566399
1566322
-
Pro
GGG
-
¡û
>WENV170640737
JFJP01024274
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
6173
6250
+
Pro
GGG
[ENA]
¢þ
>W09110106
ABUV01000006
Campylobacterota
Sulfurospirillum deleyianum DSM 6946 [ABUV]
98214
98137
-
Pro
GGG
[ENA]
¡û
>C151018390
CP007201
Campylobacterota
Sulfurospirillum multivorans DSM 12446 [CP007201]
1554734
1554657
-
Pro
GGG
[Ensembl]
¡û
>W1510014707
BBQE01000001
Campylobacterota
Sulfurospirillum cavolei NBRC 109482 [BBQE]
185036
185113
+
Pro
GGG
[ENA]
¡û
>C10111316
CP001816
Campylobacterota
Sulfurospirillum deleyianum DSM 6946 [CP001816]
1040836
1040913
+
Pro
GGG
[Ensembl]
¡û
>W1511365469
JSEC01000005
Campylobacterota
Sulfurospirillum sp. MES [JSEC]
143384
143307
-
Pro
GGG
[ENA]
¡û
>C121011179
CP003333
Campylobacterota
Sulfurospirillum barnesii SES-3 [CP003333]
1239032
1238955
-
Pro
GGG
[Ensembl]
¡û
>C161001378
AP014723
Campylobacterota
Sulfurospirillum sp. UCH001 [AP014723]
1369575
1369498
-
Pro
GGG
-
¡û
>C161001405
AP014724
Campylobacterota
Sulfurospirillum cavolei UCH003 [AP014724]
1280607
1280684
+
Pro
GGG
-
¡û
>W1610947450
LVAC01000002
Campylobacterota
Campylobacterales bacterium Epsilon_01 [LVAC]
382000
382077
+
Pro
GGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK