Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.156304 (17 seq.)
	>A171000685	CP001463	Euryarchaeota	Thermococcus sibiricus MM 739 [CP001463]	371071	371148	+	Pro	TGG	-	○
	>A171003767	CP006019	Euryarchaeota	Palaeococcus pacificus DY20341 [CP006019]	462461	462538	+	Pro	TGG	-	○
	>A171003903	CP006670	Euryarchaeota	Thermococcus litoralis DSM 5473 [CP006670]	480851	480774	-	Pro	TGG	-	○
	>A171006346	CP012200	Euryarchaeota	Thermococcus sp. 2319x1 [CP012200]	282314	282391	+	Pro	TGG	-	○
	>A171006600	CP014750	Euryarchaeota	Thermococcus peptonophilus OG-1 [CP014750]	1485964	1485887	-	Pro	TGG	-	○
	>At1929	AP006878	Euryarchaeota	Thermococcus kodakarensis KOD1 [AP006878]	1249406	1249483	+	Pro	TGG	[Ensembl]	○
	>WENV170675987	LDZQ01001625	[LDZQ] terrestrial metagenome; oil reservoir sample I2		4196	4119	-	Pro	TGG	[ENA]	◯
	>WENV170676313	LDZR01002238	[LDZR] terrestrial metagenome; oil reservoir sample K2		101	178	+	Pro	TGG	[ENA]	◯
	>WENV170676720	LDZS01002036	[LDZS] terrestrial metagenome; oil reservoir sample K3		8995	9072	+	Pro	TGG	[ENA]	◯
	>W1910200324	FJMQ01000103	Euryarchaeota	Thermococcus litoralis [FJMQ]	28558	28481	-	Pro	TGG	[ENA]	○
	>W1910597276	LANF01000010	Euryarchaeota	Palaeococcus ferrophilus DSM 13482 [LANF]	15575	15498	-	Pro	TGG	[ENA]	○
	>W1610004925	AHVB01000044	Euryarchaeota	Thermococcus litoralis DSM 5473 [AHVB]	22068	21991	-	Pro	TGG	[ENA]	○
	>W1610005563	AKID01000006	Euryarchaeota	Thermococcus sp. PK [AKID]	19653	19576	-	Pro	TGG	[ENA]	○
	>W1610548878	JXCG01000004	Euryarchaeota	Thermococcus sp. EP1 [JXCG]	125732	125655	-	Pro	TGG	[ENA]	○
	>W1610612449	LGET01000084	Euryarchaeota	Thermococcales archaeon 44_46 [LGET]	4196	4119	-	Pro	TGG	[ENA]	○
	>W1610612818	LGFD01000017	Euryarchaeota	Thermococcus sibiricus [LGFD]	101	178	+	Pro	TGG	[ENA]	○
	>W1610613032	LGFJ01000007	Euryarchaeota	Thermococcus sp. 40_45 [LGFJ]	8995	9072	+	Pro	TGG	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK