tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.158933 (68 seq.)
>W1710797770 LJTD01000017 Gammaproteobacteria Cobetia sp. UCD-24C [LJTD] 30475 30551 + Met CAT [ENA] ¡û
>W1711414026 MGXL01000019 Gammaproteobacteria Gammaproteobacteria bacterium RBG_16_57_12 [MGXL] 486 562 + Met CAT [ENA] ¡û
>W1711666809 MRCI01000001 Gammaproteobacteria Neptunomonas phycophila [MRCI] 2550848 2550772 - Met CAT [ENA] ¡û
>W1711666810 MRCI01000001 Gammaproteobacteria Neptunomonas phycophila [MRCI] 2544142 2544066 - Met CAT [ENA] ¡û
>W1711666841 MRCJ01000001 Gammaproteobacteria Neptunomonas phycophila [MRCJ] 431064 430988 - Met CAT [ENA] ¡û
>W1711666842 MRCJ01000001 Gammaproteobacteria Neptunomonas phycophila [MRCJ] 424360 424284 - Met CAT [ENA] ¡û
>W1711957952 NBVS01000013 Gammaproteobacteria Cobetia sp. QF-1 [NBVS] 28759 28835 + Met CAT [ENA] ¡û
>W131175720 ARJM01000032 Gammaproteobacteria Marinobacterium rhizophilum DSM 18822 [ARJM] 13528 13604 + Met CAT [ENA] ¡û
>W131175722 ARJM01000039 Gammaproteobacteria Marinobacterium rhizophilum DSM 18822 [ARJM] 84892 84968 + Met CAT [ENA] ¡û
>W131175725 ARJM01000041 Gammaproteobacteria Marinobacterium rhizophilum DSM 18822 [ARJM] 30409 30485 + Met CAT [ENA] ¡û
>w023532 AAXY01000005 Gammaproteobacteria Marinobacter sp. ELB17 [AAXY] 208934 208861 - Met CAT [ENA] ¡û
>C171057433 CP017114 Gammaproteobacteria Cobetia marina JCM 21022 [CP017114] 265640 265564 - Met CAT - ¡û
>WENV180042515 LQAF01000756 [LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that 822 746 - fMet CAT [ENA] ¢þ
>WENV180042534 LQAF01002396 [LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that 1273 1349 + fMet CAT [ENA] ¢þ
>WENV180562612 OCLB01028901 [OCLB] human gut metagenome; human gut 136 61 - fMet CAT [ENA] ¢þ
>WENV180565928 OCLH01017039 [OCLH] human gut metagenome; human gut 150 76 - fMet CAT [ENA] ¢þ
>W141055171 AONB01000001 Gammaproteobacteria Nitrincola nitratireducens AK23 [AONB] 29980 29904 - Met CAT [ENA] ¡û
>W141055205 AONB01000027 Gammaproteobacteria Nitrincola nitratireducens AK23 [AONB] 11705 11781 + Met CAT [ENA] ¡û
>WENV181307155 OFIP01001581 [OFIP] marine metagenome; seawater 461 537 + fMet CAT [ENA] ¢þ
>WENV181313272 OFJF01008266 [OFJF] marine metagenome; seawater 201 125 - fMet CAT [ENA] ¢þ
>WENV181318988 OFKC01001643 [OFKC] marine metagenome; seawater 833 757 - fMet CAT [ENA] ¢þ
>WENV183308292 OLTZ01000100 [OLTZ] human gut metagenome; faeces 586 661 + fMet CAT [ENA] ¢þ
>WENV183618103 OOFN01000054 [OOFN] marine metagenome; seawater 1464 1388 - fMet CAT [ENA] ¢þ
>WENV183658205 OQWM01000726 [OQWM] human gut metagenome; human gut 14858 14933 + fMet CAT [ENA] ¢þ
>WENV183706546 PDWI01004649 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 8911 8835 - fMet CAT [ENA] ¢þ
>WENV183718341 PDWJ01003422 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 11276 11200 - fMet CAT [ENA] ¢þ
>WENV170015510 AZIH01001814 [AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port 697 773 + Met CAT [ENA] ¢þ
>WENV170015564 AZIH01005141 [AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port 1914 1838 - Met CAT [ENA] ¢þ
>WENV170024198 BCQL01029658 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 241 165 - Met CAT [ENA] ¢þ
>WENV170112546 CEGF01002734 [CEGF] microbial mat metagenome; grass silage 864 788 - Met CAT [ENA] ¢þ
>WENV170308168 CESL01007079 [CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 416 340 - Met CAT [ENA] ¢þ
>WENV170320995 CESR01022966 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 251 327 + Met CAT [ENA] ¢þ
>WENV170336456 CETA01012516 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 837 761 - Met CAT [ENA] ¢þ
>WENV170340510 CETC01004075 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 581 505 - Met CAT [ENA] ¢þ
>WENV170361447 CETM01008608 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 22854 22778 - Met CAT [ENA] ¢þ
>WENV170575707 FPHJ01000049 [FPHJ] hydrothermal vent metagenome genome assembly, contig: NODE_9.; water 13389 13465 + Met CAT [ENA] ¢þ
>WENV170611192 FUWD012231526 [FUWD] metagenome; unknown 73 147 + Met CAT [ENA] ¢þ
>WENV170612308 FUWD012570045 [FUWD] metagenome; unknown 202 278 + Met CAT [ENA] ¢þ
>WENV170621252 FUWD013053689 [FUWD] metagenome; unknown 1285 1361 + Met CAT [ENA] ¢þ
>WENV170629433 FUWD013270154 [FUWD] metagenome; unknown 1285 1361 + Met CAT [ENA] ¢þ
>WENV170928554 MDTG01135693 [MDTG] marine metagenome; seawater 789 713 - Met CAT [ENA] ¢þ
>C181164741 CP028367 Gammaproteobacteria Halomonas sp. SF2003 [CP028367] 2995928 2995852 - Met CAT - ¡û
>W141815637 JQJA01000045 Gammaproteobacteria Cobetia amphilecti marina [JQJA] 3551 3627 + Met CAT [ENA] ¡û
>W1910184113 BJOH01000098 Gammaproteobacteria Cobetia marina NBRC 15607 [BJOH] 2359 2435 + Met CAT [ENA] ¡û
>W1910237310 FPLA01000013 Gammaproteobacteria Cobetia marina MM1IDA2H-1 [FPLA] 22431 22355 - Met CAT [ENA] ¡û
>W1910808558 MUEJ01000010 Gammaproteobacteria Cobetia sp. MM1IDA2H-1 [MUEJ] 22431 22355 - Met CAT [ENA] ¡û
>W1910923677 NIHC01000004 Gammaproteobacteria Marinobacter salexigens HJR7 [NIHC] 58230 58306 + Met CAT [ENA] ¡û
>W1810057868 PDJA01000001 Gammaproteobacteria Marinobacter sp. LV10MA510-1 [PDJA] 216088 216164 + Met CAT [ENA] ¡û
>W1810058532 PDJM01000001 Gammaproteobacteria Marinobacter sp. LV10R520-4 [PDJM] 3014372 3014448 + Met CAT [ENA] ¡û
>W1810680777 QKRX01000001 Gammaproteobacteria Nitrincola tibetensis xg18 [QKRX] 166580 166504 - Met CAT [ENA] ¡û
>W1810680820 QKRX01000020 Gammaproteobacteria Nitrincola tibetensis xg18 [QKRX] 11809 11885 + Met CAT [ENA] ¡û
>W1511349161 JRLB01000002 Gammaproteobacteria Nitrincola sp. A-D6 [JRLB] 9033 9109 + Met CAT [ENA] ¡û
>W1511349174 JRLB01000034 Gammaproteobacteria Nitrincola sp. A-D6 [JRLB] 9027 9103 + Met CAT [ENA] ¡û
>W1511349191 JRLB01000092 Gammaproteobacteria Nitrincola sp. A-D6 [JRLB] 11796 11872 + Met CAT [ENA] ¡û
>C161091139 CP015839 Gammaproteobacteria Marinobacterium aestuarii ST58-10 [CP015839] 1243015 1243091 + Met CAT [Ensembl] ¡û
>C161091140 CP015839 Gammaproteobacteria Marinobacterium aestuarii ST58-10 [CP015839] 1248590 1248666 + Met CAT [Ensembl] ¡û
>C161091141 CP015839 Gammaproteobacteria Marinobacterium aestuarii ST58-10 [CP015839] 1276485 1276561 + Met CAT [Ensembl] ¡û
>C161091177 CP015839 Gammaproteobacteria Marinobacterium aestuarii ST58-10 [CP015839] 5066989 5066913 - Met CAT [Ensembl] ¡û
>W1610062693 BCNS01000088 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 21101 21025 - Met CAT [ENA] ¡û
>W1610062740 BCNS01000208 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 45666 45590 - Met CAT [ENA] ¡û
>W1610062741 BCNS01000208 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 44790 44714 - Met CAT [ENA] ¡û
>W1610062742 BCNS01000208 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 16679 16603 - Met CAT [ENA] ¡û
>C131005675 CP003735 Gammaproteobacteria Marinobacter sp. BSs20148 [CP003735] 1242233 1242309 + Met CAT [Ensembl] ¡û
>W1610661727 LJTD01000017 Gammaproteobacteria Cobetia sp. UCD-24C [LJTD] 30475 30551 + Met CAT [ENA] ¡û
>W1710060169 BCNS01000088 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 21101 21025 - Met CAT [ENA] ¡û
>W1710060216 BCNS01000208 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 45666 45590 - Met CAT [ENA] ¡û
>W1710060217 BCNS01000208 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 44790 44714 - Met CAT [ENA] ¡û
>W1710060218 BCNS01000208 Gammaproteobacteria Marinobacterium profundum PAMC 27536 [BCNS] 16679 16603 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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