tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.162621 (91 seq.)
>W1710892543 LNDV01000034 Betaproteobacteria Betaproteobacteria bacterium Ga0077526 [LNDV] 215371 215295 - Gln TTG [ENA] ¡û
>W1711421838 MHZW01000246 Betaproteobacteria Rhodocyclales bacterium GWA2_65_20 [MHZW] 8803 8879 + Gln TTG [ENA] ¡û
>W1711710517 MSZN01000017 Betaproteobacteria Alcaligenes faecalis [MSZN] 83360 83436 + Gln TTG [ENA] ¡û
>W1711710602 MSZP01000004 Betaproteobacteria Alcaligenes faecalis [MSZP] 254307 254231 - Gln TTG [ENA] ¡û
>W1711710698 MSZR01000005 Betaproteobacteria Alcaligenes faecalis [MSZR] 108823 108899 + Gln TTG [ENA] ¡û
>W1711751386 MUNS01000020 Betaproteobacteria Polaromonas sp. C04 [MUNS] 321550 321474 - Gln TTG [ENA] ¡û
>W1712110576 NJIX01000004 Betaproteobacteria Achromobacter sp. HZ34 [NJIX] 694012 694088 + Gln TTG [ENA] ¡û
>W1712110606 NJIY01000003 Betaproteobacteria Achromobacter sp. HZ28 [NJIY] 694012 694088 + Gln TTG [ENA] ¡û
>C171016578 CP012334 Betaproteobacteria Bordetella sp. H567 [CP012334] 541812 541888 + Gln TTG - ¡û
>C171049731 CP016448 Betaproteobacteria Methyloversatilis sp. RAC08 [CP016448] 2931913 2931989 + Gln TTG - ¡û
>C171115723 CP021108 Betaproteobacteria Bordetella genomosp. 8 AU19157 [CP021108] 615836 615912 + Gln TTG - ¡û
>C171115770 CP021109 Betaproteobacteria Bordetella genomosp. 9 AU17164 [CP021109] 545133 545211 + Gln TTG - ¡û
>C171115817 CP021110 Betaproteobacteria Bordetella genomosp. 9 AU14267 [CP021110] 433321 433399 + Gln TTG - ¡û
>W131052477 AMYZ01000008 Betaproteobacteria beta proteobacterium L13 [AMYZ] 162264 162340 + Gln TTG [ENA] ¡û
>W131052478 AMYZ01000008 Betaproteobacteria beta proteobacterium L13 [AMYZ] 162364 162440 + Gln TTG [ENA] ¡û
>WENV180000115 CZVZ01001032 [CZVZ] metagenome; unknown 294 370 + Gln TTG [ENA] ¢þ
>WENV180260252 OBEQ011183087 [OBEQ] groundwater metagenome; groundwater 561 637 + Gln TTG [ENA] ¢þ
>WENV180372308 OBOI01055692 [OBOI] sediment metagenome; sediment 185 261 + Gln TTG [ENA] ¢þ
>WENV180377324 OBON01011008 [OBON] marine metagenome; sea water 455 379 - Gln TTG [ENA] ¢þ
>WENV180591159 OCOV01001372 [OCOV] marine metagenome; ENVO:01000301 1516 1439 - Gln TTG [ENA] ¢þ
>W141104411 AVOG02000003 Betaproteobacteria Alcaligenes sp. EGD-AK7 [AVOG] 50906 50830 - Gln TTG [ENA] ¡û
>WENV181189236 OEOF01011695 [OEOF] activated sludge metagenome; Activated Sludge 195 119 - Gln TTG [ENA] ¢þ
>WENV181367524 OFQB01006502 [OFQB] freshwater metagenome; Freshwater Lake 718 642 - Gln TTG [ENA] ¢þ
>WENV181368118 OFQK01000073 [OFQK] freshwater metagenome; Freshwater Lake 147 71 - Gln TTG [ENA] ¢þ
>WENV181385132 OFRI01038054 [OFRI] wastewater metagenome; Exp Tend VB 90WW 313 389 + Gln TTG [ENA] ¢þ
>WENV181415775 OGCL01024948 [OGCL] hot springs metagenome; Hot spring water 1733 1657 - Gln TTG [ENA] ¢þ
>WENV181415776 OGCL01024948 [OGCL] hot springs metagenome; Hot spring water 1633 1557 - Gln TTG [ENA] ¢þ
>WENV181415777 OGCL01024948 [OGCL] hot springs metagenome; Hot spring water 1533 1457 - Gln TTG [ENA] ¢þ
>WENV181834854 OGVG01003284 [OGVG] freshwater metagenome; freshwater 492 568 + Gln TTG [ENA] ¢þ
>WENV183662316 ORJL010180318 [ORJL] groundwater metagenome; groundwater 827 903 + Gln TTG [ENA] ¢þ
>WENV183666892 ORJL010593862 [ORJL] groundwater metagenome; groundwater 663 587 - Gln TTG [ENA] ¢þ
>WENV183680904 ORMF010237408 [ORMF] groundwater metagenome; groundwater 381135 381212 + Gln TTG [ENA] ¢þ
>WENV183694961 ORMF012311771 [ORMF] groundwater metagenome; groundwater 2402 2326 - Gln TTG [ENA] ¢þ
>WENV183727790 PJTP01000355 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 973 1049 + Gln TTG [ENA] ¢þ
>WENV170130913 CENR01066286 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 726 650 - Gln TTG [ENA] ¢þ
>WENV170136283 CENV01019537 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 55343 55419 + Gln TTG [ENA] ¢þ
>WENV170193744 CEPI01011139 [CEPI] marine metagenome genome assembly TARA_041_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 539 463 - Gln TTG [ENA] ¢þ
>WENV170200533 CEPN01036360 [CEPN] marine metagenome genome assembly TARA_038_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 27 103 + Gln TTG [ENA] ¢þ
>WENV170200896 CEPP01007265 [CEPP] marine metagenome genome assembly TARA_042_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1342 1418 + Gln TTG [ENA] ¢þ
>WENV170260480 CEQZ01051302 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 756 832 + Gln TTG [ENA] ¢þ
>WENV170550649 CXWF01008357 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 497 573 + Gln TTG [ENA] ¢þ
>WENV170554077 CXWK01045527 [CXWK] wastewater metagenome; activated sludge 1009 933 - Gln TTG [ENA] ¢þ
>WENV170556879 CXWL01015513 [CXWL] groundwater metagenome; biofilm material 9249 9173 - Gln TTG [ENA] ¢þ
>WENV170572283 FLOH01000698 [FLOH] marine metagenome; water 38641 38717 + Gln TTG [ENA] ¢þ
>WENV170639605 JFJP01005308 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4985 4909 - Gln TTG [ENA] ¢þ
>WENV170639709 JFJP01006106 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 3508 3584 + Gln TTG [ENA] ¢þ
>WENV170668717 LAHQ01021524 [LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over 287 211 - Gln TTG [ENA] ¢þ
>WENV170668945 LAHR01000208 [LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over 285 361 + Gln TTG [ENA] ¢þ
>WENV170686183 LFRM01130409 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 2680 2604 - Gln TTG [ENA] ¢þ
>WENV170705392 LNAO01000044 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1566 1642 + Gln TTG [ENA] ¢þ
>WENV170705784 LNAP01000292 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 8696 8620 - Gln TTG [ENA] ¢þ
>WENV170708693 LNAQ01000002 [LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 19701 19625 - Gln TTG [ENA] ¢þ
>WENV170708844 LNFM01000004 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 141819 141743 - Gln TTG [ENA] ¢þ
>WENV170961918 MLJW01006799 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 441 365 - Gln TTG [ENA] ¢þ
>WENV170965848 MTEV01006753 [MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine 662 586 - Gln TTG [ENA] ¢þ
>C191091150 CP032521 Betaproteobacteria Alcaligenes faecalis J481 [CP032521] 3117175 3117251 + Gln TTG - ¡û
>W1910700141 MESG01000001 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 [MESG] 30068 30144 + Gln TTG [ENA] ¡û
>W1910700209 MESH01000247 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_67_14 [MESH] 27379 27455 + Gln TTG [ENA] ¡û
>W1910700421 MESM01001308 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210 [MESM] 176 252 + Gln TTG [ENA] ¡û
>W1910744091 MHZX01000140 Betaproteobacteria Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 [MHZX] 30610 30534 - Gln TTG [ENA] ¡û
>W1910890586 NEVJ01000001 Betaproteobacteria Bordetella genomosp. 9 9 AU21707 [NEVJ] 478780 478855 + Gln TTG [ENA] ¡û
>W1910890745 NEVM01000001 Betaproteobacteria Bordetella genomosp. 10 10 AU16122 [NEVM] 564122 564197 + Gln TTG [ENA] ¡û
>W1910891057 NEVS01000001 Betaproteobacteria Bordetella genomosp. 11 11 AU8856 [NEVS] 565572 565647 + Gln TTG [ENA] ¡û
>W1911180910 NQOU01000008 Betaproteobacteria Neopusillimonas maritima 17-4A [NQOU] 55267 55343 + Gln TTG [ENA] ¡û
>W1911192804 NQYH01000016 Betaproteobacteria Neopusillimonas maritima L52-1-41 [NQYH] 45090 45166 + Gln TTG [ENA] ¡û
>W1911641126 PYAL01000003 Betaproteobacteria Achromobacter aloeverae AVA-1 [PYAL] 612668 612743 + Gln TTG [ENA] ¡û
>W1810005508 BFBP01000013 Betaproteobacteria Azospira sp. I13 [BFBP] 215383 215459 + Gln TTG [ENA] ¡û
>W1810063612 PDUX01000002 Betaproteobacteria Pusillimonas noertemannii DSM 10065 [PDUX] 798132 798208 + Gln TTG [ENA] ¡û
>SRA1002212 SRR001308.306514 Metagenomic characterization of a wastewater treatment plant (SRP000180) 141 217 + Gln TTG [SRA]
>W1810594330 QFZK01000003 Betaproteobacteria Rhodoferax lacus IMCC26218 [QFZK] 117063 116987 - Gln TTG [ENA] ¡û
>W1810721011 QNRQ01000008 Betaproteobacteria Eoetvoesiella caeni DSM 25520 [QNRQ] 163085 163161 + Gln TTG [ENA] ¡û
>W1810759295 QPJH01000008 Betaproteobacteria Pusillimonas sp. EA3 [QPJH] 172154 172230 + Gln TTG [ENA] ¡û
>C151000919 AP012547 Betaproteobacteria Sulfuritalea hydrogenivorans sk43H DSM 22779 [AP012547] 3465525 3465449 - Gln TTG [Ensembl] ¡û
>C151071187 CP010554 Betaproteobacteria Rugosibacter aromaticivorans Ca6 [CP010554] 330778 330855 + Gln TTG [Ensembl] ¡û
>ENV09000626 ABSP01004210 Freshwater sediment metagenome lwMethane_C1 361 285 - Gln TTG [ENA] ¡û
>ENV09000951 ABSQ01002022 Freshwater sediment metagenome lwMethenol_C1 1076 1000 - Gln TTG [ENA] ¡û
>W11114400 ADDK02000001 Betaproteobacteria Azospira oryzae PS [ADDK] 1851400 1851476 + Gln TTG [ENA] ¡û
>C11118214 CP002663 Betaproteobacteria Pusillimonas sp. T7-7 [CP002663] 2258992 2258916 - Gln TTG [Ensembl] ¡û
>W1511678886 LFDT01000028 Betaproteobacteria Vogesella sp. EB [LFDT] 19895 19971 + Gln TTG [ENA] ¡û
>W1511678887 LFDT01000028 Betaproteobacteria Vogesella sp. EB [LFDT] 19997 20073 + Gln TTG [ENA] ¡û
>W1511680892 LFHA01000002 Betaproteobacteria Achromobacter xylosoxidans CF304 [LFHA] 268813 268737 - Gln TTG [ENA] ¡û
>C121006929 CP003153 Betaproteobacteria Azospira oryzae PS [CP003153] 1068032 1068108 + Gln TTG [Ensembl] ¡û
>C161094149 CP016170 Betaproteobacteria Bordetella bronchialis AU3182 [CP016170] 613140 613216 + Gln TTG - ¡û
>C161094196 CP016171 Betaproteobacteria Bordetella bronchialis AU17976 [CP016171] 598577 598653 + Gln TTG [Ensembl] ¡û
>C161094243 CP016172 Betaproteobacteria Bordetella flabilis AU10664 [CP016172] 629844 629920 + Gln TTG [Ensembl] ¡û
>W1610074441 BCWR01000012 Betaproteobacteria Hydrogenophaga taeniospiralis NBRC 102512 [BCWR] 56142 56218 + Gln TTG [ENA] ¡û
>W1610093537 CYTB01000001 Betaproteobacteria Alcaligenes faecalis ATCC8750 [CYTB] 175714 175790 + Gln TTG [ENA] ¡û
>W1610752809 LNDV01000034 Betaproteobacteria Betaproteobacteria bacterium Ga0077526 [LNDV] 215371 215295 - Gln TTG [ENA] ¡û
>W1710071559 BCWR01000012 Betaproteobacteria Hydrogenophaga taeniospiralis NBRC 102512 [BCWR] 56142 56218 + Gln TTG [ENA] ¡û
>W1710082513 BDHG01000002 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG] 175733 175809 + Gln TTG [ENA] ¡û
>W1710586401 FQXE01000002 Betaproteobacteria Pollutimonas bauzanensis [FQXE] 38435 38359 - Gln TTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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