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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.164181 (7 seq.)
>W1711395156
MESV01000036
Unclassified
candidate division CPR3 bacterium GWE2_35_7 [MESV]
32
105
+
Arg
TCT
[ENA]
¡û
>W1711395189
MESW01000003
Unclassified
candidate division CPR3 bacterium GWF2_35_18 [MESW]
9030
8957
-
Arg
TCT
[ENA]
¡û
>W1711395228
MESX01000005
Unclassified
candidate division CPR3 bacterium RIFOXYA2_FULL_35_13 [MESX]
51307
51380
+
Arg
TCT
[ENA]
¡û
>W1711395270
MESY01000015
Unclassified
candidate division CPR3 bacterium RIFOXYB2_FULL_35_8 [MESY]
5660
5733
+
Arg
TCT
[ENA]
¡û
>W1711395317
MESZ01000134
Unclassified
candidate division CPR3 bacterium RIFOXYC2_FULL_35_7 [MESZ]
3121
3194
+
Arg
TCT
[ENA]
¡û
>W1511597751
LBQB01000001
Unclassified
candidate division CPR3 bacterium GW2011_GWF2_35_18 [LBQB]
9043
8970
-
Arg
TCT
[ENA]
¡û
>W1511598347
LBQV01000036
Unclassified
candidate division CPR3 bacterium GW2011_GWE2_35_7 [LBQV]
32
105
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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