This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.164615 (5 seq.)
>W1711400665
MFIT01000036
Unclassified
Candidatus Giovannonibacteria bacterium RIFOXYC1_FULL_48_8 [MFIT]
27630
27705
+
Glu
TTC
[ENA]
¡û
>W1711400682
MFIU01000001
Unclassified
Candidatus Giovannonibacteria bacterium RIFOXYD1_FULL_48_21 [MFIU]
32066
32141
+
Glu
TTC
[ENA]
¡û
>W1910707333
MFHG01000005
Unclassified
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_48_47 [MFHG]
5129
5204
+
Glu
TTC
[ENA]
¡û
>W1910707716
MFHR01000014
Unclassified
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_48_15 [MFHR]
5109
5184
+
Glu
TTC
[ENA]
¡û
>W1910708207
MFIG01000024
Unclassified
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_48_47 [MFIG]
12979
12904
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK