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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.165659 (7 seq.)
>W1930017238
MHVL01000026
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_38_10.5 [MHVL]
14488
14565
+
Phe
GAA
[ENA]
¡û
>W1930017276
MHVQ01000049
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_82 [MHVQ]
90
13
-
Phe
GAA
[ENA]
¡û
>W1930017305
MHVU01000045
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_38_37 [MHVU]
18327
18250
-
Phe
GAA
[ENA]
¡û
>W1930017420
MHWK01000025
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_39_10 [MHWK]
49810
49887
+
Phe
GAA
[ENA]
¡û
>W1930017451
MHWO01000035
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_39_69 [MHWO]
2913
2836
-
Phe
GAA
[ENA]
¡û
>W1930017468
MHWR01000027
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_39_8 [MHWR]
15651
15728
+
Phe
GAA
[ENA]
¡û
>W1930017490
MHWU01000037
Unclassified
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_FULL_39_45 [MHWU]
3455
3378
-
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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