tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.166353 (88 seq.)
>W1710856904 LLZS01000007 Alphaproteobacteria Novosphingobium fuchskuhlense [LLZS] 556014 556090 + Arg ACG [ENA] ¡û
>W1711294786 MABH01000225 Alphaproteobacteria Cereibacter johrii [MABH] 17164 17088 - Arg ACG [ENA] ¡û
>W1711386337 MEFF01000034 Alphaproteobacteria Sphingobium sp. SCN 64-10 [MEFF] 5140 5216 + Arg ACG [ENA] ¡û
>W1711434801 MINO01000004 Alphaproteobacteria Sphingobium phenoxybenzoativorans [MINO] 146918 146842 - Arg ACG [ENA] ¡û
>W1712076959 NGUN01000003 Alphaproteobacteria Sphingobium sp. GW456-12-10-14-TSB1 [NGUN] 1080302 1080378 + Arg ACG [ENA] ¡û
>W1712076960 NGUN01000003 Alphaproteobacteria Sphingobium sp. GW456-12-10-14-TSB1 [NGUN] 1080435 1080511 + Arg ACG [ENA] ¡û
>W1712105756 NISJ01000001 Alphaproteobacteria Sphingopyxis witflariensis [NISJ] 827705 827629 - Arg ACG [ENA] ¡û
>W1712105819 NISK01000002 Alphaproteobacteria Sphingopyxis bauzanensis [NISK] 155132 155056 - Arg ACG [ENA] ¡û
>C171030399 CP014168 Alphaproteobacteria Sphingomonas panacis DCY99 [CP014168] 4541146 4541070 - Arg ACG - ¡û
>W131216077 ATVN01000016 Alphaproteobacteria Pseudorhodobacter ferrugineus DSM 5888 [ATVN] 32146 32222 + Arg ACG [ENA] ¡û
>W131241114 BARE01000007 Alphaproteobacteria Sphingobium xenophagum NBRC 107872 [BARE] 93864 93940 + Arg ACG [ENA] ¡û
>W131241115 BARE01000007 Alphaproteobacteria Sphingobium xenophagum NBRC 107872 [BARE] 93997 94073 + Arg ACG [ENA] ¡û
>W131160333 AQWM01000003 Alphaproteobacteria Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 [AQWM] 3186 3110 - Arg ACG [ENA] ¡û
>C019227 CP000143 Alphaproteobacteria Cereibacter sphaeroides 2.4.1 [CP000143, CP000144] 2813748 2813672 - Arg ACG [Ensembl] ¡û
>C019750 CP000356 Alphaproteobacteria Sphingopyxis alaskensis RB2256 [CP000356] 1688635 1688559 - Arg ACG [Ensembl] ¡û
>WENV180016333 FSUR01000195 [FSUR] metagenome; soil 15649 15573 - Arg ACG [ENA] ¢þ
>WENV180016553 FSVH01000146 [FSVH] metagenome; soil 83913 83837 - Arg ACG [ENA] ¢þ
>WENV180018590 FSZW01000037 [FSZW] metagenome; soil 78 2 - Arg ACG [ENA] ¢þ
>WENV180020596 FTCZ01006922 [FTCZ] metagenome; soil 58356 58280 - Arg ACG [ENA] ¢þ
>WENV180020660 FTCZ01007966 [FTCZ] metagenome; soil 8041 8117 + Arg ACG [ENA] ¢þ
>WENV180020768 FTDB01001298 [FTDB] metagenome; soil 11073 11149 + Arg ACG [ENA] ¢þ
>WENV180020806 FTDB01002169 [FTDB] metagenome; soil 18822 18898 + Arg ACG [ENA] ¢þ
>WENV180020855 FTDC01000230 [FTDC] metagenome; soil 14439 14363 - Arg ACG [ENA] ¢þ
>WENV180021009 FTDJ01000946 [FTDJ] metagenome; soil 2433 2509 + Arg ACG [ENA] ¢þ
>WENV180025834 FTIQ01237699 [FTIQ] metagenome; soil 156 80 - Arg ACG [ENA] ¢þ
>WENV180027130 FTIW01181659 [FTIW] metagenome; soil 79 155 + Arg ACG [ENA] ¢þ
>WENV180027532 FTIZ01002870 [FTIZ] metagenome; soil 21655 21731 + Arg ACG [ENA] ¢þ
>WENV180027596 FTIZ01006000 [FTIZ] metagenome; soil 1641 1717 + Arg ACG [ENA] ¢þ
>WENV180027639 FTIZ01014021 [FTIZ] metagenome; soil 1 77 + Arg ACG [ENA] ¢þ
>WENV180027760 FTIZ01066443 [FTIZ] metagenome; soil 435 511 + Arg ACG [ENA] ¢þ
>WENV180027998 FTIZ01463154 [FTIZ] metagenome; soil 998 922 - Arg ACG [ENA] ¢þ
>WENV180028773 FTJH01000024 [FTJH] metagenome; soil 77 1 - Arg ACG [ENA] ¢þ
>WENV180028998 FTJI01001737 [FTJI] metagenome; soil 2621 2545 - Arg ACG [ENA] ¢þ
>WENV180033205 FTKF01040973 [FTKF] metagenome; soil 1044 968 - Arg ACG [ENA] ¢þ
>WENV180033247 FTKF01127563 [FTKF] metagenome; soil 77 1 - Arg ACG [ENA] ¢þ
>WENV180033933 FTKM01001950 [FTKM] metagenome; soil 290166 290090 - Arg ACG [ENA] ¢þ
>WENV180034522 FTKR01001742 [FTKR] metagenome; soil 2621 2545 - Arg ACG [ENA] ¢þ
>WENV180035238 FTKT01021175 [FTKT] metagenome; soil 709 633 - Arg ACG [ENA] ¢þ
>WENV180036173 FTLB01533843 [FTLB] metagenome; soil 1447 1523 + Arg ACG [ENA] ¢þ
>WENV181226742 OFDN01000032 [OFDN] hot springs metagenome; Water 137742 137818 + Arg ACG [ENA] ¢þ
>W141136686 AWGB01000017 Alphaproteobacteria Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 [AWGB] 914 838 - Arg ACG [ENA] ¡û
>W141136746 AWGC01000049 Alphaproteobacteria Asticcacaulis sp. AC402 [AWGC] 8256 8180 - Arg ACG [ENA] ¡û
>W141136768 AWGD01000019 Alphaproteobacteria Asticcacaulis sp. AC460 [AWGD] 120402 120478 + Arg ACG [ENA] ¡û
>W141136803 AWGE01000001 Alphaproteobacteria Asticcacaulis sp. AC466 [AWGE] 805314 805390 + Arg ACG [ENA] ¡û
>WENV181401193 OFSF01077474 [OFSF] wastewater metagenome; Exp Tend VB 100WW 258 334 + Arg ACG [ENA] ¢þ
>W141191356 AYOY01000173 Alphaproteobacteria Sphingobium sp. C100 [AYOY] 23351 23275 - Arg ACG [ENA] ¡û
>W141191357 AYOY01000173 Alphaproteobacteria Sphingobium sp. C100 [AYOY] 23221 23145 - Arg ACG [ENA] ¡û
>WENV183696985 OUNJ010000080 [OUNJ] metagenome; soil 35273 35349 + Arg ACG [ENA] ¢þ
>WENV183697190 OUNJ010051748 [OUNJ] metagenome; soil 432 508 + Arg ACG [ENA] ¢þ
>WENV183697207 OUNJ010075373 [OUNJ] metagenome; soil 59 135 + Arg ACG [ENA] ¢þ
>WENV183728214 PJTQ01000001 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 26075 25999 - Arg ACG [ENA] ¢þ
>WENV183739714 PJUF01000001 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 26075 25999 - Arg ACG [ENA] ¢þ
>WENV170136369 CENV01027427 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2608 2684 + Arg ACG [ENA] ¢þ
>WENV170136370 CENV01027427 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2741 2817 + Arg ACG [ENA] ¢þ
>WENV170705220 LLEQ01000375 [LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 682 758 + Arg ACG [ENA] ¢þ
>WENV170961841 MLJW01002459 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 941 865 - Arg ACG [ENA] ¢þ
>WENV170974226 MTKY01055930 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1173 1249 + Arg ACG [ENA] ¢þ
>W141485051 JFZB01000059 Alphaproteobacteria Paenirhodobacter enshiensis [JFZB] 13122 13198 + Arg ACG [ENA] ¡û
>C181056230 CP022048 Alphaproteobacteria Brevundimonas vesicularis FDAARGOS_289 [CP022048] 1864220 1864296 + Arg ACG - ¡û
>C181072099 CP022745 Alphaproteobacteria Sphingobium xenophagum C1 [CP022745, CP022746] 2598725 2598801 + Arg ACG - ¡û
>C181072100 CP022745 Alphaproteobacteria Sphingobium xenophagum C1 [CP022745, CP022746] 2598858 2598934 + Arg ACG - ¡û
>C181084420 CP023548 Alphaproteobacteria Rhodobacter sp. CZR27 [CP023548] 2900907 2900831 - Arg ACG - ¡û
>C191173500 CP039964 Alphaproteobacteria Pseudorhodobacter turbinis S12M18 [CP039964] 1123741 1123665 - Arg ACG - ¡û
>W1910007001 BBQY01000014 Alphaproteobacteria Sphingobium xenophagum OW59 [BBQY] 66158 66234 + Arg ACG [ENA] ¡û
>W1910007002 BBQY01000014 Alphaproteobacteria Sphingobium xenophagum OW59 [BBQY] 66291 66367 + Arg ACG [ENA] ¡û
>C09109065 CP001150 Alphaproteobacteria Cereibacter sphaeroides KD131 KD131; KCTC 12085 [CP001150, CP001151] 2487128 2487052 - Arg ACG [Ensembl] ¡û
>W1910548863 FZOV01000002 Alphaproteobacteria Cereibacter sphaeroides DSM 18937 [FZOV] 487003 486927 - Arg ACG [ENA] ¡û
>W1810005696 BFBR01000007 Alphaproteobacteria Candidatus Phycosocius bacilliformis bacilliformis BOTRYCO-2 [BFBR] 60892 60816 - Arg ACG [ENA] ¡û
>W1810400862 PYGL01000003 Alphaproteobacteria Sphingobium sp. AEW4 [PYGL] 299689 299613 - Arg ACG [ENA] ¡û
>W1810477353 QAOT01000001 Alphaproteobacteria Cereibacter azotoformans KA25 [QAOT] 216852 216928 + Arg ACG [ENA] ¡û
>W1810721636 QNSD01000013 Alphaproteobacteria Rhodobacter sp. 140A [QNSD] 64172 64096 - Arg ACG [ENA] ¡û
>W1511390138 JSXI01000022 Alphaproteobacteria Sphingomonas sp. ERG5 [JSXI] 49302 49378 + Arg ACG [ENA] ¡û
>W11123375 ADUH01000095 Alphaproteobacteria Asticcacaulis biprosthecium C19 [ADUH] 44486 44562 + Arg ACG [ENA] ¡û
>W1511698355 LGHS01000007 Alphaproteobacteria Pseudorhodobacter aquimaris KCTC 23043 [LGHS] 5211 5135 - Arg ACG [ENA] ¡û
>W1511698425 LGHT01000042 Alphaproteobacteria Pseudorhodobacter wandonensis KCTC 23672 [LGHT] 112308 112232 - Arg ACG [ENA] ¡û
>W1511698463 LGHU01000081 Alphaproteobacteria Pseudorhodobacter antarcticus KCTC 23700 [LGHU] 12543 12619 + Arg ACG [ENA] ¡û
>W1511698510 LGHV01000046 Alphaproteobacteria Pseudorhodobacter ferrugineus LMG 22047 [LGHV] 32292 32368 + Arg ACG [ENA] ¡û
>W121084332 AKIB01000042 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 15582 15506 - Arg ACG [ENA] ¡û
>W121084333 AKIB01000042 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 15449 15373 - Arg ACG [ENA] ¡û
>W1610719285 LLZS01000007 Alphaproteobacteria Novosphingobium fuchskuhlense [LLZS] 556014 556090 + Arg ACG [ENA] ¡û
>W1710084629 BDMM01000004 Alphaproteobacteria Brevundimonas sp. SH203 [BDMM] 304619 304543 - Arg ACG [ENA] ¡û
>W1710505463 FMTS01000001 Alphaproteobacteria Asticcacaulis taihuensis [FMTS] 1116036 1115960 - Arg ACG [ENA] ¡û
>W1710505619 FMTU01000020 Alphaproteobacteria Sphingobium faniae [FMTU] 23903 23979 + Arg ACG [ENA] ¡û
>W1710509098 FMWX01000001 Alphaproteobacteria Sphingomonas sp. NFR15 [FMWX] 512938 512862 - Arg ACG [ENA] ¡û
>W1710546957 FOCO01000010 Alphaproteobacteria Pseudorhodobacter antarcticus [FOCO] 45399 45475 + Arg ACG [ENA] ¡û
>W1710551556 FOGE01000002 Alphaproteobacteria Sphingobium sp. YR768 [FOGE] 138814 138890 + Arg ACG [ENA] ¡û
>W1710551557 FOGE01000002 Alphaproteobacteria Sphingobium sp. YR768 [FOGE] 138945 139021 + Arg ACG [ENA] ¡û
>W1710551558 FOGE01000002 Alphaproteobacteria Sphingobium sp. YR768 [FOGE] 139076 139152 + Arg ACG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK