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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.173644 (10 seq.)
>W1911240046
NSED01000389
Gammaproteobacteria
Escherichia coli JEONG-5084 [NSED]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240129
NSEE01000302
Gammaproteobacteria
Escherichia coli JEONG-5114 [NSEE]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240213
NSEF01000630
Gammaproteobacteria
Escherichia coli JEONG-5120 [NSEF]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240283
NSEG01000363
Gammaproteobacteria
Escherichia coli JEONG-5232 [NSEG]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240371
NSEH01000435
Gammaproteobacteria
Escherichia coli JEONG-5250 [NSEH]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240387
NSEI01000135
Gammaproteobacteria
Escherichia coli JEONG-5298 [NSEI]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240721
NSEL01000300
Gammaproteobacteria
Escherichia coli JEONG-5453 [NSEL]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240766
NSEM01000156
Gammaproteobacteria
Escherichia coli JEONG-5507 [NSEM]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911240875
NSEN01000261
Gammaproteobacteria
Escherichia coli JEONG-5511 [NSEN]
1613
1689
+
Met
CAT
[ENA]
¡û
>W1911241062
NSEP01000376
Gammaproteobacteria
Escherichia coli JEONG-5650 [NSEP]
2000
2076
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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