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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.176032 (24 seq.)
>W1910225558
FMSQ01000019
Campylobacterota
Helicobacter suis HS1 [FMSQ]
136145
136221
+
Met
CAT
[ENA]
¡û
>W1910225599
FMSR01000030
Campylobacterota
Helicobacter suis HS1 [FMSR]
154849
154925
+
Met
CAT
[ENA]
¡û
>W1910225638
FMSS01000035
Campylobacterota
Helicobacter suis HS1 [FMSS]
2750
2674
-
Met
CAT
[ENA]
¡û
>W1910225658
FMST01000004
Campylobacterota
Helicobacter suis HS1 [FMST]
105981
106057
+
Met
CAT
[ENA]
¡û
>W1910225690
FMSU01000001
Campylobacterota
Helicobacter suis HS1 [FMSU]
24825
24901
+
Met
CAT
[ENA]
¡û
>W1910544220
FZKH01000001
Campylobacterota
Helicobacter suis [FZKH]
136350
136426
+
Met
CAT
[ENA]
¡û
>W1910544268
FZKI01000012
Campylobacterota
Helicobacter suis [FZKI]
2785
2709
-
Met
CAT
[ENA]
¡û
>W1910544302
FZKJ01000009
Campylobacterota
Helicobacter suis [FZKJ]
2807
2731
-
Met
CAT
[ENA]
¡û
>W1910544436
FZKN01000010
Campylobacterota
Helicobacter suis [FZKN]
180442
180518
+
Met
CAT
[ENA]
¡û
>W1910544646
FZKT01000001
Campylobacterota
Helicobacter suis [FZKT]
2797
2721
-
Met
CAT
[ENA]
¡û
>W1910544729
FZKV01000018
Campylobacterota
Helicobacter suis [FZKV]
180369
180445
+
Met
CAT
[ENA]
¡û
>W1910545002
FZLD01000008
Campylobacterota
Helicobacter suis [FZLD]
2785
2709
-
Met
CAT
[ENA]
¡û
>W1910545052
FZLE01000042
Campylobacterota
Helicobacter suis [FZLE]
58911
58987
+
Met
CAT
[ENA]
¡û
>W1910545186
FZLI01000004
Campylobacterota
Helicobacter suis [FZLI]
2785
2709
-
Met
CAT
[ENA]
¡û
>W1910545647
FZLU01000025
Campylobacterota
Helicobacter ailurogastricus [FZLU]
15220
15296
+
Met
CAT
[ENA]
¡û
>W1910546103
FZMH01000016
Campylobacterota
Helicobacter ailurogastricus [FZMH]
55520
55596
+
Met
CAT
[ENA]
¡û
>W1510073704
CDMG01000002
Campylobacterota
Helicobacter ailurogastricus [CDMG]
55865
55941
+
Met
CAT
[ENA]
¡û
>W1510073756
CDMH01000037
Campylobacterota
Helicobacter ailurogastricus [CDMH]
21693
21769
+
Met
CAT
[ENA]
¡û
>W1510073895
CDML01000036
Campylobacterota
Helicobacter ailurogastricus [CDML]
61095
61171
+
Met
CAT
[ENA]
¡û
>W1510073962
CDMN01000045
Campylobacterota
Helicobacter ailurogastricus [CDMN]
55677
55753
+
Met
CAT
[ENA]
¡û
>W11117558
ADGY01000059
Campylobacterota
Helicobacter suis HS1 [ADGY]
11757
11681
-
Met
CAT
[ENA]
¡û
>W11117909
ADHO01000219
Campylobacterota
Helicobacter suis HS5 [ADHO]
2324
2248
-
Met
CAT
[ENA]
¡û
>W1610077979
BDAO01000002
Campylobacterota
Helicobacter suis [BDAO]
2816
2740
-
Met
CAT
[ENA]
¡û
>W1710076538
BDAO01000002
Campylobacterota
Helicobacter suis [BDAO]
2816
2740
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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