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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.176154 (6 seq.)
>WENV180044439
MOXG01001090
[MOXG] mollusc metagenome; Phylotype C (NB3); bacterial symbionts from gill
482
406
-
Arg
TCT
[ENA]
¢þ
>C191131973
CP034810
Alphaproteobacteria
Paracoccus sp. Arc7-R13 [CP034810]
2765777
2765853
+
Arg
TCT
-
¡û
>C191159587
CP038439
Alphaproteobacteria
Paracoccus liaowanqingii 2251 [CP038439]
2591428
2591352
-
Arg
TCT
-
¡û
>W1510013657
BBPH01000022
Alphaproteobacteria
Paracoccus sp. PAMC 22219 [BBPH]
51090
51166
+
Arg
TCT
[ENA]
¡û
>W1511518698
JXYF01000022
Alphaproteobacteria
Paracoccus sp. S4493 [JXYF]
66349
66425
+
Arg
TCT
[ENA]
¡û
>W1511526804
JYGY01000004
Alphaproteobacteria
Paracoccus sp. 228 361 [JYGY]
197500
197576
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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