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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.176410 (132 seq.)
>W131053426
ANAA01000014
Mycoplasmatota
Mycoplasmoides pneumoniae PO1 [ANAA]
9397
9321
-
Arg
TCG
[ENA]
¡û
>W131053458
ANAB01000088
Mycoplasmatota
Mycoplasmoides pneumoniae PI 1428 [ANAB]
9213
9137
-
Arg
TCG
[ENA]
¡û
>W131061402
ANIQ01000072
Mycoplasmatota
Mycoplasmoides pneumoniae 19294 [ANIQ]
9177
9101
-
Arg
TCG
[ENA]
¡û
>C171060857
CP017327
Mycoplasmatota
Mycoplasmoides pneumoniae FH 2009 [CP017327]
451707
451631
-
Arg
TCG
-
¡û
>C171060890
CP017328
Mycoplasmatota
Mycoplasmoides pneumoniae 685 [CP017328]
453215
453139
-
Arg
TCG
-
¡û
>C171060923
CP017329
Mycoplasmatota
Mycoplasmoides pneumoniae E57 [CP017329]
451605
451529
-
Arg
TCG
-
¡û
>C171060956
CP017330
Mycoplasmatota
Mycoplasmoides pneumoniae 549 [CP017330]
453430
453354
-
Arg
TCG
-
¡û
>C171060989
CP017331
Mycoplasmatota
Mycoplasmoides pneumoniae FL8 [CP017331]
453397
453321
-
Arg
TCG
-
¡û
>C171061022
CP017332
Mycoplasmatota
Mycoplasmoides pneumoniae E16 [CP017332]
453358
453282
-
Arg
TCG
-
¡û
>C171061054
CP017333
Mycoplasmatota
Mycoplasmoides pneumoniae FL1 [CP017333]
453489
453413
-
Arg
TCG
-
¡û
>C171061087
CP017334
Mycoplasmatota
Mycoplasmoides pneumoniae K27 [CP017334]
451455
451379
-
Arg
TCG
-
¡û
>C171061120
CP017335
Mycoplasmatota
Mycoplasmoides pneumoniae CO103 [CP017335]
451609
451533
-
Arg
TCG
-
¡û
>C171061153
CP017336
Mycoplasmatota
Mycoplasmoides pneumoniae GA3 [CP017336]
451689
451613
-
Arg
TCG
-
¡û
>C171061186
CP017337
Mycoplasmatota
Mycoplasmoides pneumoniae 1006 [CP017337]
451671
451595
-
Arg
TCG
-
¡û
>C171061219
CP017338
Mycoplasmatota
Mycoplasmoides pneumoniae 1134 [CP017338]
451591
451515
-
Arg
TCG
-
¡û
>C171061252
CP017339
Mycoplasmatota
Mycoplasmoides pneumoniae 519 [CP017339]
451734
451658
-
Arg
TCG
-
¡û
>C171061285
CP017340
Mycoplasmatota
Mycoplasmoides pneumoniae RI3 [CP017340]
451797
451721
-
Arg
TCG
-
¡û
>C171061318
CP017341
Mycoplasmatota
Mycoplasmoides pneumoniae 1801 [CP017341]
451650
451574
-
Arg
TCG
-
¡û
>C171061351
CP017342
Mycoplasmatota
Mycoplasmoides pneumoniae CO3 [CP017342]
451776
451700
-
Arg
TCG
-
¡û
>C171061384
CP017343
Mycoplasmatota
Mycoplasmoides pneumoniae M129 2002 [CP017343]
453469
453393
-
Arg
TCG
-
¡û
>C171111156
CP020689
Mycoplasmatota
Mycoplasmoides pneumoniae S63-tet-R [CP020689]
453383
453307
-
Arg
TCG
-
¡û
>C171111189
CP020690
Mycoplasmatota
Mycoplasmoides pneumoniae FH-tet-R [CP020690]
453326
453250
-
Arg
TCG
-
¡û
>C171111222
CP020691
Mycoplasmatota
Mycoplasmoides pneumoniae S68-tet-R [CP020691]
453356
453280
-
Arg
TCG
-
¡û
>C171111255
CP020692
Mycoplasmatota
Mycoplasmoides pneumoniae S55-tet-R [CP020692]
452910
452834
-
Arg
TCG
-
¡û
>C171111288
CP020693
Mycoplasmatota
Mycoplasmoides pneumoniae S91-tet-R [CP020693]
453377
453301
-
Arg
TCG
-
¡û
>C171111499
CP020710
Mycoplasmatota
Mycoplasmoides pneumoniae S34-tet-R [CP020710]
453381
453305
-
Arg
TCG
-
¡û
>C171111532
CP020711
Mycoplasmatota
Mycoplasmoides pneumoniae S4-tet-R [CP020711]
453381
453305
-
Arg
TCG
-
¡û
>C171111565
CP020712
Mycoplasmatota
Mycoplasmoides pneumoniae S12-tet-R [CP020712]
453378
453302
-
Arg
TCG
-
¡û
>C013498
L43967
Mycoplasmatota
Mycoplasmoides genitalium G37 G-37 [L43967]
315377
315301
-
Arg
TCG
[Ensembl]
¡û
>C013978
U00089
Mycoplasmatota
Mycoplasmoides pneumoniae M129 M129; ATCC 29342 [U00089]
453336
453260
-
Arg
TCG
[Ensembl]
¡û
>w005789
AAGX01000009
Mycoplasmatota
Mycoplasmoides genitalium G-37 [AAGX]
660
582
-
Arg
TCG
[ENA]
¡û
>C181001496
AP017318
Mycoplasmatota
Mycoplasmoides pneumoniae KCH-402 [AP017318]
451553
451477
-
Arg
TCG
-
¡û
>C181001529
AP017319
Mycoplasmatota
Mycoplasmoides pneumoniae KCH-405 [AP017319]
451597
451521
-
Arg
TCG
-
¡û
>C191218055
LR214945
Mycoplasmatota
Mycoplasmoides pneumoniae NCTC10119 [LR214945]
363924
364000
+
Arg
TCG
-
¡û
>W1910750705
MJIT01000001
Mycoplasmatota
Mycoplasmoides pneumoniae CO36 [MJIT]
686868
686792
-
Arg
TCG
[ENA]
¡û
>W1910750751
MJIU01000003
Mycoplasmatota
Mycoplasmoides pneumoniae 682 [MJIU]
81937
81861
-
Arg
TCG
[ENA]
¡û
>W1910750783
MJIV01000001
Mycoplasmatota
Mycoplasmoides pneumoniae 1005 [MJIV]
322612
322536
-
Arg
TCG
[ENA]
¡û
>W1910750811
MJIW01000004
Mycoplasmatota
Mycoplasmoides pneumoniae 303 [MJIW]
396053
395977
-
Arg
TCG
[ENA]
¡û
>W1910750848
MJIX01000003
Mycoplasmatota
Mycoplasmoides pneumoniae G6 [MJIX]
13312
13236
-
Arg
TCG
[ENA]
¡û
>W1910750883
MJIY01000002
Mycoplasmatota
Mycoplasmoides pneumoniae K21 [MJIY]
252928
252852
-
Arg
TCG
[ENA]
¡û
>W1910750901
MJIZ01000001
Mycoplasmatota
Mycoplasmoides pneumoniae 986 [MJIZ]
43606
43530
-
Arg
TCG
[ENA]
¡û
>W1910750923
MJJA01000001
Mycoplasmatota
Mycoplasmoides pneumoniae FH 1965 [MJJA]
63325
63401
+
Arg
TCG
[ENA]
¡û
>C151039367
CP008895
Mycoplasmatota
Mycoplasmoides pneumoniae M29 [CP008895]
530712
530636
-
Arg
TCG
-
¡û
>C151070716
CP010538
Mycoplasmatota
Mycoplasmoides pneumoniae PI 1428 [CP010538]
453383
453307
-
Arg
TCG
-
¡û
>C151070741
CP010539
Mycoplasmatota
Mycoplasmoides pneumoniae 19294 [CP010539]
772928
772852
-
Arg
TCG
-
¡û
>C151070782
CP010540
Mycoplasmatota
Mycoplasmoides pneumoniae 39443 [CP010540]
451664
451588
-
Arg
TCG
-
¡û
>C151070815
CP010541
Mycoplasmatota
Mycoplasmoides pneumoniae 51494 [CP010541]
453301
453225
-
Arg
TCG
-
¡û
>C151070848
CP010542
Mycoplasmatota
Mycoplasmoides pneumoniae 54089 [CP010542]
453466
453390
-
Arg
TCG
-
¡û
>C151070881
CP010543
Mycoplasmatota
Mycoplasmoides pneumoniae 54524 [CP010543]
453472
453396
-
Arg
TCG
-
¡û
>C151070914
CP010544
Mycoplasmatota
Mycoplasmoides pneumoniae 85084 [CP010544]
453305
453229
-
Arg
TCG
-
¡û
>C151070947
CP010545
Mycoplasmatota
Mycoplasmoides pneumoniae 85138 [CP010545]
453281
453205
-
Arg
TCG
-
¡û
>C151070980
CP010546
Mycoplasmatota
Mycoplasmoides pneumoniae FH [CP010546]
451637
451561
-
Arg
TCG
-
¡û
>C151071013
CP010547
Mycoplasmatota
Mycoplasmoides pneumoniae M1139 [CP010547]
451501
451425
-
Arg
TCG
-
¡û
>C151071046
CP010548
Mycoplasmatota
Mycoplasmoides pneumoniae M2192 [CP010548]
451594
451518
-
Arg
TCG
-
¡û
>C151071079
CP010549
Mycoplasmatota
Mycoplasmoides pneumoniae M2592 [CP010549]
451670
451594
-
Arg
TCG
-
¡û
>C151071112
CP010550
Mycoplasmatota
Mycoplasmoides pneumoniae MAC Mac [CP010550]
451611
451535
-
Arg
TCG
-
¡û
>C151071145
CP010551
Mycoplasmatota
Mycoplasmoides pneumoniae PO1 [CP010551]
451647
451571
-
Arg
TCG
-
¡û
>C10109521
CP002077
Mycoplasmatota
Mycoplasmoides pneumoniae FH [CP002077]
451480
451404
-
Arg
TCG
[Ensembl]
¡û
>C121001020
AP012303
Mycoplasmatota
Mycoplasmoides pneumoniae 309 [AP012303]
451690
451614
-
Arg
TCG
[Ensembl]
¡û
>C121015605
CP003770
Mycoplasmatota
Mycoplasmoides genitalium M2321 [CP003770]
315302
315226
-
Arg
TCG
[Ensembl]
¡û
>C121015638
CP003771
Mycoplasmatota
Mycoplasmoides genitalium M6282 [CP003771]
314887
314811
-
Arg
TCG
[Ensembl]
¡û
>C121015671
CP003772
Mycoplasmatota
Mycoplasmoides genitalium M6320 [CP003772]
315166
315090
-
Arg
TCG
[Ensembl]
¡û
>C121015704
CP003773
Mycoplasmatota
Mycoplasmoides genitalium M2288 [CP003773]
315082
315006
-
Arg
TCG
[Ensembl]
¡û
>C161060844
CP013829
Mycoplasmatota
Mycoplasmoides pneumoniae S355 [CP013829]
438146
438070
-
Arg
TCG
-
¡û
>C161069945
CP014267
Mycoplasmatota
Mycoplasmoides pneumoniae C267 [CP014267]
453422
453346
-
Arg
TCG
-
¡û
>C131009696
CP003913
Mycoplasmatota
Mycoplasmoides pneumoniae M129-B7 [CP003913]
453314
453238
-
Arg
TCG
[Ensembl]
¡û
>W1610542845
JTGU01000025
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGU]
17297
17221
-
Arg
TCG
[ENA]
¡û
>W1610542885
JTGV01000025
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGV]
42458
42534
+
Arg
TCG
[ENA]
¡û
>W1610542911
JTGW01000022
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGW]
9252
9176
-
Arg
TCG
[ENA]
¡û
>W1610542952
JTGX01000063
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGX]
39487
39563
+
Arg
TCG
[ENA]
¡û
>W1610542978
JTGY01000015
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGY]
43827
43903
+
Arg
TCG
[ENA]
¡û
>W1610543012
JTGZ01000013
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGZ]
9234
9158
-
Arg
TCG
[ENA]
¡û
>W1610543044
JTHA01000013
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHA]
43827
43903
+
Arg
TCG
[ENA]
¡û
>W1610543077
JTHB01000015
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHB]
43537
43613
+
Arg
TCG
[ENA]
¡û
>W1610543110
JTHC01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHC]
43831
43907
+
Arg
TCG
[ENA]
¡û
>W1610543143
JTHD01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHD]
43537
43613
+
Arg
TCG
[ENA]
¡û
>W1610620910
LHPO01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPO]
44256
44332
+
Arg
TCG
[ENA]
¡û
>W1610620943
LHPP01000003
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPP]
44174
44250
+
Arg
TCG
[ENA]
¡û
>W1610620977
LHPQ01000007
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPQ]
9760
9684
-
Arg
TCG
[ENA]
¡û
>W1610621008
LHPR01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPR]
44230
44306
+
Arg
TCG
[ENA]
¡û
>W1610621064
LHPS01000017
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPS]
44208
44284
+
Arg
TCG
[ENA]
¡û
>W1610621091
LHPT01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPT]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1610621105
LHPU01000004
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPU]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1610621136
LHPV01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPV]
44237
44313
+
Arg
TCG
[ENA]
¡û
>W1610621168
LHPW01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPW]
44231
44307
+
Arg
TCG
[ENA]
¡û
>W1610621209
LHPX01000008
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPX]
9715
9639
-
Arg
TCG
[ENA]
¡û
>W1610621233
LHPY01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPY]
44211
44287
+
Arg
TCG
[ENA]
¡û
>W1610621265
LHPZ01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPZ]
44228
44304
+
Arg
TCG
[ENA]
¡û
>W1610621298
LHQA01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQA]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1610621329
LHQB01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQB]
44233
44309
+
Arg
TCG
[ENA]
¡û
>W1610621362
LHQC01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQC]
9731
9655
-
Arg
TCG
[ENA]
¡û
>W1610621411
LHQD01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQD]
45379
45455
+
Arg
TCG
[ENA]
¡û
>W1610621427
LHQE01000005
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQE]
44286
44362
+
Arg
TCG
[ENA]
¡û
>W1610621474
LHQF01000013
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQF]
44240
44316
+
Arg
TCG
[ENA]
¡û
>W1610621492
LHQG01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQG]
9722
9646
-
Arg
TCG
[ENA]
¡û
>W1610621523
LHQH01000005
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQH]
44291
44367
+
Arg
TCG
[ENA]
¡û
>W1610621555
LHQI01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQI]
44227
44303
+
Arg
TCG
[ENA]
¡û
>W1610621613
LHQJ01000014
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQJ]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1610621620
LHQK01000004
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQK]
44263
44339
+
Arg
TCG
[ENA]
¡û
>W1710645976
JTGU01000025
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGU]
17297
17221
-
Arg
TCG
[ENA]
¡û
>W1710646016
JTGV01000025
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGV]
42458
42534
+
Arg
TCG
[ENA]
¡û
>W1710646042
JTGW01000022
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGW]
9252
9176
-
Arg
TCG
[ENA]
¡û
>W1710646083
JTGX01000063
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGX]
39487
39563
+
Arg
TCG
[ENA]
¡û
>W1710646109
JTGY01000015
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGY]
43827
43903
+
Arg
TCG
[ENA]
¡û
>W1710646143
JTGZ01000013
Mycoplasmatota
Mycoplasmoides pneumoniae [JTGZ]
9234
9158
-
Arg
TCG
[ENA]
¡û
>W1710646175
JTHA01000013
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHA]
43827
43903
+
Arg
TCG
[ENA]
¡û
>W1710646208
JTHB01000015
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHB]
43537
43613
+
Arg
TCG
[ENA]
¡û
>W1710646241
JTHC01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHC]
43831
43907
+
Arg
TCG
[ENA]
¡û
>W1710646274
JTHD01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [JTHD]
43537
43613
+
Arg
TCG
[ENA]
¡û
>W1710748777
LHPO01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPO]
44256
44332
+
Arg
TCG
[ENA]
¡û
>W1710748810
LHPP01000003
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPP]
44174
44250
+
Arg
TCG
[ENA]
¡û
>W1710748844
LHPQ01000007
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPQ]
9760
9684
-
Arg
TCG
[ENA]
¡û
>W1710748875
LHPR01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPR]
44230
44306
+
Arg
TCG
[ENA]
¡û
>W1710748931
LHPS01000017
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPS]
44208
44284
+
Arg
TCG
[ENA]
¡û
>W1710748958
LHPT01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPT]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1710748972
LHPU01000004
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPU]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1710749003
LHPV01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPV]
44237
44313
+
Arg
TCG
[ENA]
¡û
>W1710749035
LHPW01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPW]
44231
44307
+
Arg
TCG
[ENA]
¡û
>W1710749076
LHPX01000008
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPX]
9715
9639
-
Arg
TCG
[ENA]
¡û
>W1710749100
LHPY01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPY]
44211
44287
+
Arg
TCG
[ENA]
¡û
>W1710749132
LHPZ01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHPZ]
44228
44304
+
Arg
TCG
[ENA]
¡û
>W1710749165
LHQA01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQA]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1710749196
LHQB01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQB]
44233
44309
+
Arg
TCG
[ENA]
¡û
>W1710749229
LHQC01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQC]
9731
9655
-
Arg
TCG
[ENA]
¡û
>W1710749278
LHQD01000012
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQD]
45379
45455
+
Arg
TCG
[ENA]
¡û
>W1710749294
LHQE01000005
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQE]
44286
44362
+
Arg
TCG
[ENA]
¡û
>W1710749341
LHQF01000013
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQF]
44240
44316
+
Arg
TCG
[ENA]
¡û
>W1710749359
LHQG01000002
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQG]
9722
9646
-
Arg
TCG
[ENA]
¡û
>W1710749390
LHQH01000005
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQH]
44291
44367
+
Arg
TCG
[ENA]
¡û
>W1710749422
LHQI01000001
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQI]
44227
44303
+
Arg
TCG
[ENA]
¡û
>W1710749480
LHQJ01000014
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQJ]
9776
9700
-
Arg
TCG
[ENA]
¡û
>W1710749487
LHQK01000004
Mycoplasmatota
Mycoplasmoides pneumoniae [LHQK]
44263
44339
+
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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