tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.178168 (100 seq.)
>W1710986643 LPUF01000002 Gammaproteobacteria Methyloprofundus sedimenti [LPUF] 98973 98897 - Arg ACG [ENA] ¡û
>W1711129640 LUUF01000003 Gammaproteobacteria Methylomonas methanica [LUUF] 10693 10617 - Arg ACG [ENA] ¡û
>W1711129704 LUUG01000087 Gammaproteobacteria Methylomonas methanica [LUUG] 15359 15435 + Arg ACG [ENA] ¡û
>W1711129734 LUUH01000046 Gammaproteobacteria Methylomonas methanica [LUUH] 17971 18047 + Arg ACG [ENA] ¡û
>W1711129798 LUUI01000163 Gammaproteobacteria Methylomonas lenta [LUUI] 13748 13672 - Arg ACG [ENA] ¡û
>W1711129845 LUUJ01000134 Gammaproteobacteria Methylomonas koyamae [LUUJ] 134670 134746 + Arg ACG [ENA] ¡û
>W1711129876 LUUK01000177 Gammaproteobacteria Methylomonas koyamae [LUUK] 47990 48066 + Arg ACG [ENA] ¡û
>W1711129908 LUUL01000068 Gammaproteobacteria Methylomonas koyamae [LUUL] 14678 14602 - Arg ACG [ENA] ¡û
>W1711494873 MKMC01000067 Gammaproteobacteria Methylomonas sp. LWB [MKMC] 3021 2945 - Arg ACG [ENA] ¡û
>W1711632622 MPSY01000081 Gammaproteobacteria Methylococcales bacterium OPU3_GD_OMZ [MPSY] 660 736 + Arg ACG [ENA] ¡û
>W131099655 AOTL01000006 Gammaproteobacteria Methylotuvimicrobium buryatense 5G [AOTL] 367560 367484 - Arg ACG [ENA] ¡û
>W131155758 AQOV01000001 Gammaproteobacteria Methylomonas sp. MK1 [AQOV] 1947374 1947298 - Arg ACG [ENA] ¡û
>W131166862 ARCU01000003 Gammaproteobacteria Methylosarcina fibrata AML-C10 [ARCU] 1038310 1038234 - Arg ACG [ENA] ¡û
>W131186005 ARVS01000001 Gammaproteobacteria Methylobacter marinus A45 [ARVS] 651719 651643 - Arg ACG [ENA] ¡û
>W131219202 ATYJ01000001 Gammaproteobacteria Methylobacter luteus IMV-B-3098 [ATYJ] 720014 720090 + Arg ACG [ENA] ¡û
>W131163536 AQZU01000003 Gammaproteobacteria Methylovulum miyakonense HT12 [AQZU] 145714 145638 - Arg ACG [ENA] ¡û
>WENV180027165 FTIX01000044 [FTIX] metagenome; soil 13868 13944 + Arg TCG [ENA] ¢þ
>WENV180061015 MPLX02201934 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 6700 6776 + Arg ACG [ENA] ¢þ
>WENV180069303 MPLZ02098695 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 1443 1367 - Arg ACG [ENA] ¢þ
>WENV180072829 MPMA02045087 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 178 102 - Arg ACG [ENA] ¢þ
>WENV180081574 MPMC02127651 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 641 565 - Arg ACG [ENA] ¢þ
>WENV180086549 MPMD02482594 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 106364 106440 + Arg ACG [ENA] ¢þ
>WENV180103926 OAPB01027644 [OAPB] marine metagenome; Sterile flask 390 466 + Arg ACG [ENA] ¢þ
>WENV180267857 OBEQ011902595 [OBEQ] groundwater metagenome; groundwater 99 23 - Arg ACG [ENA] ¢þ
>WENV180297185 OBJA01013707 [OBJA] soil metagenome; sediment, water from around vicinity 2349 2425 + Arg ACG [ENA] ¢þ
>WENV180299341 OBJC01001562 [OBJC] metagenome; water 78 154 + Arg ACG [ENA] ¢þ
>WENV180375012 OBOK01070686 [OBOK] marine metagenome; seawater 115 39 - Arg ACG [ENA] ¢þ
>WENV180595767 OCPF01031214 [OCPF] marine metagenome; ENVO.00002150 9 85 + Arg ACG [ENA] ¢þ
>WENV181392366 OFRW01036043 [OFRW] seawater metagenome; seawater 528 452 - Arg ACG [ENA] ¢þ
>W141187106 AYLO01000091 Gammaproteobacteria Methyloglobulus morosus KoM1 [AYLO] 13359 13435 + Arg ACG [ENA] ¡û
>W141219947 AZXK01000002 Gammaproteobacteria Methylomonas sp. 11b [AZXK] 842455 842379 - Arg ACG [ENA] ¡û
>WENV182553516 OJCR01008817 [OJCR] seawater metagenome; Sea water 1473 1397 - Arg ACG [ENA] ¢þ
>WENV182558283 OJDL01031075 [OJDL] seawater metagenome; Sea water 530 606 + Arg ACG [ENA] ¢þ
>WENV183661532 ORJL010116373 [ORJL] groundwater metagenome; groundwater 66397 66473 + Arg ACG [ENA] ¢þ
>WENV183681863 ORMF010366837 [ORMF] groundwater metagenome; groundwater 191 115 - Arg ACG [ENA] ¢þ
>WENV170144348 CENY01145082 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1255 1331 + Arg ACG [ENA] ¢þ
>WENV170173230 CEOQ01190524 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 512 588 + Arg ACG [ENA] ¢þ
>WENV170231425 CEQH01159381 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 193 117 - Arg ACG [ENA] ¢þ
>WENV170270686 CERI01113531 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9543 9619 + Arg ACG [ENA] ¢þ
>WENV170303120 CESH01262195 [CESH] marine metagenome genome assembly TARA_094_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4581 4657 + Arg ACG [ENA] ¢þ
>WENV170330183 CESV01190359 [CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 68 144 + Arg ACG [ENA] ¢þ
>WENV170359200 CETK01260359 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 429 353 - Arg ACG [ENA] ¢þ
>WENV170387144 CETY01336171 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 430 354 - Arg ACG [ENA] ¢þ
>WENV170399918 CEUE01057062 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3427 3351 - Arg ACG [ENA] ¢þ
>WENV170407807 CEUH01227305 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 93 169 + Arg ACG [ENA] ¢þ
>WENV170422479 CEUN01163267 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 51 127 + Arg ACG [ENA] ¢þ
>WENV170456521 CEVA01211167 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 429 353 - Arg ACG [ENA] ¢þ
>WENV170514682 CEWA01116969 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 230 154 - Arg ACG [ENA] ¢þ
>WENV170523941 CEWG01337484 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 631 707 + Arg ACG [ENA] ¢þ
>WENV170535840 CEWP01112650 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 845 769 - Arg ACG [ENA] ¢þ
>WENV170557128 CXWL01019753 [CXWL] groundwater metagenome; biofilm material 1794 1718 - Arg ACG [ENA] ¢þ
>WENV170568441 FLMP01040107 [FLMP] seawater metagenome; seawater 1170 1094 - Arg ACG [ENA] ¢þ
>WENV170577447 FSSH01000017 [FSSH] freshwater metagenome; drinking water 180704 180780 + Arg ACG [ENA] ¢þ
>WENV170602941 FUWD010276015 [FUWD] metagenome; unknown 276 200 - Arg ACG [ENA] ¢þ
>WENV170606797 FUWD010733495 [FUWD] metagenome; unknown 366 290 - Arg ACG [ENA] ¢þ
>WENV170626494 FUWD013223609 [FUWD] metagenome; unknown 514 438 - Arg ACG [ENA] ¢þ
>WENV170663447 JYMV01005704 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 12144 12220 + Arg ACG [ENA] ¢þ
>WENV170664878 JYMV01020564 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 670 746 + Arg ACG [ENA] ¢þ
>WENV170665763 JYMV01030031 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 101617 101541 - Arg ACG [ENA] ¢þ
>WENV170666725 JYMV01040121 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 51102 51026 - Arg ACG [ENA] ¢þ
>WENV170666870 JYMV01041623 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 3442 3518 + Arg ACG [ENA] ¢þ
>WENV170698230 LGVF01291435 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 164 88 - Arg ACG [ENA] ¢þ
>WENV170701261 LKGT01005949 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 471 395 - Arg ACG [ENA] ¢þ
>WENV170763931 LWDU01024916 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 2135 2059 - Arg ACG [ENA] ¢þ
>WENV170766217 LWDU01040999 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 45565 45641 + Arg ACG [ENA] ¢þ
>WENV170766490 LWDU01041787 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 21492 21416 - Arg ACG [ENA] ¢þ
>WENV170766526 LWDU01041943 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 30415 30339 - Arg ACG [ENA] ¢þ
>WENV170843375 MDSZ01259088 [MDSZ] marine metagenome; seawater 4886 4962 + Arg ACG [ENA] ¢þ
>WENV170912144 MDTE01116450 [MDTE] marine metagenome; seawater 2691 2615 - Arg ACG [ENA] ¢þ
>C181059046 CP022129 Gammaproteobacteria Methylovulum psychrotolerans HV10_M2 [CP022129] 1999065 1998989 - Arg ACG - ¡û
>C181088684 CP023669 Gammaproteobacteria Methylomonas koyamae LM6 [CP023669] 3661027 3660951 - Arg ACG - ¡û
>C191027184 CP024202 Gammaproteobacteria Methylomicrobium sp. wino1 [CP024202] 2291678 2291754 + Arg ACG - ¡û
>C191105417 CP033381 Gammaproteobacteria Methylomonas sp. LW13 [CP033381] 1398510 1398586 + Arg ACG - ¡û
>C191143428 CP035467 Gammaproteobacteria Methylotuvimicrobium buryatense 5GB1C [CP035467] 1758770 1758846 + Arg ACG - ¡û
>W141733709 JNLB01000010 Gammaproteobacteria Methylomonas sp. LW13 [JNLB] 163480 163404 - Arg ACG [ENA] ¡û
>W141807403 JPOJ01000001 Gammaproteobacteria Methylomicrobium agile [JPOJ] 2967343 2967267 - Arg ACG [ENA] ¡û
>W141807561 JPON01000001 Gammaproteobacteria Methylomarinum vadi [JPON] 3915974 3916050 + Arg ACG [ENA] ¡û
>W141817436 JQKS01000004 Gammaproteobacteria Methylobacter sp. BBA5.1 [JQKS] 29686 29610 - Arg ACG [ENA] ¡û
>W141821712 JQNS01000005 Gammaproteobacteria Methylobacter whittenburyi [JQNS] 1562475 1562551 + Arg ACG [ENA] ¡û
>W1910228721 FNVW02005046 Gammaproteobacteria methanotrophic bacterial endosymbiont of Bathymodiolus sp. [FNVW] 4594 4670 + Arg ACG [ENA] ¡û
>W1910377351 FUKI01000126 Gammaproteobacteria Crenothrix polyspora [FUKI] 103214 103290 + Arg ACG [ENA] ¡û
>W1810090407 PGFZ01000007 Gammaproteobacteria Methylovulum psychrotolerans Sph1 [PGFZ] 218408 218332 - Arg ACG [ENA] ¡û
>W1810154936 PIZT01000016 Gammaproteobacteria Methylomonas sp. Kb3 [PIZT] 44837 44913 + Arg ACG [ENA] ¡û
>W1810295996 PTIY01000002 Gammaproteobacteria Methylobacter tundripaludum OWC-G53F [PTIY] 314879 314955 + Arg ACG [ENA] ¡û
>C151098016 FO082060 Gammaproteobacteria Methylotuvimicrobium alcaliphilum 20Z [FO082060] 3256619 3256543 - Arg ACG [Ensembl] ¡û
>C11114750 CP002738 Gammaproteobacteria Methylomonas methanica MC09 [CP002738] 4110165 4110089 - Arg ACG [Ensembl] ¡û
>W1511397853 JTDD01000002 Gammaproteobacteria Methylomonas denitrificans FJG1 [JTDD] 54027 54103 + Arg ACG [ENA] ¡û
>W1511569408 LAJX01000203 Gammaproteobacteria Methylocucumis oryzae Sn10-6 [LAJX] 18549 18625 + Arg ACG [ENA] ¡û
>W11164364 AFJF01000003 Gammaproteobacteria Methylomicrobium album BG8 [AFJF] 220581 220657 + Arg ACG [ENA] ¡û
>C161072134 CP014360 Gammaproteobacteria Methylomonas sp. DH-1 [CP014360] 3532521 3532445 - Arg ACG [Ensembl] ¡û
>C161072469 CP014476 Gammaproteobacteria Methylomonas denitrificans FJG1 [CP014476] 742499 742423 - Arg ACG [Ensembl] ¡û
>W1610046463 BBCK01000001 Gammaproteobacteria Methylomonas koyamae JCM 16701 [BBCK] 23124 23200 + Arg ACG [ENA] ¡û
>W1610940713 LUUF01000003 Gammaproteobacteria Methylomonas methanica [LUUF] 10693 10617 - Arg ACG [ENA] ¡û
>W1610940777 LUUG01000087 Gammaproteobacteria Methylomonas methanica [LUUG] 15359 15435 + Arg ACG [ENA] ¡û
>W1610940807 LUUH01000046 Gammaproteobacteria Methylomonas methanica [LUUH] 17971 18047 + Arg ACG [ENA] ¡û
>W1610940871 LUUI01000163 Gammaproteobacteria Methylomonas lenta [LUUI] 13748 13672 - Arg ACG [ENA] ¡û
>W1610940918 LUUJ01000134 Gammaproteobacteria Methylomonas koyamae [LUUJ] 134670 134746 + Arg ACG [ENA] ¡û
>W1610940949 LUUK01000177 Gammaproteobacteria Methylomonas koyamae [LUUK] 47990 48066 + Arg ACG [ENA] ¡û
>W1610940981 LUUL01000068 Gammaproteobacteria Methylomonas koyamae [LUUL] 14678 14602 - Arg ACG [ENA] ¡û
>W1710043259 BBCK01000001 Gammaproteobacteria Methylomonas koyamae JCM 16701 [BBCK] 23124 23200 + Arg ACG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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