tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.178237 (61 seq.)
>W1710852730 LLVZ01000008 Alphaproteobacteria Candidatus Liberibacter solanacearum [LLVZ] 205 129 - Met CAT [ENA] ¡û
>W1711167134 LVWB01000013 Alphaproteobacteria Candidatus Liberibacter solanacearum [LVWB] 97040 97116 + Met CAT [ENA] ¡û
>W1711174260 LWEB01000002 Alphaproteobacteria Candidatus Liberibacter solanacearum [LWEB] 671013 671089 + Met CAT [ENA] ¡û
>W1711709205 MSYP01000001 Alphaproteobacteria Rhodovulum sulfidophilum [MSYP] 3158585 3158509 - Met CAT [ENA] ¡û
>W1711709262 MSYR01000001 Alphaproteobacteria Rhodovulum sulfidophilum [MSYR] 315394 315470 + Met CAT [ENA] ¡û
>W131242032 BASI01000005 Alphaproteobacteria Rhodovulum sulfidophilum DSM 1374 [BASI] 663643 663567 - Met CAT [ENA] ¡û
>WENV013088 AACY020358402 Marine microbial communities from Global Ocean Sampling (GOS) 465 543 + Met CAT [ENA]
>C171035310 CP015039 Alphaproteobacteria Rhodovulum sp. P5 [CP015039] 3342858 3342782 - Met CAT - ¡û
>WENV180637801 OCRG01134360 [OCRG] marine metagenome; seawater 306 382 + Met CAT [ENA] ¢þ
>W141065742 AQQW01000004 Alphaproteobacteria Roseivivax marinus 22II-s10s [AQQW] 160272 160348 + Met CAT [ENA] ¡û
>W141284658 JALZ01000051 Alphaproteobacteria Roseivivax halodurans JCM 10272 [JALZ] 12757 12833 + Met CAT [ENA] ¡û
>W141284812 JAME01000011 Alphaproteobacteria Roseivivax isoporae LMG 25204 [JAME] 9406 9482 + Met CAT [ENA] ¡û
>WENV170119338 CENJ01133319 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 304 228 - Met CAT [ENA] ¢þ
>WENV170129645 CENQ01118442 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 243 319 + Met CAT [ENA] ¢þ
>WENV170133555 CENU01032664 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4113 4189 + Met CAT [ENA] ¢þ
>WENV170144438 CENY01152004 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4645 4569 - Met CAT [ENA] ¢þ
>WENV170161198 CEOK01198313 [CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1324 1400 + Met CAT [ENA] ¢þ
>WENV170164230 CEOM01206848 [CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1316 1392 + Met CAT [ENA] ¢þ
>WENV170180871 CEOW01139561 [CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 599 523 - Met CAT [ENA] ¢þ
>WENV170185127 CEOZ01188036 [CEOZ] marine metagenome genome assembly TARA_064_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 339 263 - Met CAT [ENA] ¢þ
>WENV170187589 CEPA01171574 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1726 1650 - Met CAT [ENA] ¢þ
>WENV170195574 CEPJ01142940 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9638 9714 + Met CAT [ENA] ¢þ
>WENV170234870 CEQL01019121 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 304 228 - Met CAT [ENA] ¢þ
>WENV170237059 CEQM01028428 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1770 1846 + Met CAT [ENA] ¢þ
>WENV170258597 CEQY01086246 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1045 969 - Met CAT [ENA] ¢þ
>WENV170288315 CERX01084399 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 146 222 + Met CAT [ENA] ¢þ
>WENV170296219 CESD01229186 [CESD] marine metagenome genome assembly TARA_098_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 685 609 - Met CAT [ENA] ¢þ
>WENV170317263 CESP01137114 [CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 578 654 + Met CAT [ENA] ¢þ
>WENV170344373 CETE01097179 [CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9616 9692 + Met CAT [ENA] ¢þ
>WENV170403159 CEUF01041504 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 179 + Met CAT [ENA] ¢þ
>WENV170453211 CEUZ01292184 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4607 4531 - Met CAT [ENA] ¢þ
>WENV170467004 CEVE01106196 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 310 234 - Met CAT [ENA] ¢þ
>WENV170473463 CEVH01039947 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 376 452 + Met CAT [ENA] ¢þ
>WENV170498222 CEVT01015896 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 90 166 + Met CAT [ENA] ¢þ
>WENV170584958 FUFK010250687 [FUFK] metagenome; unknown 394 318 - Met CAT [ENA] ¢þ
>WENV170826563 MDSY01112790 [MDSY] marine metagenome; seawater 1752 1828 + Met CAT [ENA] ¢þ
>WENV170861470 MDTB01064914 [MDTB] marine metagenome; seawater 3624 3700 + Met CAT [ENA] ¢þ
>WENV170862307 MDTB01076028 [MDTB] marine metagenome; seawater 12195 12271 + Met CAT [ENA] ¢þ
>WENV170888224 MDTC01253756 [MDTC] marine metagenome; seawater 9721 9797 + Met CAT [ENA] ¢þ
>WENV170893110 MDTD01047938 [MDTD] marine metagenome; seawater 19894 19970 + Met CAT [ENA] ¢þ
>WENV170903345 MDTD01200165 [MDTD] marine metagenome; seawater 9 85 + Met CAT [ENA] ¢þ
>WENV170906966 MDTE01046116 [MDTE] marine metagenome; seawater 5054 5130 + Met CAT [ENA] ¢þ
>WENV170932664 MDTG01206701 [MDTG] marine metagenome; seawater 8425 8501 + Met CAT [ENA] ¢þ
>C141002016 CP003789 Alphaproteobacteria Liberibacter crescens BT-1 [CP003789] 935027 934951 - Met CAT [Ensembl] ¡û
>W1910442665 FWFK01000003 Alphaproteobacteria Roseivivax jejudonensis CECT 8625 [FWFK] 9048 9124 + Met CAT [ENA] ¡û
>W1810195737 PKRU01000038 Alphaproteobacteria Candidatus Liberibacter solanacearum solanacearum haplotype D1 [PKRU] 371 295 - Met CAT [ENA] ¡û
>W1810464048 QAAA01000023 Alphaproteobacteria Rhodovulum imhoffii DSM 18064 [QAAA] 4266 4190 - Met CAT [ENA] ¡û
>C11113738 CP002371 Alphaproteobacteria Candidatus Liberibacter solanacearum CLso-ZC1 [CP002371] 1075708 1075632 - Met CAT [Ensembl] ¡û
>W1511205998 JMTK01000005 Alphaproteobacteria Candidatus Liberibacter solanacearum solanacearum LsoNZ1 [JMTK] 94517 94441 - Met CAT [ENA] ¡û
>W1511248653 JNVH01000096 Alphaproteobacteria Candidatus Liberibacter solanacearum solanacearum R1 [JNVH] 13388 13312 - Met CAT [ENA] ¡û
>W1511327477 JQIG01000007 Alphaproteobacteria Candidatus Liberibacter solanacearum solanacearum HenneA [JQIG] 94512 94436 - Met CAT [ENA] ¡û
>C161001438 AP014800 Alphaproteobacteria Rhodovulum sulfidophilum DSM 2351 [AP014800] 996238 996314 + Met CAT [Ensembl] ¡û
>C161027958 CP010522 Alphaproteobacteria Liberibacter crescens BT-0 [CP010522] 988989 988913 - Met CAT - ¡û
>C161087741 CP015418 Alphaproteobacteria Rhodovulum sulfidophilum DSM 1374 [CP015418] 3742011 3741935 - Met CAT - ¡û
>C161087790 CP015421 Alphaproteobacteria Rhodovulum sulfidophilum SNK001 [CP015421] 3706509 3706433 - Met CAT [Ensembl] ¡û
>W1610715869 LLVZ01000008 Alphaproteobacteria Candidatus Liberibacter solanacearum [LLVZ] 205 129 - Met CAT [ENA] ¡û
>W1710513609 FNAH01000001 Alphaproteobacteria Paracoccus isoporae [FNAH] 46819 46743 - Met CAT [ENA] ¡û
>W1710543838 FOAI01000011 Alphaproteobacteria Roseivivax marinus [FOAI] 9471 9395 - Met CAT [ENA] ¡û
>W1710559529 FOMS01000003 Alphaproteobacteria Roseivivax sediminis [FOMS] 12436 12512 + Met CAT [ENA] ¡û
>W1710595099 FSRS01000001 Alphaproteobacteria Rhodovulum sp. ES.010 [FSRS] 2198556 2198632 + Met CAT [ENA] ¡û
>W1710599549 FTOU01000013 Alphaproteobacteria Paracoccus saliphilus [FTOU] 13583 13507 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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