tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.178736 (96 seq.)
>W1711175103 LWEN01000094 Alphaproteobacteria Erythrobacter sp. HI0019 [LWEN] 10417 10341 - Arg CCT [ENA] ¡û
>W1711175177 LWEO01000258 Alphaproteobacteria Erythrobacter sp. HI0020 [LWEO] 11440 11516 + Arg CCT [ENA] ¡û
>W1711175355 LWES01000427 Alphaproteobacteria Erythrobacter sp. HI0028 [LWES] 7739 7815 + Arg CCT [ENA] ¡û
>W1711175531 LWEV01001668 Alphaproteobacteria Erythrobacter sp. HI0037 [LWEV] 5363 5287 - Arg CCT [ENA] ¡û
>W1711175571 LWEV01002593 Alphaproteobacteria Erythrobacter sp. HI0037 [LWEV] 1432 1356 - Arg CCT [ENA] ¡û
>W1711175620 LWEW01001204 Alphaproteobacteria Erythrobacter sp. HI0038 [LWEW] 782 858 + Arg CCT [ENA] ¡û
>W1711175655 LWEW01001906 Alphaproteobacteria Erythrobacter sp. HI0038 [LWEW] 10 86 + Arg CCT [ENA] ¡û
>W1711176167 LWFF01000034 Alphaproteobacteria Erythrobacter sp. HI0063 [LWFF] 1718 1794 + Arg CCT [ENA] ¡û
>W1711176772 LWFO01000581 Alphaproteobacteria Erythrobacter sp. HI0074 [LWFO] 6888 6964 + Arg CCT [ENA] ¡û
>W1711176919 LWFR01000030 Alphaproteobacteria Erythrobacter sp. HI0077 [LWFR] 891 967 + Arg CCT [ENA] ¡û
>W1711229444 LXYL01000009 Alphaproteobacteria Erythrobacter sp. EhN03 [LXYL] 157617 157693 + Arg CCT [ENA] ¡û
>W1711229604 LXYP01000002 Alphaproteobacteria Sphingomonadales bacterium EhC05 [LXYP] 468 392 - Arg CCT [ENA] ¡û
>W1711506367 MKWI01000019 Alphaproteobacteria Sphingobium sp. 66-54 [MKWI] 68542 68618 + Arg CCT [ENA] ¡û
>C171072723 CP018097 Alphaproteobacteria Aurantiacibacter gangjinensis CGMCC 1.15024 [CP018097, CP018098] 2014056 2013980 - Arg CCT - ¡û
>C009141 CP000157 Alphaproteobacteria Erythrobacter litoralis HTCC2594 [CP000157] 1337892 1337816 - Arg CCT [Ensembl] ¡û
>w027530 ABCG01000001 Alphaproteobacteria Erythrobacter sp. SD-21 [ABCG] 424941 424868 - Arg CCT [ENA] ¡û
>WENV180084828 MPMD02247005 [MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter 1078 1002 - Arg CCT [ENA] ¢þ
>WENV180090314 MPMF02133773 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 564 640 + Arg CCT [ENA] ¢þ
>WENV182543362 OJBA01031991 [OJBA] seawater metagenome; Sea water 140 64 - Arg CCT [ENA] ¢þ
>WENV182549034 OJBX01008308 [OJBX] seawater metagenome; Sea water 1015 1091 + Arg CCT [ENA] ¢þ
>WENV182553828 OJCR01036844 [OJCR] seawater metagenome; Sea water 372 448 + Arg CCT [ENA] ¢þ
>WENV182553904 OJCR01051383 [OJCR] seawater metagenome; Sea water 352 276 - Arg CCT [ENA] ¢þ
>WENV182559889 OJDQ01015503 [OJDQ] seawater metagenome; Sea water 717 793 + Arg CCT [ENA] ¢þ
>WENV182563620 OJEC01007292 [OJEC] seawater metagenome; Sea water 965 1041 + Arg CCT [ENA] ¢þ
>WENV182571955 OJFK01041794 [OJFK] seawater metagenome; Sea water 305 381 + Arg CCT [ENA] ¢þ
>WENV182572300 OJFL01002772 [OJFL] seawater metagenome; Sea water 4165 4241 + Arg CCT [ENA] ¢þ
>WENV182573631 OJFP01007504 [OJFP] seawater metagenome; Sea water 657 733 + Arg CCT [ENA] ¢þ
>WENV182575857 OJFX01000011 [OJFX] seawater metagenome; Sea water 982 906 - Arg CCT [ENA] ¢þ
>WENV182579580 OJGS01026938 [OJGS] seawater metagenome; Sea water 477 401 - Arg CCT [ENA] ¢þ
>WENV182580099 OJGU01003640 [OJGU] seawater metagenome; Sea water 553 477 - Arg CCT [ENA] ¢þ
>WENV182580682 OJGW01007419 [OJGW] seawater metagenome; Sea water 690 766 + Arg CCT [ENA] ¢þ
>WENV182581625 OJGX01022792 [OJGX] seawater metagenome; Sea water 604 680 + Arg CCT [ENA] ¢þ
>WENV182584140 OJHF01014055 [OJHF] seawater metagenome; Sea water 564 488 - Arg CCT [ENA] ¢þ
>WENV182586922 OJHK01014057 [OJHK] seawater metagenome; Sea water 105 29 - Arg CCT [ENA] ¢þ
>W141273295 CCSI01000001 Alphaproteobacteria Qipengyuania vulgaris [CCSI] 646635 646559 - Arg CCT [ENA] ¡û
>WENV183056681 OLHJ01004333 [OLHJ] seawater metagenome; Sea water 1879 1803 - Arg CCT [ENA] ¢þ
>WENV183749274 PPFU01145454 [PPFU] hypolithon metagenome; Antarctic Hypolithon 2592 2668 + Arg CCT [ENA] ¢þ
>WENV183797082 PVBE010301543 [PVBE] marine metagenome; water 4836 4760 - Arg CCT [ENA] ¢þ
>WENV170130517 CENR01005567 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1018 1094 + Arg CCT [ENA] ¢þ
>WENV170131364 CENS01052281 [CENS] marine metagenome genome assembly TARA_022_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5595 5519 - Arg CCT [ENA] ¢þ
>WENV170193337 CEPH01062488 [CEPH] marine metagenome genome assembly TARA_048_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 285 209 - Arg CCT [ENA] ¢þ
>WENV170202436 CEPR01029184 [CEPR] marine metagenome genome assembly TARA_039_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 316 240 - Arg CCT [ENA] ¢þ
>WENV170209251 CEPV01044045 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1539 1463 - Arg CCT [ENA] ¢þ
>WENV170216121 CEPX01192322 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 773 849 + Arg CCT [ENA] ¢þ
>WENV170221758 CEQC01006579 [CEQC] marine metagenome genome assembly TARA_076_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 955 1031 + Arg CCT [ENA] ¢þ
>WENV170229314 CEQG01102523 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 196 272 + Arg CCT [ENA] ¢þ
>WENV170246676 CEQP01294072 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 79 3 - Arg CCT [ENA] ¢þ
>WENV170268980 CERH01017376 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4769 4693 - Arg CCT [ENA] ¢þ
>WENV170276490 CERN01054102 [CERN] marine metagenome genome assembly TARA_066_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 892 968 + Arg CCT [ENA] ¢þ
>WENV170283407 CERU01008418 [CERU] marine metagenome genome assembly TARA_065_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2549 2625 + Arg CCT [ENA] ¢þ
>WENV170290093 CERY01098971 [CERY] marine metagenome genome assembly TARA_065_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 938 862 - Arg CCT [ENA] ¢þ
>WENV170307825 CESK01012889 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1874 1950 + Arg CCT [ENA] ¢þ
>WENV170336168 CESZ01190164 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 1 - Arg CCT [ENA] ¢þ
>WENV170360650 CETL01131222 [CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 543 467 - Arg CCT [ENA] ¢þ
>WENV170366662 CETO01085574 [CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 598 674 + Arg CCT [ENA] ¢þ
>WENV170372237 CETS01074971 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 219 143 - Arg CCT [ENA] ¢þ
>WENV170468537 CEVF01041335 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 369 445 + Arg CCT [ENA] ¢þ
>WENV170476522 CEVI01118826 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 555 479 - Arg CCT [ENA] ¢þ
>WENV170477988 CEVJ01196855 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1946 2020 + Arg CCT [ENA] ¢þ
>WENV170478906 CEVK01105886 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2586 2662 + Arg CCT [ENA] ¢þ
>WENV170487949 CEVO01108986 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 396 320 - Arg CCT [ENA] ¢þ
>WENV170550674 CXWF01011871 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2546 2622 + Arg CCT [ENA] ¢þ
>WENV170579695 FUFK010040425 [FUFK] metagenome; unknown 198415 198491 + Arg CCT [ENA] ¢þ
>WENV170583088 FUFK010121943 [FUFK] metagenome; unknown 330 254 - Arg CCT [ENA] ¢þ
>WENV170736521 LULM01006226 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 1329 1253 - Arg CCT [ENA] ¢þ
>WENV170761413 LUMV01000278 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 7527 7451 - Arg CCT [ENA] ¢þ
>WENV170765399 LWDU01037353 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 244394 244318 - Arg CCT [ENA] ¢þ
>WENV170890512 MDTD01011041 [MDTD] marine metagenome; seawater 4951 5027 + Arg CCT [ENA] ¢þ
>WENV170908060 MDTE01060113 [MDTE] marine metagenome; seawater 152 76 - Arg CCT [ENA] ¢þ
>WENV170944498 MDTG01416010 [MDTG] marine metagenome; seawater 8148 8224 + Arg CCT [ENA] ¢þ
>WENV170947736 MEHZ010908848 [MEHZ] marine metagenome; marine surface water 201 125 - Arg CCT [ENA] ¢þ
>WENV170947775 MEHZ010929434 [MEHZ] marine metagenome; marine surface water 453 377 - Arg CCT [ENA] ¢þ
>C181108519 CP024920 Alphaproteobacteria Qipengyuania seohaensis SW-135 [CP024920] 2896751 2896827 + Arg CCT - ¡û
>C191007626 AP019389 Alphaproteobacteria Qipengyuania flava KJ5 [AP019389] 1846511 1846435 - Arg CCT - ¡û
>W09101655 AAGG01000005 Alphaproteobacteria Erythrobacter litoralis HTCC2594 [AAGG] 314153 314229 + Arg CCT [ENA] ¡û
>W1911767910 QXFK01000014 Alphaproteobacteria Pelagerythrobacter aerophilus Ery1 [QXFK] 214409 214333 - Arg CCT [ENA] ¡û
>W10108360 ADAE01000018 Alphaproteobacteria Citromicrobium bathyomarinum JL354 [ADAE] 136603 136679 + Arg CCT [ENA] ¡û
>W11110747 ADAE01000018 Alphaproteobacteria Citromicrobium bathyomarinum JL354 [ADAE] 136603 136679 + Arg CCT [ENA] ¡û
>W1511533475 JYNE01000027 Alphaproteobacteria Qipengyuania citrea LAMA 915 [JYNE] 270865 270941 + Arg CCT [ENA] ¡û
>W1511590568 LBHC01000001 Alphaproteobacteria Aurantiacibacter gangjinensis K7-2 [LBHC] 546579 546503 - Arg CCT [ENA] ¡û
>C161098727 CP016545 Alphaproteobacteria Paraurantiacibacter namhicola JCM 16345 [CP016545] 1766964 1766888 - Arg CCT [Ensembl] ¡û
>W1610576213 LAPS01000001 Alphaproteobacteria Citromicrobium sp. WPS32 [LAPS] 26590 26514 - Arg CCT [ENA] ¡û
>W1610983416 LWEN01000094 Alphaproteobacteria Erythrobacter sp. HI0019 [LWEN] 10417 10341 - Arg CCT [ENA] ¡û
>W1610983490 LWEO01000258 Alphaproteobacteria Erythrobacter sp. HI0020 [LWEO] 11440 11516 + Arg CCT [ENA] ¡û
>W1610983668 LWES01000427 Alphaproteobacteria Erythrobacter sp. HI0028 [LWES] 7739 7815 + Arg CCT [ENA] ¡û
>W1610983844 LWEV01001668 Alphaproteobacteria Erythrobacter sp. HI0037 [LWEV] 5363 5287 - Arg CCT [ENA] ¡û
>W1610983884 LWEV01002593 Alphaproteobacteria Erythrobacter sp. HI0037 [LWEV] 1432 1356 - Arg CCT [ENA] ¡û
>W1610983933 LWEW01001204 Alphaproteobacteria Erythrobacter sp. HI0038 [LWEW] 782 858 + Arg CCT [ENA] ¡û
>W1610983968 LWEW01001906 Alphaproteobacteria Erythrobacter sp. HI0038 [LWEW] 10 86 + Arg CCT [ENA] ¡û
>W1610984480 LWFF01000034 Alphaproteobacteria Erythrobacter sp. HI0063 [LWFF] 1718 1794 + Arg CCT [ENA] ¡û
>W1610985085 LWFO01000581 Alphaproteobacteria Erythrobacter sp. HI0074 [LWFO] 6888 6964 + Arg CCT [ENA] ¡û
>W1610985232 LWFR01000030 Alphaproteobacteria Erythrobacter sp. HI0077 [LWFR] 891 967 + Arg CCT [ENA] ¡û
>W1611013314 LXYL01000009 Alphaproteobacteria Erythrobacter sp. EhN03 [LXYL] 157617 157693 + Arg CCT [ENA] ¡û
>W1611013474 LXYP01000002 Alphaproteobacteria Sphingomonadales bacterium EhC05 [LXYP] 468 392 - Arg CCT [ENA] ¡û
>W1710572863 FOWZ01000002 Alphaproteobacteria Qipengyuania nanhaisediminis [FOWZ] 296789 296713 - Arg CCT [ENA] ¡û
>W1710694575 LAPS01000001 Alphaproteobacteria Citromicrobium sp. WPS32 [LAPS] 26590 26514 - Arg CCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK