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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.179229 (212 seq.)
>W131217120
ATWL01000003
Actinomycetota
Ruania albidiflava DSM 18029 [ATWL]
78699
78623
-
Asp
GTC
[ENA]
¡û
>W1711540070
MLZL01000008
Actinomycetota
Bifidobacterium animalis subsp. lactis [MLZL]
7223
7299
+
Asp
GTC
[ENA]
¡û
>W131224000
AUCL01000021
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [AUCL]
390
316
-
Asp
GTC
[ENA]
¡û
>C171060458
CP017297
Actinomycetota
Brachybacterium sp. P6-10-X1 [CP017297]
2004471
2004547
+
Asp
GTC
-
¡û
>W131217490
ATWW01000006
Actinomycetota
Bifidobacterium pseudolongum AGR2145 [ATWW]
130540
130614
+
Asp
GTC
[ENA]
¡û
>W131232734
AUJM01000011
Actinomycetota
Bifidobacterium sp. AGR2158 [AUJM]
368573
368497
-
Asp
GTC
[ENA]
¡û
>WENV180035341
FTKT01271331
[FTKT] metagenome; soil
9
83
+
Asp
GTC
[ENA]
¢þ
>WENV180217163
OBAR01000604
[OBAR] human gut metagenome; human gut
33121
33047
-
Asp
GTC
[ENA]
¢þ
>WENV180277917
OBHX01001233
[OBHX] metagenome; feces
22586
22512
-
Asp
GTC
[ENA]
¢þ
>WENV180309003
OBJR01418690
[OBJR] soil metagenome; soil
143
219
+
Asp
GTC
[ENA]
¢þ
>WENV180332879
OBLF01000022
[OBLF] metagenome; feces
92023
92097
+
Asp
GTC
[ENA]
¢þ
>WENV180347397
OBLO01000251
[OBLO] metagenome; feces
21670
21596
-
Asp
GTC
[ENA]
¢þ
>WENV180414245
OBVC01010389
[OBVC] human gut metagenome; faeces
167
93
-
Asp
GTC
[ENA]
¢þ
>WENV180462529
OBYB01005815
[OBYB] human gut metagenome; faeces
1319
1245
-
Asp
GTC
[ENA]
¢þ
>WENV180462530
OBYB01005815
[OBYB] human gut metagenome; faeces
1007
933
-
Asp
GTC
[ENA]
¢þ
>WENV180495920
OCAC01000145
[OCAC] human gut metagenome; faeces
7534
7460
-
Asp
GTC
[ENA]
¢þ
>WENV180598676
OCPN01000014
[OCPN] human gut metagenome; faeces
7253
7327
+
Asp
GTC
[ENA]
¢þ
>W08009135
ABOT01000002
Actinomycetota
Bifidobacterium animalis subsp. lactis HN019 [ABOT]
298722
298798
+
Asp
GTC
[ENA]
¡û
>WENV181251600
OFFO01043369
[OFFO] mouse gut metagenome; faeces
135
61
-
Asp
GTC
[ENA]
¢þ
>WENV181273592
OFGH01004119
[OFGH] mouse gut metagenome; faeces
571
645
+
Asp
GTC
[ENA]
¢þ
>WENV181300777
OFHN01006455
[OFHN] mouse gut metagenome; faeces
3620
3694
+
Asp
GTC
[ENA]
¢þ
>WENV181343846
OFMJ01015490
[OFMJ] human gut metagenome; human gut
876
802
-
Asp
GTC
[ENA]
¢þ
>WENV181345109
OFMK01026960
[OFMK] human gut metagenome; human gut
663
737
+
Asp
GTC
[ENA]
¢þ
>WENV181373471
OFQX01067371
[OFQX] wastewater metagenome; WWTP Novara (Effluent)
143
69
-
Asp
GTC
[ENA]
¢þ
>W141169136
AXVO01000003
Actinomycetota
Bifidobacterium choerinum DSM 20434 [AXVO]
86083
86007
-
Asp
GTC
[ENA]
¡û
>WENV181904164
OGXX01006886
[OGXX] human gut metagenome; faeces
1408
1482
+
Asp
GTC
[ENA]
¢þ
>W141258212
CBWX010000073
Actinomycetota
Bifidobacterium animalis subsp. lactis CECT 8145 [CBWX]
1279314
1279238
-
Asp
GTC
[ENA]
¡û
>WENV182628683
OJKQ01026674
[OJKQ] metagenome; faeces
280
205
-
Asp
GTC
[ENA]
¢þ
>WENV183136056
OLOF01000029
[OLOF] human gut metagenome; faeces
7237
7311
+
Asp
GTC
[ENA]
¢þ
>WENV183147239
OLON01000024
[OLON] human gut metagenome; faeces
7217
7291
+
Asp
GTC
[ENA]
¢þ
>WENV183174232
OLPE01000484
[OLPE] human gut metagenome; faeces
31545
31471
-
Asp
GTC
[ENA]
¢þ
>WENV183182471
OLPK01000325
[OLPK] human gut metagenome; faeces
13290
13216
-
Asp
GTC
[ENA]
¢þ
>WENV183182472
OLPK01000325
[OLPK] human gut metagenome; faeces
13181
13107
-
Asp
GTC
[ENA]
¢þ
>WENV183214284
OLQE01004314
[OLQE] human gut metagenome; faeces
5
79
+
Asp
GTC
[ENA]
¢þ
>WENV183562324
OOBW01000042
[OOBW] human gut metagenome; human gut
62914
62840
-
Asp
GTC
[ENA]
¢þ
>WENV183562325
OOBW01000042
[OOBW] human gut metagenome; human gut
62602
62528
-
Asp
GTC
[ENA]
¢þ
>WENV183581319
OOCN01017088
[OOCN] human gut metagenome; human gut
122
48
-
Asp
GTC
[ENA]
¢þ
>WENV183792796
PPYF01463087
[PPYF] human gut metagenome; stool from patient with Crohn's disease
5261
5335
+
Asp
GTC
[ENA]
¢þ
>WENV170554042
CXWK01044326
[CXWK] wastewater metagenome; activated sludge
118
44
-
Asp
GTC
[ENA]
¢þ
>WENV170636536
JFBN01302031
[JFBN] chicken gut metagenome; ceca of Broiler chicken
2091
2167
+
Asp
GTC
[ENA]
¢þ
>WENV170689475
LFRM01296453
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
25
99
+
Asp
GTC
[ENA]
¢þ
>WENV170689476
LFRM01296453
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
134
210
+
Asp
GTC
[ENA]
¢þ
>C181023420
CP017098
Actinomycetota
Bifidobacterium animalis BL3 [CP017098]
581557
581631
+
Asp
GTC
-
¡û
>C181027192
CP017695
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [CP017695]
1665978
1665904
-
Asp
GTC
-
¡û
>C181027193
CP017695
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [CP017695]
1665869
1665795
-
Asp
GTC
-
¡û
>C181030126
CP018044
Actinomycetota
Bifidobacterium choerinum FMB-1 [CP018044]
1247672
1247746
+
Asp
GTC
-
¡û
>C181068144
CP022544
Actinomycetota
Bifidobacterium pseudolongum UMB-MBP-01 [CP022544]
566385
566459
+
Asp
GTC
-
¡û
>C181068145
CP022544
Actinomycetota
Bifidobacterium pseudolongum UMB-MBP-01 [CP022544]
566494
566568
+
Asp
GTC
-
¡û
>C181071786
CP022724
Actinomycetota
Bifidobacterium animalis subsp. lactis S7 [CP022724]
1083607
1083681
+
Asp
GTC
-
¡û
>C181084649
CP023563
Actinomycetota
Brachybacterium vulturis VM2412 [CP023563]
1355602
1355527
-
Asp
GTC
-
¡û
>C191007094
AP019307
Actinomycetota
Nocardioides baekrokdamisoli KCTC 39748 [AP019307]
1504746
1504672
-
Asp
GTC
-
¡û
>C191051303
CP027295
Actinomycetota
Brachybacterium sp. SGAir0954 [CP027295]
1431916
1431993
+
Asp
GTC
-
¡û
>C191057532
CP028460
Actinomycetota
Bifidobacterium animalis subsp. animalis CNCM I-4602 [CP028460]
599317
599391
+
Asp
GTC
-
¡û
>W141523661
JGYM01000002
Actinomycetota
Bifidobacterium animalis subsp. animalis [JGYM]
231019
231095
+
Asp
GTC
[ENA]
¡û
>C191073846
CP031154
Actinomycetota
Bifidobacterium animalis subsp. lactis HN019 [CP031154]
581372
581446
+
Asp
GTC
-
¡û
>W141524051
JGYU01000001
Actinomycetota
Bifidobacterium choerinum [JGYU]
238667
238591
-
Asp
GTC
[ENA]
¡û
>W141524152
JGYV01000030
Actinomycetota
Bifidobacterium cuniculi [JGYV]
24089
24163
+
Asp
GTC
[ENA]
¡û
>W141524153
JGYV01000030
Actinomycetota
Bifidobacterium cuniculi [JGYV]
24201
24277
+
Asp
GTC
[ENA]
¡û
>W141524239
JGYX01000005
Actinomycetota
Bifidobacterium pullorum gallinarum [JGYX]
16076
16152
+
Asp
GTC
[ENA]
¡û
>W141524240
JGYX01000005
Actinomycetota
Bifidobacterium pullorum gallinarum [JGYX]
16388
16462
+
Asp
GTC
[ENA]
¡û
>C191078852
CP031703
Actinomycetota
Bifidobacterium animalis subsp. lactis IDCC4301 [CP031703]
1590873
1590799
-
Asp
GTC
-
¡û
>W141524671
JGZG01000005
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum [JGZG]
541118
541044
-
Asp
GTC
[ENA]
¡û
>W141524672
JGZG01000005
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum [JGZG]
541009
540933
-
Asp
GTC
[ENA]
¡û
>W141524703
JGZH01000001
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum [JGZH]
155820
155894
+
Asp
GTC
[ENA]
¡û
>W141524704
JGZH01000001
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum [JGZH]
155929
156005
+
Asp
GTC
[ENA]
¡û
>W141524834
JGZJ01000010
Actinomycetota
Bifidobacterium pullorum [JGZJ]
196558
196482
-
Asp
GTC
[ENA]
¡û
>W141524835
JGZJ01000010
Actinomycetota
Bifidobacterium pullorum [JGZJ]
196246
196172
-
Asp
GTC
[ENA]
¡û
>W141524952
JGZM01000002
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JGZM]
424522
424446
-
Asp
GTC
[ENA]
¡û
>W141524953
JGZM01000002
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JGZM]
424210
424136
-
Asp
GTC
[ENA]
¡û
>W141525093
JGZP01000002
Actinomycetota
Bifidobacterium stellenboschense [JGZP]
36465
36389
-
Asp
GTC
[ENA]
¡û
>W141525106
JGZP01000005
Actinomycetota
Bifidobacterium stellenboschense [JGZP]
52831
52907
+
Asp
GTC
[ENA]
¡û
>W141525360
JGZU01000016
Actinomycetota
Bifidobacterium tsurumiense [JGZU]
48748
48674
-
Asp
GTC
[ENA]
¡û
>C191143380
CP035464
Actinomycetota
Bifidobacterium pullorum subsp. gallinarum CACC 514 [CP035464]
1968574
1968648
+
Asp
GTC
-
¡û
>C191143381
CP035464
Actinomycetota
Bifidobacterium pullorum subsp. gallinarum CACC 514 [CP035464]
1968886
1968960
+
Asp
GTC
-
¡û
>C191144099
CP035497
Actinomycetota
Bifidobacterium animalis 01 [CP035497]
581505
581579
+
Asp
GTC
-
¡û
>W141559169
JHWN01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JHWN]
162487
162561
+
Asp
GTC
[ENA]
¡û
>W141559186
JHWN01000017
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JHWN]
21658
21582
-
Asp
GTC
[ENA]
¡û
>W1910179785
BJKG01000010
Actinomycetota
Bifidobacterium animalis J063 [BJKG]
41125
41051
-
Asp
GTC
[ENA]
¡û
>W1910179825
BJKH01000011
Actinomycetota
Bifidobacterium animalis J218 [BJKH]
722886
722812
-
Asp
GTC
[ENA]
¡û
>W1910179855
BJKI01000001
Actinomycetota
Bifidobacterium animalis J231 [BJKI]
41136
41062
-
Asp
GTC
[ENA]
¡û
>C09100990
CP001213
Actinomycetota
Bifidobacterium animalis subsp. lactis AD011 [CP001213]
581660
581736
+
Asp
GTC
[Ensembl]
¡û
>C09101039
CP001515
Actinomycetota
Bifidobacterium animalis subsp. lactis Bl-04 Bl-04; ATCC SD5219 [CP001515]
581502
581578
+
Asp
GTC
[Ensembl]
¡û
>C09101088
CP001606
Actinomycetota
Bifidobacterium animalis subsp. lactis DSM 10140 [CP001606]
581503
581579
+
Asp
GTC
[Ensembl]
¡û
>W1910342671
FTRE01000001
Actinomycetota
Bifidobacterium animalis [FTRE]
298920
298994
+
Asp
GTC
[ENA]
¡û
>W1910343290
FTRP01000001
Actinomycetota
Bifidobacterium animalis [FTRP]
298921
298995
+
Asp
GTC
[ENA]
¡û
>C141002643
CP003941
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27673 [CP003941]
586204
586280
+
Asp
GTC
[Ensembl]
¡û
>W1910814874
MVOG01000044
Actinomycetota
Bifidobacterium italicum 70 [MVOG]
11750
11676
-
Asp
GTC
[ENA]
¡û
>W1910814893
MVOH01000006
Actinomycetota
Bifidobacterium criceti 71 [MVOH]
252669
252595
-
Asp
GTC
[ENA]
¡û
>W1910829203
MWWX01000002
Actinomycetota
Bifidobacterium lemurum DSM 28807 [MWWX]
268292
268218
-
Asp
GTC
[ENA]
¡û
>W1910829325
MWWZ01000006
Actinomycetota
Bifidobacterium eulemuris DSM 100216 [MWWZ]
92691
92617
-
Asp
GTC
[ENA]
¡û
>W1910910823
NHMR02000001
Actinomycetota
Bifidobacterium animalis subsp. animalis YL2 [NHMR]
883928
883854
-
Asp
GTC
[ENA]
¡û
>W1910910824
NHMR02000001
Actinomycetota
Bifidobacterium animalis subsp. animalis YL2 [NHMR]
883818
883744
-
Asp
GTC
[ENA]
¡û
>W1910923021
NIGQ01000001
Actinomycetota
Bifidobacterium animalis subsp. lactis LMG P-17502_2 [NIGQ]
521709
521635
-
Asp
GTC
[ENA]
¡û
>W1910923070
NIGR01000001
Actinomycetota
Bifidobacterium animalis subsp. lactis LMG P-17502_1 [NIGR]
521709
521635
-
Asp
GTC
[ENA]
¡û
>W1911078254
NMWT01000001
Actinomycetota
Bifidobacterium parmae 77 [NMWT]
151513
151587
+
Asp
GTC
[ENA]
¡û
>W1911078255
NMWT01000001
Actinomycetota
Bifidobacterium parmae 77 [NMWT]
229911
229987
+
Asp
GTC
[ENA]
¡û
>W1911079610
NMYC01000005
Actinomycetota
Bifidobacterium anseris 72 [NMYC]
690565
690639
+
Asp
GTC
[ENA]
¡û
>W1911768212
QXGI01000007
Actinomycetota
Bifidobacterium castoris 2020B [QXGI]
95391
95317
-
Asp
GTC
[ENA]
¡û
>W1911768292
QXGK01000001
Actinomycetota
Bifidobacterium samirii 2033B [QXGK]
182470
182396
-
Asp
GTC
[ENA]
¡û
>W1911768294
QXGK01000001
Actinomycetota
Bifidobacterium samirii 2033B [QXGK]
83791
83715
-
Asp
GTC
[ENA]
¡û
>W1810049141
PCGZ01000010
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1524B [PCGZ]
95833
95907
+
Asp
GTC
[ENA]
¡û
>W1810049142
PCGZ01000010
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1524B [PCGZ]
95942
96016
+
Asp
GTC
[ENA]
¡û
>W1810049164
PCHA01000018
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1747B [PCHA]
35637
35711
+
Asp
GTC
[ENA]
¡û
>W1810049165
PCHA01000018
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1747B [PCHA]
35746
35820
+
Asp
GTC
[ENA]
¡û
>W1810049245
PCHB01000019
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1744B [PCHB]
962
888
-
Asp
GTC
[ENA]
¡û
>W1810049246
PCHB01000019
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1744B [PCHB]
853
779
-
Asp
GTC
[ENA]
¡û
>W1810049252
PCHB01000037
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1744B [PCHB]
1885
1811
-
Asp
GTC
[ENA]
¡û
>W1810049253
PCHB01000037
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1744B [PCHB]
1776
1702
-
Asp
GTC
[ENA]
¡û
>W1810049270
PCHC01000006
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1619B [PCHC]
46646
46720
+
Asp
GTC
[ENA]
¡û
>W1810049271
PCHC01000006
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1619B [PCHC]
46755
46829
+
Asp
GTC
[ENA]
¡û
>W1810049323
PCHD01000006
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1734B [PCHD]
35619
35693
+
Asp
GTC
[ENA]
¡û
>W1810049324
PCHD01000006
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1734B [PCHD]
35728
35802
+
Asp
GTC
[ENA]
¡û
>W1810049383
PCHE01000009
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1691B [PCHE]
1009
935
-
Asp
GTC
[ENA]
¡û
>W1810049384
PCHE01000009
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1691B [PCHE]
900
826
-
Asp
GTC
[ENA]
¡û
>W1810049428
PCHF01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum 1595B [PCHF]
803040
802966
-
Asp
GTC
[ENA]
¡û
>W1810049429
PCHF01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum 1595B [PCHF]
802931
802857
-
Asp
GTC
[ENA]
¡û
>W1810049474
PCHG01000011
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1549B [PCHG]
67432
67506
+
Asp
GTC
[ENA]
¡û
>W1810049475
PCHG01000011
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1549B [PCHG]
67541
67615
+
Asp
GTC
[ENA]
¡û
>W1810049523
PCHH01000001
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1520B [PCHH]
701061
701135
+
Asp
GTC
[ENA]
¡û
>W1810049524
PCHH01000001
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1520B [PCHH]
701170
701244
+
Asp
GTC
[ENA]
¡û
>W1810049578
PCHI01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum 1370B [PCHI]
29468
29542
+
Asp
GTC
[ENA]
¡û
>W1810049579
PCHI01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum 1370B [PCHI]
29577
29651
+
Asp
GTC
[ENA]
¡û
>W1810084947
PESQ01000001
Actinomycetota
Bifidobacterium animalis subsp. lactis BB-12 [PESQ]
313566
313492
-
Asp
GTC
[ENA]
¡û
>W1810121955
PHUS01000001
Actinomycetota
Bifidobacterium animalis subsp. lactis BM 25 [PHUS]
313558
313484
-
Asp
GTC
[ENA]
¡û
>W1810541564
QDIK01000001
Actinomycetota
Bifidobacterium animalis subsp. lactis DS28_2 [QDIK]
247682
247756
+
Asp
GTC
[ENA]
¡û
>W1810541630
QDIL01000002
Actinomycetota
Bifidobacterium animalis subsp. lactis DS27_2 [QDIL]
247657
247731
+
Asp
GTC
[ENA]
¡û
>W1810541733
QDIN01000002
Actinomycetota
Bifidobacterium animalis subsp. lactis DS24_2 [QDIN]
191613
191539
-
Asp
GTC
[ENA]
¡û
>W1810541782
QDIO01000030
Actinomycetota
Bifidobacterium animalis subsp. lactis DS23_2 [QDIO]
37012
37086
+
Asp
GTC
[ENA]
¡û
>W1810541824
QDIP01000002
Actinomycetota
Bifidobacterium animalis DS2_2 [QDIP]
247663
247737
+
Asp
GTC
[ENA]
¡û
>W1810541924
QDIR01000002
Actinomycetota
Bifidobacterium animalis DS15_2 [QDIR]
247655
247729
+
Asp
GTC
[ENA]
¡û
>W1810542025
QDIT01000001
Actinomycetota
Bifidobacterium animalis DS11_2 [QDIT]
722853
722779
-
Asp
GTC
[ENA]
¡û
>W1810542074
QDIU01000001
Actinomycetota
Bifidobacterium animalis DS1_2 [QDIU]
722853
722779
-
Asp
GTC
[ENA]
¡û
>W1810542111
QDIV01000012
Actinomycetota
Bifidobacterium animalis subsp. lactis CF3_2 [QDIV]
22588
22514
-
Asp
GTC
[ENA]
¡û
>W1810542303
QDIZ01000004
Actinomycetota
Bifidobacterium animalis DS20_2 [QDIZ]
247655
247729
+
Asp
GTC
[ENA]
¡û
>W1810681110
QKSQ01000001
Actinomycetota
Curtobacterium sp. MCSS17_016 [QKSQ]
539544
539468
-
Asp
GTC
[ENA]
¡û
>W1810813799
QRZV01000001
Actinomycetota
Bifidobacterium pseudolongum AF13-3LB [QRZV]
607337
607411
+
Asp
GTC
[ENA]
¡û
>W1810813800
QRZV01000001
Actinomycetota
Bifidobacterium pseudolongum AF13-3LB [QRZV]
607446
607520
+
Asp
GTC
[ENA]
¡û
>W1810837794
QSSU01000001
Actinomycetota
Bifidobacterium animalis TF04-14 [QSSU]
381444
381370
-
Asp
GTC
[ENA]
¡û
>W1810839888
QSUF01000003
Actinomycetota
Bifidobacterium animalis OM05-7AA [QSUF]
7209
7283
+
Asp
GTC
[ENA]
¡û
>C151024230
CP007457
Actinomycetota
Bifidobacterium pseudolongum PV8-2 [CP007457]
618721
618795
+
Asp
GTC
[Ensembl]
¡û
>C151024231
CP007457
Actinomycetota
Bifidobacterium pseudolongum PV8-2 [CP007457]
618830
618906
+
Asp
GTC
[Ensembl]
¡û
>C151026462
CP007522
Actinomycetota
Bifidobacterium animalis subsp. lactis KLDS2.0603 [CP007522]
581414
581490
+
Asp
GTC
[Ensembl]
¡û
>C151042205
CP009045
Actinomycetota
Bifidobacterium animalis subsp. lactis BF052 [CP009045]
581337
581413
+
Asp
GTC
[Ensembl]
¡û
>C151068776
CP010433
Actinomycetota
Bifidobacterium animalis A6 [CP010433]
581504
581580
+
Asp
GTC
[Ensembl]
¡û
>C10101301
CP001853
Actinomycetota
Bifidobacterium animalis subsp. lactis BB-12 [CP001853]
1216895
1216971
+
Asp
GTC
[Ensembl]
¡û
>C10101343
CP001892
Actinomycetota
Bifidobacterium animalis subsp. lactis V9 [CP001892]
581504
581580
+
Asp
GTC
[Ensembl]
¡û
>C11101899
CP003039
Actinomycetota
Bifidobacterium animalis subsp. lactis BLC1 [CP003039]
581498
581574
+
Asp
GTC
[Ensembl]
¡û
>C11101948
CP002915
Actinomycetota
Bifidobacterium animalis subsp. lactis CNCM I-2494 [CP002915]
581464
581540
+
Asp
GTC
[Ensembl]
¡û
>C121002606
CP002567
Actinomycetota
Bifidobacterium animalis subsp. animalis ATCC 25527 [CP002567]
599437
599513
+
Asp
GTC
[Ensembl]
¡û
>C121013642
CP003497
Actinomycetota
Bifidobacterium animalis subsp. lactis B420 [CP003497]
581501
581577
+
Asp
GTC
[Ensembl]
¡û
>C121013691
CP003498
Actinomycetota
Bifidobacterium animalis subsp. lactis Bi-07 [CP003498]
581503
581579
+
Asp
GTC
[Ensembl]
¡û
>C161087439
CP015407
Actinomycetota
Bifidobacterium animalis subsp. animalis YL2 [CP015407]
1056570
1056646
+
Asp
GTC
[Ensembl]
¡û
>C161087440
CP015407
Actinomycetota
Bifidobacterium animalis subsp. animalis YL2 [CP015407]
1056680
1056756
+
Asp
GTC
[Ensembl]
¡û
>W121031673
AHGW01000002
Actinomycetota
Bifidobacterium animalis subsp. lactis BS 01 [AHGW]
7217
7293
+
Asp
GTC
[ENA]
¡û
>W1610027697
AWFK01000005
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0483 [AWFK]
7188
7264
+
Asp
GTC
[ENA]
¡û
>W1610027759
AWFL01000006
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27536 [AWFL]
247429
247505
+
Asp
GTC
[ENA]
¡û
>W1610027806
AWFM01000005
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27674 [AWFM]
247234
247310
+
Asp
GTC
[ENA]
¡û
>W1610027851
AWFN01000003
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0499 [AWFN]
626602
626526
-
Asp
GTC
[ENA]
¡û
>W1610027852
AWFN01000003
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0499 [AWFN]
626492
626416
-
Asp
GTC
[ENA]
¡û
>W1610027906
AWFO01000006
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 1489 [AWFO]
225543
225619
+
Asp
GTC
[ENA]
¡û
>W1610027966
AWFP01000007
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27673 [AWFP]
45672
45596
-
Asp
GTC
[ENA]
¡û
>W1610027991
AWFQ01000001
Actinomycetota
Bifidobacterium animalis subsp. animalis ATCC 27672 [AWFQ]
659981
660057
+
Asp
GTC
[ENA]
¡û
>W1610027992
AWFQ01000001
Actinomycetota
Bifidobacterium animalis subsp. animalis ATCC 27672 [AWFQ]
660091
660167
+
Asp
GTC
[ENA]
¡û
>W1610058866
BCAE01000014
Actinomycetota
Actinobacteria bacterium UC5.1-1B11 [BCAE]
6248
6174
-
Asp
GTC
[ENA]
¡û
>W1610058867
BCAE01000014
Actinomycetota
Actinobacteria bacterium UC5.1-1B11 [BCAE]
6139
6063
-
Asp
GTC
[ENA]
¡û
>W1610060681
BCFK01000048
Actinomycetota
Bifidobacterium aesculapii [BCFK]
36587
36663
+
Asp
GTC
[ENA]
¡û
>W1610060703
BCFK01000071
Actinomycetota
Bifidobacterium aesculapii [BCFK]
58103
58179
+
Asp
GTC
[ENA]
¡û
>W1610083122
CBUQ010000007
Actinomycetota
Bifidobacterium animalis subsp. animalis IM386 [CBUQ]
159216
159292
+
Asp
GTC
[ENA]
¡û
>C131012131
CP004053
Actinomycetota
Bifidobacterium animalis subsp. lactis Bl12 [CP004053]
581366
581442
+
Asp
GTC
[Ensembl]
¡û
>W1610518568
JDTM01000002
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JDTM]
416961
416885
-
Asp
GTC
[ENA]
¡û
>W1610518569
JDTM01000002
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JDTM]
416649
416575
-
Asp
GTC
[ENA]
¡û
>W1610518831
JDTR01000026
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [JDTR]
3795
3869
+
Asp
GTC
[ENA]
¡û
>W1610518890
JDTT01000014
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM DSM 20088 [JDTT]
78757
78681
-
Asp
GTC
[ENA]
¡û
>W1610518932
JDTT01000067
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM DSM 20088 [JDTT]
12325
12399
+
Asp
GTC
[ENA]
¡û
>W1610518998
JDTV01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JDTV]
110642
110568
-
Asp
GTC
[ENA]
¡û
>W1610518999
JDTV01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JDTV]
110533
110457
-
Asp
GTC
[ENA]
¡û
>W1610519180
JDTZ01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099 [JDTZ]
305805
305731
-
Asp
GTC
[ENA]
¡û
>W1610519181
JDTZ01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099 [JDTZ]
305696
305620
-
Asp
GTC
[ENA]
¡û
>W1610519591
JDUI01000009
Actinomycetota
Bifidobacterium pullorum DSM 20433 [JDUI]
45355
45431
+
Asp
GTC
[ENA]
¡û
>W1610519592
JDUI01000009
Actinomycetota
Bifidobacterium pullorum DSM 20433 [JDUI]
45721
45795
+
Asp
GTC
[ENA]
¡û
>W1610519634
JDUJ01000012
Actinomycetota
Bifidobacterium choerinum DSM 20434 [JDUJ]
70647
70571
-
Asp
GTC
[ENA]
¡û
>W1610519720
JDUL01000016
Actinomycetota
Bifidobacterium cuniculi DSM 20435 [JDUL]
32270
32196
-
Asp
GTC
[ENA]
¡û
>W1610519721
JDUL01000016
Actinomycetota
Bifidobacterium cuniculi DSM 20435 [JDUL]
32158
32082
-
Asp
GTC
[ENA]
¡û
>W1610519800
JDUN01000001
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
13706
13782
+
Asp
GTC
[ENA]
¡û
>W1610519801
JDUN01000001
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
14018
14092
+
Asp
GTC
[ENA]
¡û
>WENV085361
BABC01001130
Gut microbiome of Human (healthy human sample In-B, Infant, Male)
6
84
+
Asp
GTC
[ENA]
>WENV085362
BABC01001130
Gut microbiome of Human (healthy human sample In-B, Infant, Male)
116
192
+
Asp
GTC
[ENA]
>W1710023905
AWFK01000005
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0483 [AWFK]
7188
7264
+
Asp
GTC
[ENA]
¡û
>W1710023961
AWFN01000003
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0499 [AWFN]
626602
626526
-
Asp
GTC
[ENA]
¡û
>W1710023962
AWFN01000003
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0499 [AWFN]
626492
626416
-
Asp
GTC
[ENA]
¡û
>W1710024016
AWFO01000006
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 1489 [AWFO]
225543
225619
+
Asp
GTC
[ENA]
¡û
>W1710055625
BCAE01000014
Actinomycetota
Actinobacteria bacterium UC5.1-1B11 [BCAE]
6248
6174
-
Asp
GTC
[ENA]
¡û
>W1710055626
BCAE01000014
Actinomycetota
Actinobacteria bacterium UC5.1-1B11 [BCAE]
6139
6063
-
Asp
GTC
[ENA]
¡û
>W1710057936
BCFK01000048
Actinomycetota
Bifidobacterium aesculapii [BCFK]
36587
36663
+
Asp
GTC
[ENA]
¡û
>W1710057958
BCFK01000071
Actinomycetota
Bifidobacterium aesculapii [BCFK]
58103
58179
+
Asp
GTC
[ENA]
¡û
>W1710082912
BDIS01000011
Actinomycetota
Bifidobacterium lemurum [BDIS]
315267
315193
-
Asp
GTC
[ENA]
¡û
>W1710088242
CBUQ010000007
Actinomycetota
Bifidobacterium animalis subsp. animalis IM386 [CBUQ]
159216
159292
+
Asp
GTC
[ENA]
¡û
>W1710537587
FNTX01000002
Actinomycetota
Ruania alba album [FNTX]
59660
59736
+
Asp
GTC
[ENA]
¡û
>W1710614088
JDTM01000002
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JDTM]
416961
416885
-
Asp
GTC
[ENA]
¡û
>W1710614089
JDTM01000002
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JDTM]
416649
416575
-
Asp
GTC
[ENA]
¡û
>W1710614351
JDTR01000026
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [JDTR]
3795
3869
+
Asp
GTC
[ENA]
¡û
>W1710614453
JDTV01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JDTV]
110642
110568
-
Asp
GTC
[ENA]
¡û
>W1710614454
JDTV01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JDTV]
110533
110457
-
Asp
GTC
[ENA]
¡û
>W1710614635
JDTZ01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099 [JDTZ]
305805
305731
-
Asp
GTC
[ENA]
¡û
>W1710614636
JDTZ01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099 [JDTZ]
305696
305620
-
Asp
GTC
[ENA]
¡û
>W1710615046
JDUI01000009
Actinomycetota
Bifidobacterium pullorum DSM 20433 [JDUI]
45355
45431
+
Asp
GTC
[ENA]
¡û
>W1710615047
JDUI01000009
Actinomycetota
Bifidobacterium pullorum DSM 20433 [JDUI]
45721
45795
+
Asp
GTC
[ENA]
¡û
>W1710615089
JDUJ01000012
Actinomycetota
Bifidobacterium choerinum DSM 20434 [JDUJ]
70647
70571
-
Asp
GTC
[ENA]
¡û
>W1710615175
JDUL01000016
Actinomycetota
Bifidobacterium cuniculi DSM 20435 [JDUL]
32270
32196
-
Asp
GTC
[ENA]
¡û
>W1710615176
JDUL01000016
Actinomycetota
Bifidobacterium cuniculi DSM 20435 [JDUL]
32158
32082
-
Asp
GTC
[ENA]
¡û
>W1710615213
JDUN01000001
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
13706
13782
+
Asp
GTC
[ENA]
¡û
>W1710615214
JDUN01000001
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
14018
14092
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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