tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.180403 (102 seq.)
>W1710808942 LKDZ01000038 Betaproteobacteria Variovorax boronicumulans [LKDZ] 92454 92538 + Leu GAG [ENA] ¡û
>W1710821657 LKTU01000048 Betaproteobacteria Variovorax paradoxus [LKTU] 25350 25266 - Leu GAG [ENA] ¡û
>W1710821683 LKTV01000029 Betaproteobacteria Variovorax paradoxus [LKTV] 52423 52507 + Leu GAG [ENA] ¡û
>W1710821732 LKTW01000032 Betaproteobacteria Variovorax paradoxus [LKTW] 52401 52485 + Leu GAG [ENA] ¡û
>W1710821787 LKTX01000022 Betaproteobacteria Variovorax paradoxus [LKTX] 52415 52499 + Leu GAG [ENA] ¡û
>W1710821833 LKTY01000022 Betaproteobacteria Variovorax paradoxus [LKTY] 52393 52477 + Leu GAG [ENA] ¡û
>W1710821888 LKTZ01000026 Betaproteobacteria Variovorax paradoxus [LKTZ] 52379 52463 + Leu GAG [ENA] ¡û
>W1710860149 LMCQ01000022 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 22085 22169 + Leu GAG [ENA] ¡û
>W1710861743 LMDW01000001 Betaproteobacteria Variovorax sp. Root411 [LMDW] 1089242 1089326 + Leu GAG [ENA] ¡û
>W1710862497 LMEK01000024 Betaproteobacteria Variovorax sp. Root434 [LMEK] 158225 158141 - Leu GAG [ENA] ¡û
>W1710863082 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 679830 679914 + Leu GAG [ENA] ¡û
>W1711074194 LSJH01000635 Betaproteobacteria Xylophilus ampelinus [LSJH] 1828 1912 + Leu GAG [ENA] ¡û
>W1711123838 LUJJ01000030 Betaproteobacteria Variovorax boronicumulans [LUJJ] 81710 81626 - Leu GAG [ENA] ¡û
>W1711143347 LVHG01000027 Betaproteobacteria Variovorax paradoxus [LVHG] 121303 121387 + Leu GAG [ENA] ¡û
>W1711259911 LYVQ01000067 Betaproteobacteria Pelomonas sp. KK5 [LYVQ] 22789 22705 - Leu GAG [ENA] ¡û
>W1711386494 MEFM01000015 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 101257 101173 - Leu GAG [ENA] ¡û
>W1711387480 MEGR01000018 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 37324 37240 - Leu GAG [ENA] ¡û
>W1711506640 MKWO01000050 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 105884 105800 - Leu GAG [ENA] ¡û
>C171091653 CP019236 Betaproteobacteria Rhodoferax koreense DCY-110 [CP019236] 3730604 3730520 - Leu GAG - ¡û
>W131174628 ARIP01000056 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 20247 20331 + Leu GAG [ENA] ¡û
>W131180361 ARNA01000050 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 1088884 1088800 - Leu GAG [ENA] ¡û
>WENV180016720 FSVW01000251 [FSVW] metagenome; soil 2169 2085 - Leu GAG [ENA] ¢þ
>WENV180016814 FSVW01003079 [FSVW] metagenome; soil 249 165 - Leu GAG [ENA] ¢þ
>WENV180028843 FTJH01113330 [FTJH] metagenome; soil 348 432 + Leu GAG [ENA] ¢þ
>WENV180028872 FTJH01232886 [FTJH] metagenome; soil 1194 1278 + Leu GAG [ENA] ¢þ
>WENV180099589 NMRC01020089 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 353 269 - Leu GAG [ENA] ¢þ
>WENV181324524 OFLF01000424 [OFLF] marine metagenome; melt pond 1669 1585 - Leu GAG [ENA] ¢þ
>WENV181364803 OFPD01000739 [OFPD] sediment metagenome; Lake sediment 152 236 + Leu GAG [ENA] ¢þ
>WENV181365494 OFPR01002322 [OFPR] sediment metagenome; Lake sediment 491 575 + Leu GAG [ENA] ¢þ
>W141170108 AXWZ01000022 Betaproteobacteria Variovorax sp. JGI 0001020-M05 [AXWZ] 2006 1922 - Leu GAG [ENA] ¡û
>W141170124 AXXC01000008 Betaproteobacteria Variovorax sp. JGI 0001014-H11 [AXXC] 11988 11904 - Leu GAG [ENA] ¡û
>WENV183735112 PJUA01001032 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 6597 6513 - Leu GAG [ENA] ¢þ
>WENV183735628 PJUB01000261 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 26239 26155 - Leu GAG [ENA] ¢þ
>WENV183736264 PJUC01000352 [PJUC] soil metagenome; Soil enriched on filter paper 3243 3327 + Leu GAG [ENA] ¢þ
>WENV183741532 PJUG01000048 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 111288 111372 + Leu GAG [ENA] ¢þ
>WENV183741908 PJUH01000006 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 111288 111372 + Leu GAG [ENA] ¢þ
>WENV183744384 PJUK01015148 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 361 445 + Leu GAG [ENA] ¢þ
>WENV170559363 CXWL01120495 [CXWL] groundwater metagenome; biofilm material 2654 2570 - Leu GAG [ENA] ¢þ
>WENV170707113 LNAP01012902 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 5590 5506 - Leu GAG [ENA] ¢þ
>WENV171003353 NNBT01005981 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 4940 4856 - Leu GAG [ENA] ¢þ
>WENV171003629 NNBU01001074 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 4440 4356 - Leu GAG [ENA] ¢þ
>WENV171003747 NNBV01000582 [NNBV] plant metagenome; symbiotic tissue sample KVS11 124859 124775 - Leu GAG [ENA] ¢þ
>C181078491 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 4928420 4928336 - Leu GAG - ¡û
>C181159405 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 1896761 1896677 - Leu GAG - ¡û
>W141558070 JHVQ01000004 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 424613 424697 + Leu GAG [ENA] ¡û
>W09119940 ACEE01000038 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 36592 36508 - Leu GAG [ENA] ¡û
>C141002567 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 3823733 3823649 - Leu GAG [Ensembl] ¡û
>C09111120 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 3701339 3701255 - Leu GAG [Ensembl] ¡û
>W1910792833 MRCN01000011 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 80558 80474 - Leu GAG [ENA] ¡û
>W1911496708 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 4935873 4935789 - Leu GAG [ENA] ¡û
>W1911647334 QAJK01000043 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 38885 38801 - Leu GAG [ENA] ¡û
>W1911709220 QPIB01000009 Betaproteobacteria Xenophilus sp. E41 [QPIB] 68357 68441 + Leu GAG [ENA] ¡û
>W1911775310 QXMN01000006 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 59212 59128 - Leu GAG [ENA] ¡û
>W1810072252 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 1158453 1158369 - Leu GAG [ENA] ¡û
>W1810192708 PKMT01000001 Betaproteobacteria Variovorax sp. RO1 [PKMT] 1759506 1759590 + Leu GAG [ENA] ¡û
>W1810486663 QAYA01000005 Betaproteobacteria Variovorax sp. GV040 [QAYA] 314322 314406 + Leu GAG [ENA] ¡û
>W1810577539 QEOH01000017 Betaproteobacteria Variovorax sp. GV014 [QEOH] 169963 170047 + Leu GAG [ENA] ¡û
>W1810672547 QJTM01000009 Betaproteobacteria Variovorax sp. GV035 [QJTM] 180372 180456 + Leu GAG [ENA] ¡û
>W1810676115 QKLT01000010 Betaproteobacteria Variovorax sp. GV042 [QKLT] 180372 180456 + Leu GAG [ENA] ¡û
>W1810682468 QKUE01000003 Betaproteobacteria Variovorax sp. GV004 [QKUE] 699104 699188 + Leu GAG [ENA] ¡û
>SRA1014225 SRR023845.45359 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 8 92 + Leu GAG [SRA]
>SRA1016032 SRR023846.317459 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 187 271 + Leu GAG [SRA]
>SRA1016495 SRR023846.530639 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 56 140 + Leu GAG [SRA]
>W1511352963 JROV01000452 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 6200 6116 - Leu GAG [ENA] ¡û
>C11123602 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 4343008 4342924 - Leu GAG [Ensembl] ¡û
>W1511508931 JXQQ01000034 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 23075 22991 - Leu GAG [ENA] ¡û
>W1511555001 JZWI01000015 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 159203 159119 - Leu GAG [ENA] ¡û
>C161073195 CP014517 Betaproteobacteria Variovorax sp. PAMC 28711 [CP014517] 475898 475814 - Leu GAG [Ensembl] ¡û
>W121084989 AKIW01000107 Betaproteobacteria Variovorax sp. CF313 [AKIW] 24037 23953 - Leu GAG [ENA] ¡û
>W1610072157 BCUS01000043 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 19408 19324 - Leu GAG [ENA] ¡û
>W1610072224 BCUT01000007 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 19678 19762 + Leu GAG [ENA] ¡û
>W1610685619 LKTU01000048 Betaproteobacteria Variovorax paradoxus [LKTU] 25350 25266 - Leu GAG [ENA] ¡û
>W1610685645 LKTV01000029 Betaproteobacteria Variovorax paradoxus [LKTV] 52423 52507 + Leu GAG [ENA] ¡û
>W1610685694 LKTW01000032 Betaproteobacteria Variovorax paradoxus [LKTW] 52401 52485 + Leu GAG [ENA] ¡û
>W1610685749 LKTX01000022 Betaproteobacteria Variovorax paradoxus [LKTX] 52415 52499 + Leu GAG [ENA] ¡û
>W1610685795 LKTY01000022 Betaproteobacteria Variovorax paradoxus [LKTY] 52393 52477 + Leu GAG [ENA] ¡û
>W1610685850 LKTZ01000026 Betaproteobacteria Variovorax paradoxus [LKTZ] 52379 52463 + Leu GAG [ENA] ¡û
>W1610722495 LMCQ01000022 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 22085 22169 + Leu GAG [ENA] ¡û
>W1610724089 LMDW01000001 Betaproteobacteria Variovorax sp. Root411 [LMDW] 1089242 1089326 + Leu GAG [ENA] ¡û
>W1610724843 LMEK01000024 Betaproteobacteria Variovorax sp. Root434 [LMEK] 158225 158141 - Leu GAG [ENA] ¡û
>W1610725428 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 679830 679914 + Leu GAG [ENA] ¡û
>W1610913499 LSJH01000635 Betaproteobacteria Xylophilus ampelinus [LSJH] 1828 1912 + Leu GAG [ENA] ¡û
>W1610954355 LVHG01000027 Betaproteobacteria Variovorax paradoxus [LVHG] 121303 121387 + Leu GAG [ENA] ¡û
>W1710069359 BCUS01000043 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 19408 19324 - Leu GAG [ENA] ¡û
>W1710069426 BCUT01000007 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 19678 19762 + Leu GAG [ENA] ¡û
>W1710506190 FMUJ01000002 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 1247865 1247949 + Leu GAG [ENA] ¡û
>W1710512936 FMZU01000001 Betaproteobacteria Variovorax sp. CF079 [FMZU] 321249 321333 + Leu GAG [ENA] ¡û
>W1710517946 FNDR01000005 Betaproteobacteria Variovorax sp. OV700 [FNDR] 19915 19999 + Leu GAG [ENA] ¡û
>W1710530043 FNOL01000017 Betaproteobacteria Variovorax sp. YR634 [FNOL] 72542 72458 - Leu GAG [ENA] ¡û
>W1710531379 FNPM01000009 Betaproteobacteria Variovorax sp. YR266 [FNPM] 57447 57363 - Leu GAG [ENA] ¡û
>W1710534040 FNRO01000011 Betaproteobacteria Variovorax sp. YR216 [FNRO] 39620 39704 + Leu GAG [ENA] ¡û
>W1710538131 FNUI01000003 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 68818 68734 - Leu GAG [ENA] ¡û
>W1710539545 FNVM01000003 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 68810 68726 - Leu GAG [ENA] ¡û
>W1710542704 FNZJ01000002 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 146058 145974 - Leu GAG [ENA] ¡û
>W1710545313 FOBJ01000012 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 222585 222669 + Leu GAG [ENA] ¡û
>W1710554312 FOII01000014 Betaproteobacteria Variovorax sp. OV084 [FOII] 85206 85290 + Leu GAG [ENA] ¡û
>W1710557132 FOKS01000004 Betaproteobacteria Variovorax sp. NFACC26 [FOKS] 432037 432121 + Leu GAG [ENA] ¡û
>W1710558143 FOLP01000002 Betaproteobacteria Variovorax sp. OK212 [FOLP] 146058 145974 - Leu GAG [ENA] ¡û
>W1710562242 FOOV01000002 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 432037 432121 + Leu GAG [ENA] ¡û
>W1710571855 FOWG01000001 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 25195 25111 - Leu GAG [ENA] ¡û
>W1710572124 FOWL01000005 Betaproteobacteria Variovorax sp. OK605 [FOWL] 356763 356847 + Leu GAG [ENA] ¡û
>W1710573271 FOXJ01000001 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 480434 480518 + Leu GAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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