This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.182201 (15 seq.)
>CHL1810014602
KM462863
Viridiplantae
Watanabea reniformis (KM462863)
63872
63945
+
Arg
ACG
[ENA]
¡û
>CHL1810042844
KY433579
Stramenopiles
Dictyopteris divaricata (KY433579)
124371
124444
+
Arg
ACG
[ENA]
¡û
>CHL1830000100
FJ546412
Viridiplantae
Syntrichia ruralis (FJ546412)
92824
92898
+
Arg
ACG
[ENA]
¡û
>CHL1830000101
FJ546412
Viridiplantae
Syntrichia ruralis (FJ546412)
113885
113811
-
Arg
ACG
[ENA]
¡û
>CHL1830000708
KM111545
Viridiplantae
Sanionia uncinata (KM111545)
94998
95072
+
Arg
ACG
[ENA]
¡û
>CHL1830000709
KM111545
Viridiplantae
Sanionia uncinata (KM111545)
115947
115873
-
Arg
ACG
[ENA]
¡û
>CHL1830000885
KP765733
Viridiplantae
Nyholmiella obtusifolia (KP765733)
93726
93800
+
Arg
ACG
[ENA]
¡û
>CHL1830000886
KP765733
Viridiplantae
Nyholmiella obtusifolia (KP765733)
114523
114449
-
Arg
ACG
[ENA]
¡û
>CHL1830001707
KY126308
Viridiplantae
Physcomitrella patens (KY126308)
93484
93558
+
Arg
ACG
[ENA]
¡û
>CHL1830001708
KY126308
Viridiplantae
Physcomitrella patens (KY126308)
114643
114569
-
Arg
ACG
[ENA]
¡û
>CHL1830000751
KM462873
Viridiplantae
Neocystis brevis (KM462873)
201809
201736
-
Arg
ACG
[ENA]
¡û
>CHL1830000987
KT199255
Viridiplantae
Ankyra judayi SAG 17.84 (KT199255)
73755
73828
+
Arg
ACG
[ENA]
¡û
>CHL1830001061
KT625414
Viridiplantae
Jenufa minuta (KT625414)
73649
73722
+
Arg
ACG
[ENA]
¡û
>CHL090500003
AP005672
Viridiplantae
Physcomitrella patens subsp. patens
93474
93548
+
Arg
ACG
[ENA]
¡û
>CHL090500004
AP005672
Viridiplantae
Physcomitrella patens subsp. patens
114628
114554
-
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK