tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.183034 (83 seq.)
>W1710797291 LJSX01000043 Alphaproteobacteria Saliniramus fredricksonii HL-109 [LJSX] 234 310 + Trp CCA [ENA] ¡û
>W1710873121 LMMN01000058 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 6076 6152 + Trp CCA [ENA] ¡û
>W1710874329 LMNN01000001 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 448127 448051 - Trp CCA [ENA] ¡û
>W1710874422 LMNP01000005 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 356629 356553 - Trp CCA [ENA] ¡û
>W1710874481 LMNQ01000012 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 6867 6943 + Trp CCA [ENA] ¡û
>W1710874573 LMNS01000023 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 421789 421713 - Trp CCA [ENA] ¡û
>W1710878277 LMQV01000001 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 132358 132282 - Trp CCA [ENA] ¡û
>W1711009531 LQQT01000018 Alphaproteobacteria Chelatococcus daeguensis [LQQT] 187 263 + Trp CCA [ENA] ¡û
>W1711078694 LSNC01000049 Alphaproteobacteria Methylorubrum populi [LSNC] 147812 147736 - Trp CCA [ENA] ¡û
>W1711179455 LWHQ01000087 Alphaproteobacteria Methylobacterium platani [LWHQ] 20328 20252 - Trp CCA [ENA] ¡û
>W131051721 AMXU01000022 Alphaproteobacteria Methylobacterium sp. MB200 [AMXU] 7093 7017 - Trp CCA [ENA] ¡û
>W131222251 AUBC01000016 Alphaproteobacteria Salinarimonas rosea DSM 21201 [AUBC] 165294 165218 - Trp CCA [ENA] ¡û
>C171072684 CP018095 Alphaproteobacteria Chelatococcus daeguensis TAD1 [CP018095] 2447668 2447592 - Trp CCA - ¡û
>C171092167 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 2665511 2665435 - Trp CCA - ¡û
>C171115177 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 411287 411363 + Trp CCA - ¡û
>w015382 AAPC01000001 Alphaproteobacteria Xanthobacter autotrophicus Py2 [AAPC] 381878 381956 + Trp CCA [ENA] ¡û
>w001812 AAAP01001430 Alphaproteobacteria Paramagnetospirillum magnetotacticum [AAAP] 707 785 + Trp CCA [ENA] ¡û
>WENV181233996 OFET01000670 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 16234 16158 - Trp CCA [ENA] ¢þ
>WENV181234366 OFEU01000069 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 1330 1406 + Trp CCA [ENA] ¢þ
>WENV181295759 OFHJ01000475 [OFHJ] soil metagenome; Clay 15094 15018 - Trp CCA [ENA] ¢þ
>WENV181307944 OFIS01000052 [OFIS] sludge metagenome; sludge 152758 152682 - Trp CCA [ENA] ¢þ
>WENV181311643 OFJB01006608 [OFJB] sludge metagenome; sludge 3297 3221 - Trp CCA [ENA] ¢þ
>WENV181402124 OFTY01000139 [OFTY] sludge metagenome; sludge 1714 1790 + Trp CCA [ENA] ¢þ
>W141151398 AXBA01000040 Alphaproteobacteria Azorhizobium doebereinerae UFLA1-100 [AXBA] 42180 42104 - Trp CCA [ENA] ¡û
>W08002389 ABEX01000002 Alphaproteobacteria Methylorubrum extorquens CM4 [ABEX] 287897 287824 - Trp CCA [ENA] ¡û
>W08006168 ABIP01000065 Alphaproteobacteria Methylobacterium nodulans ORS 2060 [ABIP] 18824 18751 - Trp CCA [ENA] ¡û
>C08011445 CP000781 Alphaproteobacteria Xanthobacter autotrophicus Py2 [CP000781] 3739072 3739148 + Trp CCA [Ensembl] ¡û
>C08006499 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 4436594 4436670 + Trp CCA [Ensembl] ¡û
>C08006646 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 4769031 4769107 + Trp CCA [Ensembl] ¡û
>WENV170683269 LFIK01007978 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 3947 4023 + Trp CCA [ENA] ¢þ
>C181000359 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 4620753 4620829 + Trp CCA - ¡û
>W09106866 ABEC01000007 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 341416 341492 + Trp CCA [ENA] ¡û
>C181175646 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 4629354 4629430 + Trp CCA - ¡û
>C181180115 CP029552 Alphaproteobacteria Methylobacterium sp. 17Sr1-1 [CP029552] 4918563 4918639 + Trp CCA - ¡û
>C181227876 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 1380335 1380259 - Trp CCA - ¡û
>W141730061 JNIB01000001 Alphaproteobacteria Xanthobacter sp. 91 [JNIB] 3717662 3717738 + Trp CCA [ENA] ¡û
>W141733731 JNLC01000006 Alphaproteobacteria Bosea sp. 117 [JNLC] 196 272 + Trp CCA [ENA] ¡û
>W141821092 JQNH01000001 Alphaproteobacteria Rhizobiales bacterium YIM 77505 [JQNH] 1874213 1874137 - Trp CCA [ENA] ¡û
>C09107429 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 4606949 4607025 + Trp CCA [Ensembl] ¡û
>C09107515 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 4886604 4886680 + Trp CCA [Ensembl] ¡û
>C09107616 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 4471396 4471472 + Trp CCA [Ensembl] ¡û
>W1911148350 NPEU01000015 Alphaproteobacteria Rhodoplanes elegans DSM 11907 [NPEU] 6128 6204 + Trp CCA [ENA] ¡û
>W1911148523 NPEX01000234 Alphaproteobacteria Rhodoplanes roseus DSM 5909 [NPEX] 4827 4751 - Trp CCA [ENA] ¡û
>W1911708576 QOWC01000157 Alphaproteobacteria Methylobacterium crusticola MIMD6 [QOWC] 160 236 + Trp CCA [ENA] ¡û
>W1810079881 PELK01001268 Alphaproteobacteria Methylobacterium frigidaeris IER25-16 [PELK] 1249 1173 - Trp CCA [ENA] ¡û
>W1810658539 QJJJ01000006 Alphaproteobacteria Methylobacterium sp. B4 [QJJJ] 164982 164906 - Trp CCA [ENA] ¡û
>SRA1014826 SRR023845.331886 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 73 -1 - Trp CCA [SRA]
>C151094775 CP012398 Alphaproteobacteria Chelatococcus sp. CO-6 [CP012398] 114708 114632 - Trp CCA - ¡û
>W10110086 ADBQ01000013 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 20388 20312 - Trp CCA [ENA] ¡û
>C10112188 CP002026 Alphaproteobacteria Ancylobacter novellus DSM 506 [CP002026] 1495064 1495140 + Trp CCA [Ensembl] ¡û
>W11112523 ADBQ01000013 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 20388 20312 - Trp CCA [ENA] ¡û
>W1511507896 JXOD01000161 Alphaproteobacteria Methylobacterium platani JCM 14648 [JXOD] 19155 19079 - Trp CCA [ENA] ¡û
>W1511563221 LABX01000003 Alphaproteobacteria Methylobacterium aquaticum DSM 16371 [LABX] 2133 2209 + Trp CCA [ENA] ¡û
>W1511563333 LABY01000252 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 1715 1791 + Trp CCA [ENA] ¡û
>W1511563353 LABZ01000061 Alphaproteobacteria Methylobacterium tarhaniae DSM 25844 [LABZ] 18179 18103 - Trp CCA [ENA] ¡û
>C161004975 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 4285355 4285431 + Trp CCA [Ensembl] ¡û
>W1610042971 BAZM01000570 Alphaproteobacteria Methylorubrum rhodinum JCM 2811 [BAZM] 296 220 - Trp CCA [ENA] ¡û
>W1610043197 BAZP01002513 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 202 278 + Trp CCA [ENA] ¡û
>W121010661 AGJK01000015 Alphaproteobacteria Methylorubrum extorquens DSM 13060 [AGJK] 1311 1387 + Trp CCA [ENA] ¡û
>W121103225 AKZI01000095 Alphaproteobacteria Rhodovulum sp. PH10 [AKZI] 4856 4780 - Trp CCA [ENA] ¡û
>W121110770 ALIQ01000001 Alphaproteobacteria Chelatococcus sp. GW1 [ALIQ] 19563 19487 - Trp CCA [ENA] ¡û
>W1610516194 FMBM01000001 Alphaproteobacteria Saliniramus fredricksonii HL-109 [FMBM] 165043 164967 - Trp CCA [ENA] ¡û
>W1610590491 LDRM01000053 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 34326 34250 - Trp CCA [ENA] ¡û
>W1610590565 LDRN01000074 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 46005 45929 - Trp CCA [ENA] ¡û
>W1610631782 LIOL01000020 Alphaproteobacteria Chelatococcus sambhunathii [LIOL] 17589 17513 - Trp CCA [ENA] ¡û
>W1610661248 LJSX01000043 Alphaproteobacteria Saliniramus fredricksonii HL-109 [LJSX] 234 310 + Trp CCA [ENA] ¡û
>W1610735467 LMMN01000058 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 6076 6152 + Trp CCA [ENA] ¡û
>W1610736675 LMNN01000001 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 448127 448051 - Trp CCA [ENA] ¡û
>W1610736768 LMNP01000005 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 356629 356553 - Trp CCA [ENA] ¡û
>W1610736827 LMNQ01000012 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 6867 6943 + Trp CCA [ENA] ¡û
>W1610736919 LMNS01000023 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 421789 421713 - Trp CCA [ENA] ¡û
>W1610740623 LMQV01000001 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 132358 132282 - Trp CCA [ENA] ¡û
>W1610858051 LQQT01000018 Alphaproteobacteria Chelatococcus daeguensis [LQQT] 187 263 + Trp CCA [ENA] ¡û
>W1610917604 LSNC01000049 Alphaproteobacteria Methylorubrum populi [LSNC] 147812 147736 - Trp CCA [ENA] ¡û
>W1610987356 LWHQ01000087 Alphaproteobacteria Methylobacterium platani [LWHQ] 20328 20252 - Trp CCA [ENA] ¡û
>W1710040131 BAZM01000570 Alphaproteobacteria Methylorubrum rhodinum JCM 2811 [BAZM] 296 220 - Trp CCA [ENA] ¡û
>W1710040357 BAZP01002513 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 202 278 + Trp CCA [ENA] ¡û
>W1710501485 FMBM01000001 Alphaproteobacteria Saliniramus fredricksonii HL-109 [FMBM] 165043 164967 - Trp CCA [ENA] ¡û
>W1710548841 FOEB01000018 Alphaproteobacteria Methylobacterium sp. ap11 [FOEB] 1338 1414 + Trp CCA [ENA] ¡û
>W1710567564 FOSV01000026 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 46773 46697 - Trp CCA [ENA] ¡û
>W1710709771 LDRM01000053 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 34326 34250 - Trp CCA [ENA] ¡û
>W1710709845 LDRN01000074 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 46005 45929 - Trp CCA [ENA] ¡û
>W1710764667 LIOL01000020 Alphaproteobacteria Chelatococcus sambhunathii [LIOL] 17589 17513 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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