Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.183734 (37 seq.) |
|
>W131045994 |
AMSA01000002 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os45 [AMSA] |
31052 |
30976 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W131046055 |
AMSB01000002 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os34 [AMSB] |
73119 |
73195 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>W131062269 |
ANJR01000016 |
Betaproteobacteria |
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] |
210564 |
210488 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W1711430730 |
MIJG01000008 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
1160640 |
1160716 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>W1711765099 |
MUXB01000022 |
Betaproteobacteria |
Herbaspirillum sp. VT-16-41 [MUXB] |
100855 |
100779 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W1712110299 |
NJGV01000001 |
Betaproteobacteria |
Herbaspirillum aquaticum [NJGV] |
246553 |
246477 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>C171021214 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
3177488 |
3177564 |
+ |
Arg |
TCT |
- |
¡û |
|
>W141003819 |
AEEC02000010 |
Betaproteobacteria |
Herbaspirillum frisingense GSF30 [AEEC] |
262 |
186 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W141223510 |
BADI01000883 |
Betaproteobacteria |
Herbaspirillum sp. B65 [BADI] |
641 |
565 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W141223536 |
BADJ01000709 |
Betaproteobacteria |
Herbaspirillum sp. B501 [BADJ] |
692 |
616 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>WENV183727814 |
PJTP01000663 |
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment |
|
2069 |
2145 |
+ |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV183730131 |
PJTR01001075 |
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment |
|
6511 |
6435 |
- |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV183734937 |
PJUA01000191 |
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment |
|
46802 |
46726 |
- |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV183735749 |
PJUB01001239 |
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment |
|
3367 |
3291 |
- |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV183737717 |
PJUD01024373 |
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment |
|
538 |
462 |
- |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV183739645 |
PJUE01047658 |
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment |
|
167 |
91 |
- |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV183743530 |
PJUJ01003765 |
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment |
|
535 |
611 |
+ |
Arg |
TCT |
[ENA] |
¢þ |
|
>ENV08001434 |
ABMZ01019329 |
fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease |
|
20 |
96 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>ENV08001495 |
ABNE01016121 |
fish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling |
|
32 |
105 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>WENV170002098 |
AGFT01113162 |
[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom |
|
216 |
292 |
+ |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV170165652 |
CEON01208923 |
[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
1013 |
937 |
- |
Arg |
TCT |
[ENA] |
¢þ |
|
>WENV170201579 |
CEPQ01034147 |
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
1140 |
1216 |
+ |
Arg |
TCT |
[ENA] |
¢þ |
|
>C191029345 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
3466955 |
3467031 |
+ |
Arg |
TCT |
- |
¡û |
|
>C191124241 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
3137059 |
3137135 |
+ |
Arg |
TCT |
- |
¡û |
|
>C191156628 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
3316268 |
3316344 |
+ |
Arg |
TCT |
- |
¡û |
|
>W1910577856 |
JUGD01000011 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os38 [JUGD] |
210391 |
210315 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W1910578298 |
JWJC01000014 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os44 [JWJC] |
62783 |
62859 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>SRA1001504 |
SRR001067.35431 |
Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155) |
|
20 |
96 |
+ |
Arg |
TCT |
[SRA] |
|
|
>SRA1001571 |
SRR001072.11004 |
Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling (SRP000160) |
|
32 |
105 |
+ |
Arg |
TCT |
[SRA] |
|
|
>W1810194031 |
PKOI01000003 |
Betaproteobacteria |
Herbaspirillum sp. BH-1 [PKOI] |
222855 |
222779 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>C151087577 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
3299983 |
3300059 |
+ |
Arg |
TCT |
[Ensembl] |
¡û |
|
>C10107812 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
3299458 |
3299534 |
+ |
Arg |
TCT |
[Ensembl] |
¡û |
|
>WENV11102170 |
AGFT01113162 |
[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom |
|
216 |
292 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>C161060450 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
3403736 |
3403812 |
+ |
Arg |
TCT |
[Ensembl] |
¡û |
|
>W1610071849 |
BCUJ01000015 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
28755 |
28679 |
- |
Arg |
TCT |
[ENA] |
¡û |
|
>W121068700 |
AJVC01000003 |
Betaproteobacteria |
Herbaspirillum sp. GW103 [AJVC] |
1645512 |
1645588 |
+ |
Arg |
TCT |
[ENA] |
¡û |
|
>W1710069051 |
BCUJ01000015 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
28755 |
28679 |
- |
Arg |
TCT |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |