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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.183758 (6 seq.)
>W1910739244
MHRN01000026
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_44_36 [MHRN]
19672
19747
+
Asp
GTC
[ENA]
¡û
>W1910739803
MHSF01000009
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_44_35 [MHSF]
19690
19765
+
Asp
GTC
[ENA]
¡û
>W1910739995
MHSL01000007
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_44_15c [MHSL]
19681
19756
+
Asp
GTC
[ENA]
¡û
>W2010872674
MHRN01000026
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_44_36 [MHRN]
19672
19747
+
Asp
GTC
[ENA]
¡û
>W2010873233
MHSF01000009
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_44_35 [MHSF]
19690
19765
+
Asp
GTC
[ENA]
¡û
>W2010873425
MHSL01000007
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_44_15c [MHSL]
19681
19756
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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