This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.184388 (19 seq.)
>WENV170569676
FLMP01267600
[FLMP] seawater metagenome; seawater
456
532
+
Ile
GAT
[ENA]
¢þ
>C181204187
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
3609450
3609526
+
Ile
GAT
-
¡û
>C181204234
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
2908225
2908149
-
Ile
GAT
-
¡û
>C181204242
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
2689298
2689222
-
Ile
GAT
-
¡û
>C181204258
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
2358440
2358364
-
Ile
GAT
-
¡û
>W1810157529
PJCA01000016
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
62
138
+
Ile
GAT
[ENA]
¡û
>W1810157531
PJCA01000019
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
279
203
-
Ile
GAT
[ENA]
¡û
>C151103071
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
16476
16552
+
Ile
GAT
[Ensembl]
¡û
>C151103073
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
32747
32823
+
Ile
GAT
[Ensembl]
¡û
>C151103076
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
199992
200068
+
Ile
GAT
[Ensembl]
¡û
>C151103082
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
293965
294041
+
Ile
GAT
[Ensembl]
¡û
>C151103084
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
335658
335734
+
Ile
GAT
[Ensembl]
¡û
>C151103099
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
722481
722557
+
Ile
GAT
[Ensembl]
¡û
>C151103130
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
5044057
5043981
-
Ile
GAT
[Ensembl]
¡û
>C151103139
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
4956964
4956888
-
Ile
GAT
[Ensembl]
¡û
>C151103141
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
4904698
4904622
-
Ile
GAT
[Ensembl]
¡û
>C151103144
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
4473001
4472925
-
Ile
GAT
[Ensembl]
¡û
>C151103147
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
4355017
4354941
-
Ile
GAT
[Ensembl]
¡û
>W121113036
ALOE01000068
Gammaproteobacteria
Moritella marina ATCC 15381 [ALOE]
222
146
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK