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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.184960 (6 seq.)
>W1511600836
LBUC01000009
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWF2_38_1205 bacterium GW2011_GWF2_38_1205 [LBUC]
25735
25661
-
Arg
TCG
[ENA]
¡û
>W1511601123
LBUM01000011
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWC2_38_22 bacterium GW2011_GWC2_38_22 [LBUM]
25735
25661
-
Arg
TCG
[ENA]
¡û
>W1511601167
LBUN01000009
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWF1_38_22 bacterium GW2011_GWF1_38_22 [LBUN]
25735
25661
-
Arg
TCG
[ENA]
¡û
>W1511601281
LBUQ01000009
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWE2_38_254 bacterium GW2011_GWE2_38_254 [LBUQ]
25735
25661
-
Arg
TCG
[ENA]
¡û
>W1511601412
LBUU01000009
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWE1_38_31 bacterium GW2011_GWE1_38_31 [LBUU]
25735
25661
-
Arg
TCG
[ENA]
¡û
>W1511601478
LBUW01000009
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42 bacterium GW2011_GWD2_38_42 [LBUW]
25735
25661
-
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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