This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.187596 (138 seq.)
>WENV180127618
OATA01002496
[OATA] human gut metagenome; faeces
2674
2599
-
Ala
CGC
[ENA]
¢þ
>WENV180159660
OAVB01007119
[OAVB] human gut metagenome; faeces
2657
2582
-
Ala
CGC
[ENA]
¢þ
>WENV180164311
OAVJ01000647
[OAVJ] human gut metagenome; faeces
6401
6326
-
Ala
CGC
[ENA]
¢þ
>WENV180205729
OBAH01083970
[OBAH] human gut metagenome; human gut
111
36
-
Ala
CGC
[ENA]
¢þ
>WENV180208153
OBAI01070882
[OBAI] human gut metagenome; human gut
561
636
+
Ala
CGC
[ENA]
¢þ
>WENV180216241
OBAQ01043424
[OBAQ] human gut metagenome; human gut
496
571
+
Ala
CGC
[ENA]
¢þ
>WENV180417861
OBVI01013923
[OBVI] human gut metagenome; faeces
436
361
-
Ala
CGC
[ENA]
¢þ
>WENV180450187
OBXH01004070
[OBXH] human gut metagenome; faeces
3389
3464
+
Ala
CGC
[ENA]
¢þ
>WENV180499807
OCAI01000474
[OCAI] human gut metagenome; faeces
24071
23996
-
Ala
CGC
[ENA]
¢þ
>WENV180515970
OCHC01001271
[OCHC] human gut metagenome; human gut
9778
9703
-
Ala
CGC
[ENA]
¢þ
>WENV180521642
OCHF01028556
[OCHF] human gut metagenome; human gut
401
326
-
Ala
CGC
[ENA]
¢þ
>WENV180566118
OCLH01070885
[OCLH] human gut metagenome; human gut
182
107
-
Ala
CGC
[ENA]
¢þ
>WENV180567511
OCLL01066887
[OCLL] human gut metagenome; human gut
111
36
-
Ala
CGC
[ENA]
¢þ
>WENV180572201
OCLU01025035
[OCLU] human gut metagenome; human gut
89
14
-
Ala
CGC
[ENA]
¢þ
>WENV180604105
OCPS01001719
[OCPS] human gut metagenome; human gut
9423
9348
-
Ala
CGC
[ENA]
¢þ
>WENV180607726
OCPU01002673
[OCPU] human gut metagenome; human gut
2862
2787
-
Ala
CGC
[ENA]
¢þ
>WENV180614126
OCPY01001890
[OCPY] human gut metagenome; human gut
6579
6654
+
Ala
CGC
[ENA]
¢þ
>WENV180615860
OCPZ01044078
[OCPZ] human gut metagenome; human gut
491
416
-
Ala
CGC
[ENA]
¢þ
>WENV180632507
OCQZ01001585
[OCQZ] human gut metagenome; human gut
3928
4003
+
Ala
CGC
[ENA]
¢þ
>WENV180731044
ODGV01059632
[ODGV] human metagenome; G_DNA_Stool
269
344
+
Ala
CGC
[ENA]
¢þ
>WENV180753420
ODHT01015815
[ODHT] human metagenome; G_DNA_Stool
2092
2017
-
Ala
CGC
[ENA]
¢þ
>WENV180799031
ODJC01001661
[ODJC] human metagenome; G_DNA_Stool
1925
1850
-
Ala
CGC
[ENA]
¢þ
>WENV180829324
ODKA01115763
[ODKA] human metagenome; G_DNA_Stool
389
314
-
Ala
CGC
[ENA]
¢þ
>WENV180957582
ODUK01083553
[ODUK] human metagenome; G_DNA_Stool
9
84
+
Ala
CGC
[ENA]
¢þ
>WENV180971656
ODUU01060972
[ODUU] human metagenome; G_DNA_Stool
174
249
+
Ala
CGC
[ENA]
¢þ
>WENV180996218
ODVR01157677
[ODVR] human metagenome; G_DNA_Stool
56
131
+
Ala
CGC
[ENA]
¢þ
>WENV180997232
ODVS01007735
[ODVS] human metagenome; G_DNA_Stool
2646
2571
-
Ala
CGC
[ENA]
¢þ
>WENV181148871
OEHT01011467
[OEHT] human metagenome; G_DNA_Stool
539
614
+
Ala
CGC
[ENA]
¢þ
>WENV181184297
OEJW01138048
[OEJW] human metagenome; G_DNA_Stool
104
179
+
Ala
CGC
[ENA]
¢þ
>WENV181357570
OFMU01033437
[OFMU] human gut metagenome; human gut
993
1068
+
Ala
CGC
[ENA]
¢þ
>WENV181359177
OFMV01085342
[OFMV] human gut metagenome; human gut
215
140
-
Ala
CGC
[ENA]
¢þ
>WENV181397749
OFSD01005494
[OFSD] human gut metagenome; human gut
1355
1430
+
Ala
CGC
[ENA]
¢þ
>WENV181420724
OGCN01004955
[OGCN] human gut metagenome; human gut
8102
8177
+
Ala
CGC
[ENA]
¢þ
>WENV181435424
OGDF01003879
[OGDF] human gut metagenome; human gut
12769
12844
+
Ala
CGC
[ENA]
¢þ
>WENV181526870
OGHJ01064852
[OGHJ] metagenome; Human gut stool
543
618
+
Ala
CGC
[ENA]
¢þ
>WENV181608035
OGLM01048483
[OGLM] metagenome; Human gut stool
682
607
-
Ala
CGC
[ENA]
¢þ
>WENV181733878
OGQE01019762
[OGQE] human gut metagenome; faeces
174
99
-
Ala
CGC
[ENA]
¢þ
>WENV181757793
OGQT01094583
[OGQT] human gut metagenome; faeces
365
440
+
Ala
CGC
[ENA]
¢þ
>WENV181782693
OGRK01055301
[OGRK] human gut metagenome; faeces
561
486
-
Ala
CGC
[ENA]
¢þ
>WENV181832835
OGUP01096291
[OGUP] human gut metagenome; faeces
222
147
-
Ala
CGC
[ENA]
¢þ
>WENV182004206
OHBD01021130
[OHBD] human gut metagenome; feces
643
568
-
Ala
CGC
[ENA]
¢þ
>WENV182023399
OHCE01004010
[OHCE] human gut metagenome; feces
2593
2518
-
Ala
CGC
[ENA]
¢þ
>WENV182078658
OHGA01004925
[OHGA] human gut metagenome; feces
358
433
+
Ala
CGC
[ENA]
¢þ
>WENV182087707
OHGW01022786
[OHGW] human gut metagenome; feces
434
509
+
Ala
CGC
[ENA]
¢þ
>WENV182101940
OHHU01006012
[OHHU] human gut metagenome; feces
1157
1082
-
Ala
CGC
[ENA]
¢þ
>WENV182109511
OHIN01000758
[OHIN] human gut metagenome; feces
8651
8576
-
Ala
CGC
[ENA]
¢þ
>WENV182112584
OHIU01023557
[OHIU] human gut metagenome; feces
538
463
-
Ala
CGC
[ENA]
¢þ
>WENV182118592
OHJG01001774
[OHJG] human gut metagenome; feces
2725
2650
-
Ala
CGC
[ENA]
¢þ
>WENV182120370
OHJJ01008742
[OHJJ] human gut metagenome; feces
446
371
-
Ala
CGC
[ENA]
¢þ
>WENV182128852
OHJY01045526
[OHJY] human gut metagenome; feces
476
551
+
Ala
CGC
[ENA]
¢þ
>WENV182189586
OHOO01014732
[OHOO] human gut metagenome; feces
157
82
-
Ala
CGC
[ENA]
¢þ
>WENV182192690
OHOZ01037186
[OHOZ] human gut metagenome; feces
228
153
-
Ala
CGC
[ENA]
¢þ
>WENV182198115
OHPI01001074
[OHPI] human gut metagenome; feces
6224
6149
-
Ala
CGC
[ENA]
¢þ
>WENV182225705
OHRD01027052
[OHRD] human gut metagenome; feces
529
454
-
Ala
CGC
[ENA]
¢þ
>WENV182253259
OHTA01000956
[OHTA] human gut metagenome; feces
11186
11261
+
Ala
CGC
[ENA]
¢þ
>WENV182257452
OHTF01024568
[OHTF] human gut metagenome; feces
571
496
-
Ala
CGC
[ENA]
¢þ
>WENV182326008
OHYU01001836
[OHYU] human gut metagenome; feces
4245
4170
-
Ala
CGC
[ENA]
¢þ
>WENV182332151
OHZJ01004386
[OHZJ] human gut metagenome; feces
1749
1674
-
Ala
CGC
[ENA]
¢þ
>WENV182384167
OIDU01001887
[OIDU] human gut metagenome; feces
3901
3976
+
Ala
CGC
[ENA]
¢þ
>WENV182421035
OIGP01002572
[OIGP] human gut metagenome; human gut
442
517
+
Ala
CGC
[ENA]
¢þ
>WENV182427273
OIHU01000866
[OIHU] human gut metagenome; human gut
2867
2792
-
Ala
CGC
[ENA]
¢þ
>WENV182429882
OIID01002219
[OIID] human gut metagenome; human gut
1424
1499
+
Ala
CGC
[ENA]
¢þ
>WENV182431682
OIIJ01000291
[OIIJ] human gut metagenome; human gut
890
965
+
Ala
CGC
[ENA]
¢þ
>WENV182468264
OIOX01029522
[OIOX] human gut metagenome; human gut
189
114
-
Ala
CGC
[ENA]
¢þ
>WENV182479474
OIQT01001295
[OIQT] human gut metagenome; human gut
914
839
-
Ala
CGC
[ENA]
¢þ
>WENV182479906
OIQV01003464
[OIQV] human gut metagenome; human gut
219
294
+
Ala
CGC
[ENA]
¢þ
>WENV182482133
OIRD01009608
[OIRD] human gut metagenome; human gut
534
609
+
Ala
CGC
[ENA]
¢þ
>WENV182496413
OITF01007935
[OITF] human gut metagenome; human gut
345
420
+
Ala
CGC
[ENA]
¢þ
>WENV182498610
OITP01001519
[OITP] human gut metagenome; human gut
1415
1490
+
Ala
CGC
[ENA]
¢þ
>WENV182499496
OITT01005336
[OITT] human gut metagenome; human gut
996
1071
+
Ala
CGC
[ENA]
¢þ
>WENV182501772
OIUE01007095
[OIUE] human gut metagenome; human gut
90
165
+
Ala
CGC
[ENA]
¢þ
>WENV182507109
OIVJ01004344
[OIVJ] human gut metagenome; human gut
597
672
+
Ala
CGC
[ENA]
¢þ
>WENV182529467
OIWU01059204
[OIWU] human gut metagenome; faeces
886
961
+
Ala
CGC
[ENA]
¢þ
>WENV182533694
OIXA01051805
[OIXA] human gut metagenome; faeces
766
691
-
Ala
CGC
[ENA]
¢þ
>WENV182538444
OIXH01112741
[OIXH] human gut metagenome; faeces
133
58
-
Ala
CGC
[ENA]
¢þ
>WENV182539841
OIXV01020696
[OIXV] human gut metagenome; faeces
1098
1023
-
Ala
CGC
[ENA]
¢þ
>WENV182639500
OJLA01080937
[OJLA] metagenome; faeces
209
284
+
Ala
CGC
[ENA]
¢þ
>WENV182669717
OJNK01000581
[OJNK] human gut metagenome; human gut
12313
12388
+
Ala
CGC
[ENA]
¢þ
>WENV182673170
OJNO01000937
[OJNO] human gut metagenome; human gut
9054
9129
+
Ala
CGC
[ENA]
¢þ
>WENV182684272
OJNX01073591
[OJNX] human gut metagenome; human gut
127
52
-
Ala
CGC
[ENA]
¢þ
>WENV182685221
OJNY01016880
[OJNY] human gut metagenome; human gut
782
707
-
Ala
CGC
[ENA]
¢þ
>WENV182686960
OJNZ01083422
[OJNZ] human gut metagenome; human gut
457
532
+
Ala
CGC
[ENA]
¢þ
>WENV182687954
OJOA01031521
[OJOA] human gut metagenome; human gut
676
601
-
Ala
CGC
[ENA]
¢þ
>WENV182711352
OJPD01027047
[OJPD] human gut metagenome; stool sample
191
116
-
Ala
CGC
[ENA]
¢þ
>WENV182717500
OJPL01000025
[OJPL] human gut metagenome; stool sample
23397
23472
+
Ala
CGC
[ENA]
¢þ
>WENV182727223
OJPV01005103
[OJPV] human gut metagenome; stool sample
1163
1088
-
Ala
CGC
[ENA]
¢þ
>WENV182766785
OJRU01002988
[OJRU] human gut metagenome; stool sample
1897
1822
-
Ala
CGC
[ENA]
¢þ
>WENV182781652
OJSE01007575
[OJSE] human gut metagenome; human gut
2865
2790
-
Ala
CGC
[ENA]
¢þ
>WENV182802876
OJUG01081615
[OJUG] human gut metagenome; human gut
12
87
+
Ala
CGC
[ENA]
¢þ
>WENV182903049
OKSX01000964
[OKSX] human gut metagenome; feces
9770
9845
+
Ala
CGC
[ENA]
¢þ
>WENV182930643
OKUR01004460
[OKUR] human gut metagenome; feces
2713
2638
-
Ala
CGC
[ENA]
¢þ
>WENV182977508
OKYE01001015
[OKYE] human gut metagenome; human gut
2173
2248
+
Ala
CGC
[ENA]
¢þ
>WENV182978714
OKYI01018734
[OKYI] human gut metagenome; human gut
165
90
-
Ala
CGC
[ENA]
¢þ
>WENV182983345
OKZF01001870
[OKZF] human gut metagenome; human gut
1616
1541
-
Ala
CGC
[ENA]
¢þ
>WENV182986128
OKZU01005679
[OKZU] human gut metagenome; human gut
453
378
-
Ala
CGC
[ENA]
¢þ
>WENV183037354
OLGA01018769
[OLGA] human gut metagenome; faeces
251
326
+
Ala
CGC
[ENA]
¢þ
>WENV183071800
OLIS01049090
[OLIS] human gut metagenome; feces
292
217
-
Ala
CGC
[ENA]
¢þ
>WENV183099444
OLNF01007978
[OLNF] human gut metagenome; faeces
2104
2029
-
Ala
CGC
[ENA]
¢þ
>WENV183177524
OLPG01001833
[OLPG] human gut metagenome; faeces
1986
2061
+
Ala
CGC
[ENA]
¢þ
>WENV183185587
OLPN01014522
[OLPN] human gut metagenome; faeces
2103
2028
-
Ala
CGC
[ENA]
¢þ
>WENV183198836
OLPV01005473
[OLPV] human gut metagenome; faeces
3899
3974
+
Ala
CGC
[ENA]
¢þ
>WENV183278804
OLSA01052843
[OLSA] human gut metagenome; faeces
538
613
+
Ala
CGC
[ENA]
¢þ
>WENV183290085
OLSG01067455
[OLSG] human gut metagenome; faeces
276
201
-
Ala
CGC
[ENA]
¢þ
>WENV183295780
OLSL01003544
[OLSL] human gut metagenome; faeces
2859
2784
-
Ala
CGC
[ENA]
¢þ
>WENV183304316
OLSQ01030153
[OLSQ] human gut metagenome; faeces
516
591
+
Ala
CGC
[ENA]
¢þ
>WENV183311418
OLVO01007185
[OLVO] human gut metagenome; faeces
4056
4131
+
Ala
CGC
[ENA]
¢þ
>WENV183326651
OLVZ01031300
[OLVZ] human gut metagenome; faeces
121
46
-
Ala
CGC
[ENA]
¢þ
>WENV183377985
OLYB01124092
[OLYB] human gut metagenome; feces
396
321
-
Ala
CGC
[ENA]
¢þ
>WENV183379506
OLYC01032651
[OLYC] human gut metagenome; feces
728
803
+
Ala
CGC
[ENA]
¢þ
>WENV183387598
OLYY01000541
[OLYY] human gut metagenome; feces
4842
4767
-
Ala
CGC
[ENA]
¢þ
>WENV183396023
OLZI01001604
[OLZI] human gut metagenome; feces
7057
7132
+
Ala
CGC
[ENA]
¢þ
>WENV183402697
OLZV01002047
[OLZV] human gut metagenome; feces
3925
4000
+
Ala
CGC
[ENA]
¢þ
>WENV183405099
OLZZ01001270
[OLZZ] human gut metagenome; feces
1183
1108
-
Ala
CGC
[ENA]
¢þ
>WENV183414351
OMAO01024527
[OMAO] human gut metagenome; feces
307
382
+
Ala
CGC
[ENA]
¢þ
>WENV183418800
OMAY01011906
[OMAY] human gut metagenome; feces
535
610
+
Ala
CGC
[ENA]
¢þ
>WENV183425859
OMBL01000410
[OMBL] human gut metagenome; feces
10327
10402
+
Ala
CGC
[ENA]
¢þ
>WENV183431694
OMBQ01017187
[OMBQ] human gut metagenome; feces
371
446
+
Ala
CGC
[ENA]
¢þ
>WENV183439641
OMCG01001309
[OMCG] human gut metagenome; feces
9242
9317
+
Ala
CGC
[ENA]
¢þ
>WENV183457208
OMDL01002067
[OMDL] human gut metagenome; feces
2105
2030
-
Ala
CGC
[ENA]
¢þ
>WENV183490434
OMGB01010932
[OMGB] human gut metagenome; feces
517
442
-
Ala
CGC
[ENA]
¢þ
>WENV183500898
OMGR01001125
[OMGR] human gut metagenome; human gut
7075
7150
+
Ala
CGC
[ENA]
¢þ
>WENV183506965
OMGY01004869
[OMGY] human gut metagenome; human gut
5853
5928
+
Ala
CGC
[ENA]
¢þ
>WENV183549240
OOAZ01000381
[OOAZ] human gut metagenome; human gut
14634
14559
-
Ala
CGC
[ENA]
¢þ
>WENV183574474
OOCH01016192
[OOCH] human gut metagenome; human gut
4
79
+
Ala
CGC
[ENA]
¢þ
>WENV183595998
OODD01004783
[OODD] human gut metagenome; human gut
1355
1430
+
Ala
CGC
[ENA]
¢þ
>WENV183632861
OOIF01029604
[OOIF] human gut metagenome; human gut
522
447
-
Ala
CGC
[ENA]
¢þ
>WENV183641945
OQVL01109318
[OQVL] human gut metagenome; human gut
172
97
-
Ala
CGC
[ENA]
¢þ
>WENV183646955
OQVR01030938
[OQVR] human gut metagenome; human gut
118
43
-
Ala
CGC
[ENA]
¢þ
>WENV183648676
OQVS01026150
[OQVS] human gut metagenome; human gut
146
71
-
Ala
CGC
[ENA]
¢þ
>WENV183650050
OQVT01009976
[OQVT] human gut metagenome; human gut
4394
4469
+
Ala
CGC
[ENA]
¢þ
>WENV183657335
OQWI01008115
[OQWI] human gut metagenome; human gut
962
1037
+
Ala
CGC
[ENA]
¢þ
>WENV183659961
OQWM01086572
[OQWM] human gut metagenome; human gut
117
42
-
Ala
CGC
[ENA]
¢þ
>WENV183787444
PPYF01326138
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1258
1183
-
Ala
CGC
[ENA]
¢þ
>WENV170086166
CEAB01076044
[CEAB] gut metagenome; human stools
2100
2025
-
Ala
CGC
[ENA]
¢þ
>WENV170088504
CEAE01008189
[CEAE] gut metagenome; human stools
1635
1710
+
Ala
CGC
[ENA]
¢þ
>WENV170095007
CEAI01015509
[CEAI] gut metagenome; human stools
1235
1310
+
Ala
CGC
[ENA]
¢þ
>WENV170109001
CECA01056645
[CECA] gut metagenome; human stools
109
34
-
Ala
CGC
[ENA]
¢þ
>WENV170111521
CECJ01008686
[CECJ] gut metagenome; human stools
2090
2015
-
Ala
CGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK