tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.189915 (94 seq.)
>W1711009599 LQQU01000026 Betaproteobacteria Crenobacter luteus [LQQU] 1759 1835 + Ile GAT [ENA] ¡û
>W1712110326 NJGV01000018 Betaproteobacteria Herbaspirillum aquaticum [NJGV] 3591 3515 - Ile GAT [ENA] ¡û
>C171094895 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 428366 428442 + Ile GAT - ¡û
>C171094932 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 3440800 3440724 - Ile GAT - ¡û
>C171094936 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 2668114 2668038 - Ile GAT - ¡û
>C171094938 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 2471548 2471472 - Ile GAT - ¡û
>C171094945 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 2141086 2141010 - Ile GAT - ¡û
>WENV180284334 OBID01030561 [OBID] metagenome; sludge 312 388 + Ile GAT [ENA] ¢þ
>WENV180299292 OBJC01000448 [OBJC] metagenome; water 921 997 + Ile GAT [ENA] ¢þ
>WENV180315470 OBKH01102236 [OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature 245 169 - Ile GAT [ENA] ¢þ
>WENV180342391 OBLJ01014148 [OBLJ] soil metagenome; Clay 97 173 + Ile GAT [ENA] ¢þ
>WENV180647885 OCSI01019166 [OCSI] metagenome; diffuse fluid 189 265 + Ile GAT [ENA] ¢þ
>WENV181209478 OFBE01004168 [OFBE] metagenome; hydrothermal vent 187 263 + Ile GAT [ENA] ¢þ
>WENV181210655 OFBH01019395 [OFBH] metagenome; hydrothermal vent 137 213 + Ile GAT [ENA] ¢þ
>WENV181293842 OFHG01029449 [OFHG] soil metagenome; Clay 280 356 + Ile GAT [ENA] ¢þ
>WENV181297754 OFHK01123467 [OFHK] soil metagenome; Clay 100 176 + Ile GAT [ENA] ¢þ
>WENV181309616 OFIW01013648 [OFIW] marine metagenome; seawater 332 408 + Ile GAT [ENA] ¢þ
>WENV181315466 OFJP01000071 [OFJP] marine metagenome; seawater 2547 2471 - Ile GAT [ENA] ¢þ
>WENV181378348 OFRB01001094 [OFRB] wastewater metagenome; Exp Tend CN 0WW 2451 2527 + Ile GAT [ENA] ¢þ
>WENV181378825 OFRC01000862 [OFRC] wastewater metagenome; Exp Tend CN 10WW 449 525 + Ile GAT [ENA] ¢þ
>WENV181380436 OFRD01090331 [OFRD] wastewater metagenome; Exp Tend CN 100WW 363 439 + Ile GAT [ENA] ¢þ
>WENV181381661 OFRF01001306 [OFRF] wastewater metagenome; Exp Tend CN 50WW 2581 2505 - Ile GAT [ENA] ¢þ
>WENV181844676 OGVW01017701 [OGVW] freshwater metagenome; freshwater 247 323 + Ile GAT [ENA] ¢þ
>WENV181848374 OGVZ01006201 [OGVZ] freshwater metagenome; freshwater 206 130 - Ile GAT [ENA] ¢þ
>W141216163 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 455696 455772 + Ile GAT [ENA] ¡û
>W141216172 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 1712032 1712108 + Ile GAT [ENA] ¡û
>W141216199 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 4153277 4153201 - Ile GAT [ENA] ¡û
>W141216201 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 4116752 4116676 - Ile GAT [ENA] ¡û
>W141216206 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 3519995 3519919 - Ile GAT [ENA] ¡û
>W141216214 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 3208903 3208827 - Ile GAT [ENA] ¡û
>W141216216 AZUR01000001 Betaproteobacteria Pseudogulbenkiania sp. MAI-1 [AZUR] 3123015 3122939 - Ile GAT [ENA] ¡û
>WENV183060064 OLHW01007541 [OLHW] seawater metagenome; Sea water 255 331 + Ile GAT [ENA] ¢þ
>WENV183703705 PDVJ01037001 [PDVJ] alkali sediment metagenome; glacial lake sediment 313 389 + Ile GAT [ENA] ¢þ
>WENV183735209 PJUA01003097 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 1955 2031 + Ile GAT [ENA] ¢þ
>WENV170303923 CESI01003651 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 117 193 + Ile GAT [ENA] ¢þ
>WENV170306285 CESJ01020571 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 114 190 + Ile GAT [ENA] ¢þ
>WENV170325354 CEST01013442 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 240 316 + Ile GAT [ENA] ¢þ
>WENV170495870 CEVS01004979 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 911 835 - Ile GAT [ENA] ¢þ
>WENV170557695 CXWL01034333 [CXWL] groundwater metagenome; biofilm material 195 271 + Ile GAT [ENA] ¢þ
>WENV170661757 JXWV01109564 [JXWV] soil metagenome; rice field; organic FYM Plot 364 288 - Ile GAT [ENA] ¢þ
>WENV170669107 LAHR01009683 [LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over 111 187 + Ile GAT [ENA] ¢þ
>C181187747 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 5594045 5594121 + Ile GAT - ¡û
>C181187749 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 5618850 5618926 + Ile GAT - ¡û
>C181187762 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 4443269 4443193 - Ile GAT - ¡û
>C181187764 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 4432580 4432504 - Ile GAT - ¡û
>C181187766 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 4407671 4407595 - Ile GAT - ¡û
>C181187769 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 3761411 3761335 - Ile GAT - ¡û
>C181187772 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 2775115 2775039 - Ile GAT - ¡û
>C191004586 AP018738 Betaproteobacteria Ferriphaselus amnicola OYT1 [AP018738] 2624493 2624417 - Ile GAT - ¡û
>C191004599 AP018738 Betaproteobacteria Ferriphaselus amnicola OYT1 [AP018738] 1631907 1631831 - Ile GAT - ¡û
>C191004603 AP018738 Betaproteobacteria Ferriphaselus amnicola OYT1 [AP018738] 1497364 1497288 - Ile GAT - ¡û
>C191083661 CP031968 Betaproteobacteria Chromobacterium rhizoryzae JP2-74 [CP031968] 164257 164333 + Ile GAT - ¡û
>C191083674 CP031968 Betaproteobacteria Chromobacterium rhizoryzae JP2-74 [CP031968] 1184329 1184405 + Ile GAT - ¡û
>C191083729 CP031968 Betaproteobacteria Chromobacterium rhizoryzae JP2-74 [CP031968] 3545316 3545240 - Ile GAT - ¡û
>W09125844 ACIS01000017 Betaproteobacteria Pseudogulbenkiania ferrooxidans 2002 [ACIS] 29348 29272 - Ile GAT [ENA] ¡û
>W09134971 ACVF01000013 Betaproteobacteria Sideroxydans lithotrophicus ES-1 [ACVF] 1913 1989 + Ile GAT [ENA] ¡û
>W141817322 JQKP01000002 Betaproteobacteria Ferriphaselus sp. R-1 [JQKP] 400906 400982 + Ile GAT [ENA] ¡û
>W141817341 JQKP01000012 Betaproteobacteria Ferriphaselus sp. R-1 [JQKP] 82977 82901 - Ile GAT [ENA] ¡û
>W141817349 JQKP01000018 Betaproteobacteria Ferriphaselus sp. R-1 [JQKP] 3594 3518 - Ile GAT [ENA] ¡û
>W141817351 JQKP01000019 Betaproteobacteria Ferriphaselus sp. R-1 [JQKP] 1960 2036 + Ile GAT [ENA] ¡û
>W1910647308 LXRL01000051 Betaproteobacteria Chromobacterium haemolyticum IR17 [LXRL] 3508 3432 - Ile GAT [ENA] ¡û
>W1911802720 QYUN01000002 Betaproteobacteria Noviherbaspirillum cavernae K2R10-39 [QYUN] 393059 393135 + Ile GAT [ENA] ¡û
>W1911802751 QYUN01000002 Betaproteobacteria Noviherbaspirillum cavernae K2R10-39 [QYUN] 3299893 3299817 - Ile GAT [ENA] ¡û
>W1911802768 QYUN01000003 Betaproteobacteria Noviherbaspirillum cavernae K2R10-39 [QYUN] 618192 618268 + Ile GAT [ENA] ¡û
>W1810659771 QJKI01000043 Betaproteobacteria Rivihabitans pingtungensis DSM 29661 [QJKI] 3719 3643 - Ile GAT [ENA] ¡û
>W1810887540 QUQN01000010 Betaproteobacteria Herbaspirillum sp. 3R-3a1 [QUQN] 2104 2180 + Ile GAT [ENA] ¡û
>C151092610 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 5007740 5007816 + Ile GAT - ¡û
>C151092612 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 5015658 5015734 + Ile GAT - ¡û
>C151092614 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 5021812 5021888 + Ile GAT - ¡û
>C151092633 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 3730261 3730185 - Ile GAT - ¡û
>C151092635 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 3704914 3704838 - Ile GAT - ¡û
>C151092637 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 3677606 3677530 - Ile GAT - ¡û
>C151092640 CP012201 Betaproteobacteria Massilia sp. NR 4-1 [CP012201] 2827099 2827023 - Ile GAT - ¡û
>SRA1046226 SRR035093.257246 454 Sequencing (SRP001814) 80 156 + Ile GAT [SRA]
>SRA1046955 SRR035093.425556 454 Sequencing (SRP001814) 191 267 + Ile GAT [SRA]
>W1510017320 BBTH01000019 Betaproteobacteria Ferriphaselus amnicola OYT1 [BBTH] 1924 2000 + Ile GAT [ENA] ¡û
>W10111520 ADDK01000038 Betaproteobacteria Azospira oryzae PS [ADDK] 222 146 - Ile GAT [ENA] ¡û
>C10107797 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 521296 521372 + Ile GAT [Ensembl] ¡û
>C10107818 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 5431774 5431698 - Ile GAT [Ensembl] ¡û
>C10107823 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 4446483 4446407 - Ile GAT [Ensembl] ¡û
>C10111851 CP001965 Betaproteobacteria Sideroxydans lithotrophicus ES-1 [CP001965] 359045 359121 + Ile GAT [Ensembl] ¡û
>C10111880 CP001965 Betaproteobacteria Sideroxydans lithotrophicus ES-1 [CP001965] 1926700 1926624 - Ile GAT [Ensembl] ¡û
>W1511640617 LDUI01000087 Betaproteobacteria Chromobacterium sp. LK1 [LDUI] 399 323 - Ile GAT [ENA] ¡û
>W1511641321 LDUR01000069 Betaproteobacteria Chromobacterium sp. LK11 [LDUR] 358 282 - Ile GAT [ENA] ¡û
>W1511678899 LFDT01000055 Betaproteobacteria Vogesella sp. EB [LFDT] 3532 3456 - Ile GAT [ENA] ¡û
>C121000511 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 459149 459225 + Ile GAT [Ensembl] ¡û
>C121000520 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 1690226 1690302 + Ile GAT [Ensembl] ¡û
>C121000550 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 4151278 4151202 - Ile GAT [Ensembl] ¡û
>C121000552 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 4119936 4119860 - Ile GAT [Ensembl] ¡û
>C121000557 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 3584227 3584151 - Ile GAT [Ensembl] ¡û
>C121000569 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 3295614 3295538 - Ile GAT [Ensembl] ¡û
>C121000571 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 3212419 3212343 - Ile GAT [Ensembl] ¡û
>C121000575 AP012224 Betaproteobacteria Pseudogulbenkiania sp. NH8B [AP012224] 2883380 2883304 - Ile GAT [Ensembl] ¡û
>W1610858119 LQQU01000026 Betaproteobacteria Crenobacter luteus [LQQU] 1759 1835 + Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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